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The map label for this gene is rhaB [H]

Identifier: 150007962

GI number: 150007962

Start: 1539546

End: 1540967

Strand: Reverse

Name: rhaB [H]

Synonym: BDI_1323

Alternate gene names: 150007962

Gene position: 1540967-1539546 (Counterclockwise)

Preceding gene: 150007964

Following gene: 150007961

Centisome position: 32.03

GC content: 48.45

Gene sequence:

>1422_bases
ATGAAGGAATATAATTTTCTAGCCTTTGATATAGGGGCTACCAGTGGACGGGCCGTGCTCGGGACCTTAAAGGATGCCAA
ATTTGAAATGAAAGAGATCCATCGGTTCCCGAATCCGATGGTGGAATTACACGGACGGTTTTATTGGGATATCTATCATC
TTTATACTTCTCTTATAGAAAGCTTGACGATATGCGCCCGGCAAAGAATCCGGTTGCACTCGATCGGAATAGATACATGG
GGGGTGGATTTTGGGTATGTGGCTTTGGATGGCTCTTTATTGGGCTTACCTCGTGCTTACCGAGATCCTTATACGGACGG
CGCTCCCGAGGACTTTTTCAAACGGATTCCCAAGGAAGAGGTCTATAAGCGGACAGGTATTCAAGTGATGCCGTTTAATA
GCTTGTTCCAGCTTTTCAGGGCGGGGCAAGACTCGTTTATACCGCAGGAAGTGGCGGAAAAGATATTATTCATACCGGAC
CTTTTGGCTTATATGTTGACGGAGCGTATGGTATGTGAATATACGATCGCTTCCACGTCTCAATTATTGAACCCGGAAAC
CCATAAATTCGATTACAAGCTCTTGGAGGCCGTAGGTGTATCTCCTACTTTGATGTGTCCGGTGGTGATGCCGGGGACGT
TGATCGGGCGGTTGAGCGAGTCGATCGCCCGTAAGACAGGAATCGGGGAAATCCCGGTAATCGCCGTGGCTGGTCACGAT
ACGGCGTCGGCGGTAGCCGCTGTTCCTGCTTCTTCTCCTAATTTCGCTTACTTGAGTAGTGGTACTTGGAGCTTGATGGG
TATCGAGGTGGAGAAGCCGATCATCAACGAGGTATCTTTCAAGAATAATTTCACGAATGAGGGGGGTATCGAGGGTACGA
CTCGCTTTTTGAAGAATATTACAGGTATGTGGATCTTGGAACGTTGCCGGGAGCAATGGAAGCGGTCCGGATTGGATTAT
TCGTACGATGATATGGTTCGGATGGCGGAGTTGAGCGAATTTACTTCTTTGATCAATCCGGATGATCCTCGTTTCGCCAA
TCCTGAGAGTATGCTACGTGAGATCACGGCCTATTGTGAGGAAACCGGACAGGCTGTTCCCGCTTCGGACGCCGATTATG
TACATTGTATATTTTATAGCTTGGCGAATCGTTATAAAGAGGTGCTGGAAATACTCAAATCGATGTCGCCACATCCGATT
GAACGATTGCATGTGATAGGTGGTGGCTCTCGGAACGATCTGCTGAATCAGTTGACAGCCAACGCTATCGGTATTCCCGT
ATTGGCAGGCCCGTCTGAGGCGACTGCCATTGGAAATTGCTTGATACAGGCTAAGTCGGCAGGATTACTGACGGATTGTT
GGGAGATGCGAAGACTGATAGCCACCGCATTCCCTCCCAAGGAATTTTATCCGGAAAGGTGA

Upstream 100 bases:

>100_bases
GTTCATGTCAGATTTGAAAGGTTTAAAATCATTTTCGTAAGCAAATATAGCAATAATGCTTCTACTTTTGCTTTCGTCAA
ACAAATAACTTTGTTAAGCC

Downstream 100 bases:

>100_bases
TACACTTTCAAATCATATAAATTTAAAAACATCATACCATGACAAAAGACAGTTTAATTCAACAGGCATTTGAAGTAGCG
GCAGAACGCTATGCGGCCGT

Product: rhamnulose kinase/L-fuculose kinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKEYNFLAFDIGATSGRAVLGTLKDAKFEMKEIHRFPNPMVELHGRFYWDIYHLYTSLIESLTICARQRIRLHSIGIDTW
GVDFGYVALDGSLLGLPRAYRDPYTDGAPEDFFKRIPKEEVYKRTGIQVMPFNSLFQLFRAGQDSFIPQEVAEKILFIPD
LLAYMLTERMVCEYTIASTSQLLNPETHKFDYKLLEAVGVSPTLMCPVVMPGTLIGRLSESIARKTGIGEIPVIAVAGHD
TASAVAAVPASSPNFAYLSSGTWSLMGIEVEKPIINEVSFKNNFTNEGGIEGTTRFLKNITGMWILERCREQWKRSGLDY
SYDDMVRMAELSEFTSLINPDDPRFANPESMLREITAYCEETGQAVPASDADYVHCIFYSLANRYKEVLEILKSMSPHPI
ERLHVIGGGSRNDLLNQLTANAIGIPVLAGPSEATAIGNCLIQAKSAGLLTDCWEMRRLIATAFPPKEFYPER

Sequences:

>Translated_473_residues
MKEYNFLAFDIGATSGRAVLGTLKDAKFEMKEIHRFPNPMVELHGRFYWDIYHLYTSLIESLTICARQRIRLHSIGIDTW
GVDFGYVALDGSLLGLPRAYRDPYTDGAPEDFFKRIPKEEVYKRTGIQVMPFNSLFQLFRAGQDSFIPQEVAEKILFIPD
LLAYMLTERMVCEYTIASTSQLLNPETHKFDYKLLEAVGVSPTLMCPVVMPGTLIGRLSESIARKTGIGEIPVIAVAGHD
TASAVAAVPASSPNFAYLSSGTWSLMGIEVEKPIINEVSFKNNFTNEGGIEGTTRFLKNITGMWILERCREQWKRSGLDY
SYDDMVRMAELSEFTSLINPDDPRFANPESMLREITAYCEETGQAVPASDADYVHCIFYSLANRYKEVLEILKSMSPHPI
ERLHVIGGGSRNDLLNQLTANAIGIPVLAGPSEATAIGNCLIQAKSAGLLTDCWEMRRLIATAFPPKEFYPER
>Mature_473_residues
MKEYNFLAFDIGATSGRAVLGTLKDAKFEMKEIHRFPNPMVELHGRFYWDIYHLYTSLIESLTICARQRIRLHSIGIDTW
GVDFGYVALDGSLLGLPRAYRDPYTDGAPEDFFKRIPKEEVYKRTGIQVMPFNSLFQLFRAGQDSFIPQEVAEKILFIPD
LLAYMLTERMVCEYTIASTSQLLNPETHKFDYKLLEAVGVSPTLMCPVVMPGTLIGRLSESIARKTGIGEIPVIAVAGHD
TASAVAAVPASSPNFAYLSSGTWSLMGIEVEKPIINEVSFKNNFTNEGGIEGTTRFLKNITGMWILERCREQWKRSGLDY
SYDDMVRMAELSEFTSLINPDDPRFANPESMLREITAYCEETGQAVPASDADYVHCIFYSLANRYKEVLEILKSMSPHPI
ERLHVIGGGSRNDLLNQLTANAIGIPVLAGPSEATAIGNCLIQAKSAGLLTDCWEMRRLIATAFPPKEFYPER

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=475, Percent_Identity=41.0526315789474, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1789168, Length=491, Percent_Identity=25.8655804480652, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 52979; Mature: 52979

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYNFLAFDIGATSGRAVLGTLKDAKFEMKEIHRFPNPMVELHGRFYWDIYHLYTSLIE
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHH
SLTICARQRIRLHSIGIDTWGVDFGYVALDGSLLGLPRAYRDPYTDGAPEDFFKRIPKEE
HHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHCCHHH
VYKRTGIQVMPFNSLFQLFRAGQDSFIPQEVAEKILFIPDLLAYMLTERMVCEYTIASTS
HHHHCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLNPETHKFDYKLLEAVGVSPTLMCPVVMPGTLIGRLSESIARKTGIGEIPVIAVAGHD
HHCCCCCHHHHHHHHHHHCCCCCEECHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
TASAVAAVPASSPNFAYLSSGTWSLMGIEVEKPIINEVSFKNNFTNEGGIEGTTRFLKNI
HHHHHEECCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
TGMWILERCREQWKRSGLDYSYDDMVRMAELSEFTSLINPDDPRFANPESMLREITAYCE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ETGQAVPASDADYVHCIFYSLANRYKEVLEILKSMSPHPIERLHVIGGGSRNDLLNQLTA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH
NAIGIPVLAGPSEATAIGNCLIQAKSAGLLTDCWEMRRLIATAFPPKEFYPER
HHCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCC
>Mature Secondary Structure
MKEYNFLAFDIGATSGRAVLGTLKDAKFEMKEIHRFPNPMVELHGRFYWDIYHLYTSLIE
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHH
SLTICARQRIRLHSIGIDTWGVDFGYVALDGSLLGLPRAYRDPYTDGAPEDFFKRIPKEE
HHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHCCHHH
VYKRTGIQVMPFNSLFQLFRAGQDSFIPQEVAEKILFIPDLLAYMLTERMVCEYTIASTS
HHHHCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLNPETHKFDYKLLEAVGVSPTLMCPVVMPGTLIGRLSESIARKTGIGEIPVIAVAGHD
HHCCCCCHHHHHHHHHHHCCCCCEECHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
TASAVAAVPASSPNFAYLSSGTWSLMGIEVEKPIINEVSFKNNFTNEGGIEGTTRFLKNI
HHHHHEECCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
TGMWILERCREQWKRSGLDYSYDDMVRMAELSEFTSLINPDDPRFANPESMLREITAYCE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
ETGQAVPASDADYVHCIFYSLANRYKEVLEILKSMSPHPIERLHVIGGGSRNDLLNQLTA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH
NAIGIPVLAGPSEATAIGNCLIQAKSAGLLTDCWEMRRLIATAFPPKEFYPER
HHCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]