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The map label for this gene is ybhS [H]

Identifier: 150007972

GI number: 150007972

Start: 1551464

End: 1552549

Strand: Reverse

Name: ybhS [H]

Synonym: BDI_1333

Alternate gene names: 150007972

Gene position: 1552549-1551464 (Counterclockwise)

Preceding gene: 150007973

Following gene: 150007971

Centisome position: 32.27

GC content: 51.38

Gene sequence:

>1086_bases
ATGAAACAATTCATATCCTTTGTTAGAAAGGAGTTCTATCACATTTTCAGGGACGCACGCACGACAATGATCCTCTTGCT
CATGCCCGTCATCCTGATCATCTTGTTCGGATATGCCATCACGACCGAGATCAAGCGTGTGCCGATCGCTATTTTCGACC
AAAGCCGGGATGAGCTGACACTGAAGATGGCAGACCGCTTGAATGCCAGCGAGTACTTCGAGCTGTATACGACCGTCGAT
AGCTATGAGGACGCCGGGGCCTTGTTTCGGCAAGGAAAGGTACACGTCATAGTTGTCTTTCCCCCTCAATACGCTTCCAC
GGCCGATGCCCAAGTACAAGTCTTGGCGGACGCTACCGATCCGAACGAGGCGACTCAGCTAATCGCTTATTGTTCGGCGA
TCATCGCGGAGCAGTTGAAAGGCGAGTCGGCGGTTGAGAGTAAAGCCGTGACCCCGGTTACCACTTTGCTCTACAACCCT
CAAATGAAAGGCGCCTACAACTTCGTGCCCGGCGTAATGGGTTTGATCTTGATCCTTATATGCGCCATGATGACCTCGAT
CGGCATCGTGAAAGAGAAGGAGATGGGAACGATGGAAGTCCTGCTGGTCTCCCCGTTGAAACCCATCTACATCATTCTGG
CCAAGGCGATCCCATACCTATTGCTGAGTATGGTGAATATCGCTACGATCTTGCTGCTATCCTATTTCCTGCTGGACGTT
CCGATAAAAGGCAGCCTGCTGTTGCTGGTTTCCGTGTCCATCCTGTATGCGATCGTATCCCTCTGTCTGGGCCTGCTGAT
CTCCACGGTAGCCGATACCCAGCAGGCGGCTATGTTGATCAGCGGTATCGCCTTGATGCTTCCGATCATGTTGTTGAGCG
GCATGATGTTCCCGATAGAGAATATGCCGGATATCCTGCGATGGTTCTCCCATATCGTTCCGGCCAAATGGTATATCATC
GCCGTGAAGGACGTGATGATCAAGGGGCTTCCCGCCGTGTCGATCTTGAAGGAGATCGGGATACTGTCGTTCATGGCGGT
CGTGCTGGTATTCTTGAGTGTGAAACGTTTTAAAATACGATTATAA

Upstream 100 bases:

>100_bases
GTTAGACAGTCCCTCCGCCTTGAAGCGGGATTTTAAGACAACGAATATGAACCAAGTCTTCCACGCCTTGGCTCGAAAAG
CAACGAGAGGAGAATAAACG

Downstream 100 bases:

>100_bases
GCTATGTTACGATATTTGTTAGAGAAAGAGTTCAAGCAGATCCGTCGGGACCGGTTCATGCCGAAGATTATCTTCATCAT
CCCGATCATGCAGTTGATCA

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKQFISFVRKEFYHIFRDARTTMILLLMPVILIILFGYAITTEIKRVPIAIFDQSRDELTLKMADRLNASEYFELYTTVD
SYEDAGALFRQGKVHVIVVFPPQYASTADAQVQVLADATDPNEATQLIAYCSAIIAEQLKGESAVESKAVTPVTTLLYNP
QMKGAYNFVPGVMGLILILICAMMTSIGIVKEKEMGTMEVLLVSPLKPIYIILAKAIPYLLLSMVNIATILLLSYFLLDV
PIKGSLLLLVSVSILYAIVSLCLGLLISTVADTQQAAMLISGIALMLPIMLLSGMMFPIENMPDILRWFSHIVPAKWYII
AVKDVMIKGLPAVSILKEIGILSFMAVVLVFLSVKRFKIRL

Sequences:

>Translated_361_residues
MKQFISFVRKEFYHIFRDARTTMILLLMPVILIILFGYAITTEIKRVPIAIFDQSRDELTLKMADRLNASEYFELYTTVD
SYEDAGALFRQGKVHVIVVFPPQYASTADAQVQVLADATDPNEATQLIAYCSAIIAEQLKGESAVESKAVTPVTTLLYNP
QMKGAYNFVPGVMGLILILICAMMTSIGIVKEKEMGTMEVLLVSPLKPIYIILAKAIPYLLLSMVNIATILLLSYFLLDV
PIKGSLLLLVSVSILYAIVSLCLGLLISTVADTQQAAMLISGIALMLPIMLLSGMMFPIENMPDILRWFSHIVPAKWYII
AVKDVMIKGLPAVSILKEIGILSFMAVVLVFLSVKRFKIRL
>Mature_361_residues
MKQFISFVRKEFYHIFRDARTTMILLLMPVILIILFGYAITTEIKRVPIAIFDQSRDELTLKMADRLNASEYFELYTTVD
SYEDAGALFRQGKVHVIVVFPPQYASTADAQVQVLADATDPNEATQLIAYCSAIIAEQLKGESAVESKAVTPVTTLLYNP
QMKGAYNFVPGVMGLILILICAMMTSIGIVKEKEMGTMEVLLVSPLKPIYIILAKAIPYLLLSMVNIATILLLSYFLLDV
PIKGSLLLLVSVSILYAIVSLCLGLLISTVADTQQAAMLISGIALMLPIMLLSGMMFPIENMPDILRWFSHIVPAKWYII
AVKDVMIKGLPAVSILKEIGILSFMAVVLVFLSVKRFKIRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=329, Percent_Identity=30.3951367781155, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI48994943, Length=345, Percent_Identity=29.2753623188406, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787010, Length=331, Percent_Identity=28.7009063444109, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI226510979, Length=324, Percent_Identity=23.7654320987654, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725260, Length=392, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI85725262, Length=392, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24650855, Length=388, Percent_Identity=20.6185567010309, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=388, Percent_Identity=20.6185567010309, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40068; Mature: 40068

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFISFVRKEFYHIFRDARTTMILLLMPVILIILFGYAITTEIKRVPIAIFDQSRDELT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
LKMADRLNASEYFELYTTVDSYEDAGALFRQGKVHVIVVFPPQYASTADAQVQVLADATD
HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCC
PNEATQLIAYCSAIIAEQLKGESAVESKAVTPVTTLLYNPQMKGAYNFVPGVMGLILILI
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
CAMMTSIGIVKEKEMGTMEVLLVSPLKPIYIILAKAIPYLLLSMVNIATILLLSYFLLDV
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIKGSLLLLVSVSILYAIVSLCLGLLISTVADTQQAAMLISGIALMLPIMLLSGMMFPIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NMPDILRWFSHIVPAKWYIIAVKDVMIKGLPAVSILKEIGILSFMAVVLVFLSVKRFKIR
CCHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MKQFISFVRKEFYHIFRDARTTMILLLMPVILIILFGYAITTEIKRVPIAIFDQSRDELT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHH
LKMADRLNASEYFELYTTVDSYEDAGALFRQGKVHVIVVFPPQYASTADAQVQVLADATD
HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCC
PNEATQLIAYCSAIIAEQLKGESAVESKAVTPVTTLLYNPQMKGAYNFVPGVMGLILILI
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
CAMMTSIGIVKEKEMGTMEVLLVSPLKPIYIILAKAIPYLLLSMVNIATILLLSYFLLDV
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIKGSLLLLVSVSILYAIVSLCLGLLISTVADTQQAAMLISGIALMLPIMLLSGMMFPIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NMPDILRWFSHIVPAKWYIIAVKDVMIKGLPAVSILKEIGILSFMAVVLVFLSVKRFKIR
CCHHHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]