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The map label for this gene is ybhR [H]

Identifier: 150007971

GI number: 150007971

Start: 1550369

End: 1551460

Strand: Reverse

Name: ybhR [H]

Synonym: BDI_1332

Alternate gene names: 150007971

Gene position: 1551460-1550369 (Counterclockwise)

Preceding gene: 150007972

Following gene: 150007970

Centisome position: 32.25

GC content: 50.64

Gene sequence:

>1092_bases
ATGTTACGATATTTGTTAGAGAAAGAGTTCAAGCAGATCCGTCGGGACCGGTTCATGCCGAAGATTATCTTCATCATCCC
GATCATGCAGTTGATCATCTTGCCTTTCGCCGCTAATTTCGAGATGCGAAATATTAACCTTAGCATCGTGGACAATGATC
ATTCCGTCACCTCCATGCAATTGGTAGATAAGGTACTATCCTCCGGATATTTCCGCCTGACAGACCGGTCGGATCGTTAC
GACGAGGCGCTGACCTCGGTGGAGAGCAATGAGTCCGATATCATTCTGGAAATCCCCTCTGATTTCGAGCGGGACTTGGG
GAAGGAGGGCAGGGCGGACGTGATGATCGCCGCTAACGCCGTGAACGGAACCAAGGGCGGCTTGGGTAGCTCCTACCTCT
CCTCGATTATACAGGATTTCAATAGGGAGAAAGGTTTCGCCTCTATGGGATCGGGCAGGGGAGTGGCTTCGATTAACCTG
TTCAATCCCCACTTGAGCTACAAGATCTATATGGTTCCCGGCATCATGGTATTCTTGCTGACGATTATCGGGGGATCGAT
CTCCGCCTTGAATATCGTGAGCGAGAAGGAGAAAGGGACGATCGAGCAGATAAACGTCTCGCCCGTACCCAAGTCCCTGT
TCCTGCTGTCGAAGCTGATCCCTTTCTGGGTGATAGGCTTTGTCCTGCTGACGGTGGCGATCCTCATCGCTTGGCTGATC
TACGGCTTGGTGCCGGAGGGGAGTTTCGGGGTGATCTATTTGTTCGCCGCCGTATATTTGATCGCTTTTACGGGATTTGG
CTTGGCGATCTCCTCCTTCTCGTCCACGCAGCAACAAGCGATGCTTACGGCGTTTTTCTTCTTGATCATTTTCGCCTTGC
TAAGCGGATTGTTCACGCCGATCAGCAGTATGCCGGAATGGGCGCAGAAGATCACGCTGGCGAACCCGGTGCGTTATTTC
GTGGAGGTGATGCGTATGGTCTATTTAAAGGGGAGCGGCTTTGCCGATTTACGGGGACATTTTGTGATTGTCTGTCTATT
TGCTGTTTTTTTTAATCTGTTAGCGGTAATTAGTTATCGTAAAAAGGGGTAG

Upstream 100 bases:

>100_bases
TCCCGCCGTGTCGATCTTGAAGGAGATCGGGATACTGTCGTTCATGGCGGTCGTGCTGGTATTCTTGAGTGTGAAACGTT
TTAAAATACGATTATAAGCT

Downstream 100 bases:

>100_bases
TTCGGAAATAAATGTTTTCTTTGTATCCCGTTTACGGATTATAAACTAATACAGCGAAAAAACATGTCATTTATCATTGT
CGTACTTTGTTTGGCCTTAT

Product: putative ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLRYLLEKEFKQIRRDRFMPKIIFIIPIMQLIILPFAANFEMRNINLSIVDNDHSVTSMQLVDKVLSSGYFRLTDRSDRY
DEALTSVESNESDIILEIPSDFERDLGKEGRADVMIAANAVNGTKGGLGSSYLSSIIQDFNREKGFASMGSGRGVASINL
FNPHLSYKIYMVPGIMVFLLTIIGGSISALNIVSEKEKGTIEQINVSPVPKSLFLLSKLIPFWVIGFVLLTVAILIAWLI
YGLVPEGSFGVIYLFAAVYLIAFTGFGLAISSFSSTQQQAMLTAFFFLIIFALLSGLFTPISSMPEWAQKITLANPVRYF
VEVMRMVYLKGSGFADLRGHFVIVCLFAVFFNLLAVISYRKKG

Sequences:

>Translated_363_residues
MLRYLLEKEFKQIRRDRFMPKIIFIIPIMQLIILPFAANFEMRNINLSIVDNDHSVTSMQLVDKVLSSGYFRLTDRSDRY
DEALTSVESNESDIILEIPSDFERDLGKEGRADVMIAANAVNGTKGGLGSSYLSSIIQDFNREKGFASMGSGRGVASINL
FNPHLSYKIYMVPGIMVFLLTIIGGSISALNIVSEKEKGTIEQINVSPVPKSLFLLSKLIPFWVIGFVLLTVAILIAWLI
YGLVPEGSFGVIYLFAAVYLIAFTGFGLAISSFSSTQQQAMLTAFFFLIIFALLSGLFTPISSMPEWAQKITLANPVRYF
VEVMRMVYLKGSGFADLRGHFVIVCLFAVFFNLLAVISYRKKG
>Mature_363_residues
MLRYLLEKEFKQIRRDRFMPKIIFIIPIMQLIILPFAANFEMRNINLSIVDNDHSVTSMQLVDKVLSSGYFRLTDRSDRY
DEALTSVESNESDIILEIPSDFERDLGKEGRADVMIAANAVNGTKGGLGSSYLSSIIQDFNREKGFASMGSGRGVASINL
FNPHLSYKIYMVPGIMVFLLTIIGGSISALNIVSEKEKGTIEQINVSPVPKSLFLLSKLIPFWVIGFVLLTVAILIAWLI
YGLVPEGSFGVIYLFAAVYLIAFTGFGLAISSFSSTQQQAMLTAFFFLIIFALLSGLFTPISSMPEWAQKITLANPVRYF
VEVMRMVYLKGSGFADLRGHFVIVCLFAVFFNLLAVISYRKKG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=336, Percent_Identity=28.5714285714286, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI48994943, Length=341, Percent_Identity=24.9266862170088, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787011, Length=338, Percent_Identity=24.5562130177515, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI226510979, Length=328, Percent_Identity=24.390243902439, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40501; Mature: 40501

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYLLEKEFKQIRRDRFMPKIIFIIPIMQLIILPFAANFEMRNINLSIVDNDHSVTSMQ
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHH
LVDKVLSSGYFRLTDRSDRYDEALTSVESNESDIILEIPSDFERDLGKEGRADVMIAANA
HHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEEC
VNGTKGGLGSSYLSSIIQDFNREKGFASMGSGRGVASINLFNPHLSYKIYMVPGIMVFLL
CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHH
TIIGGSISALNIVSEKEKGTIEQINVSPVPKSLFLLSKLIPFWVIGFVLLTVAILIAWLI
HHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLVPEGSFGVIYLFAAVYLIAFTGFGLAISSFSSTQQQAMLTAFFFLIIFALLSGLFTP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSMPEWAQKITLANPVRYFVEVMRMVYLKGSGFADLRGHFVIVCLFAVFFNLLAVISYR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKG
CCC
>Mature Secondary Structure
MLRYLLEKEFKQIRRDRFMPKIIFIIPIMQLIILPFAANFEMRNINLSIVDNDHSVTSMQ
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHH
LVDKVLSSGYFRLTDRSDRYDEALTSVESNESDIILEIPSDFERDLGKEGRADVMIAANA
HHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEEC
VNGTKGGLGSSYLSSIIQDFNREKGFASMGSGRGVASINLFNPHLSYKIYMVPGIMVFLL
CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHH
TIIGGSISALNIVSEKEKGTIEQINVSPVPKSLFLLSKLIPFWVIGFVLLTVAILIAWLI
HHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLVPEGSFGVIYLFAAVYLIAFTGFGLAISSFSSTQQQAMLTAFFFLIIFALLSGLFTP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSMPEWAQKITLANPVRYFVEVMRMVYLKGSGFADLRGHFVIVCLFAVFFNLLAVISYR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]