| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is fecR [C]
Identifier: 150007945
GI number: 150007945
Start: 1515520
End: 1516371
Strand: Direct
Name: fecR [C]
Synonym: BDI_1306
Alternate gene names: 150007945
Gene position: 1515520-1516371 (Clockwise)
Preceding gene: 150007944
Following gene: 150007946
Centisome position: 31.5
GC content: 44.84
Gene sequence:
>852_bases ATGAATCAAATAGAAAAAAATAAATTGAAGACAGACCAAGCATGGGAACAATTATACACTCGCTTGGAGCAAGACGGGCT GCTGGATAAGCCAATTTCCGGTACACAAATCCCATACCGGATCGGACTTATGAAATGGGCCGCCGCTATCGTTATACTCT GTGTATCGGTAGCTACGGCTATTTTCCTTGGACAAGAACGGACACCGGAAACCACTCTGCTCACCCTGCATAATAACGAG GCTTCCACCACCTTGGTCACGACTTTGGAAGACGGGTCTATCGTTTATCTGGCCGATAACAGTCAGTTAAGCTATCCGGA ACATTTCCAAAGAGAAAAAAGAGAGGTGTCTCTACTAGGAAACGCCCTTTTTGATGTAAGCGGGAATAAGGAACGTCCTT TCCTAATCGAGACAGAGCAGGCCCGGATCGAGGTATTGGGAACCTCATTCAATATCAAAAGCTCGGATAAAAGCGCCTTT GAATTGGCCGTTCGCCGGGGATTAGTGAAAGTGACACTCAAGAAGAACGGAGAACAAACGCTGGTAAAGGCCGGTCAAAC CGTATCCTTATTCTCCAACCGTTTACAAGTAGCTCCGACTCAAGATAACGAACAATTTTCCGATTACACCCGCCGTATCC AGTTTAAGGATGAGCGCTTAGGAGATATCTTGCATGTAATTAATCTAGAGTATCCGATGATGCCATTGAAGACAACGGCT GATTTAGAGAATAGACGGCTGACCGTTAGTTTCTATAATAACTCACCCGCAACGATGGCTGAACTGATCTGCGCGGCGTT AAAACTAAAATGTACGCAACAAAATAATATATGGATGATTTCCGAACCTTGA
Upstream 100 bases:
>100_bases TAGCCTCCAGCCTCTCATTGTCCATAAAGACAGTAGAAGCGGAAATGACCAAGGCACTACAAACACTAAGAAAAGAAATC GAGAATTATACCTAACAGTT
Downstream 100 bases:
>100_bases GACAGCTGATCGTAGGATGGTTGCTGTTACTCGTAGCTCTCATCCCTATGAATGCCCAGAATGGTAACGTACTGGGACAG GTCATACGATTGCCTAAATC
Product: anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNQIEKNKLKTDQAWEQLYTRLEQDGLLDKPISGTQIPYRIGLMKWAAAIVILCVSVATAIFLGQERTPETTLLTLHNNE ASTTLVTTLEDGSIVYLADNSQLSYPEHFQREKREVSLLGNALFDVSGNKERPFLIETEQARIEVLGTSFNIKSSDKSAF ELAVRRGLVKVTLKKNGEQTLVKAGQTVSLFSNRLQVAPTQDNEQFSDYTRRIQFKDERLGDILHVINLEYPMMPLKTTA DLENRRLTVSFYNNSPATMAELICAALKLKCTQQNNIWMISEP
Sequences:
>Translated_283_residues MNQIEKNKLKTDQAWEQLYTRLEQDGLLDKPISGTQIPYRIGLMKWAAAIVILCVSVATAIFLGQERTPETTLLTLHNNE ASTTLVTTLEDGSIVYLADNSQLSYPEHFQREKREVSLLGNALFDVSGNKERPFLIETEQARIEVLGTSFNIKSSDKSAF ELAVRRGLVKVTLKKNGEQTLVKAGQTVSLFSNRLQVAPTQDNEQFSDYTRRIQFKDERLGDILHVINLEYPMMPLKTTA DLENRRLTVSFYNNSPATMAELICAALKLKCTQQNNIWMISEP >Mature_283_residues MNQIEKNKLKTDQAWEQLYTRLEQDGLLDKPISGTQIPYRIGLMKWAAAIVILCVSVATAIFLGQERTPETTLLTLHNNE ASTTLVTTLEDGSIVYLADNSQLSYPEHFQREKREVSLLGNALFDVSGNKERPFLIETEQARIEVLGTSFNIKSSDKSAF ELAVRRGLVKVTLKKNGEQTLVKAGQTVSLFSNRLQVAPTQDNEQFSDYTRRIQFKDERLGDILHVINLEYPMMPLKTTA DLENRRLTVSFYNNSPATMAELICAALKLKCTQQNNIWMISEP
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32031; Mature: 32031
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIEKNKLKTDQAWEQLYTRLEQDGLLDKPISGTQIPYRIGLMKWAAAIVILCVSVATA CCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IFLGQERTPETTLLTLHNNEASTTLVTTLEDGSIVYLADNSQLSYPEHFQREKREVSLLG HHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHH NALFDVSGNKERPFLIETEQARIEVLGTSFNIKSSDKSAFELAVRRGLVKVTLKKNGEQT HEEEECCCCCCCCEEEECCCCEEEEEECEEECCCCCHHHHHHHHHCCEEEEEEECCCCCH LVKAGQTVSLFSNRLQVAPTQDNEQFSDYTRRIQFKDERLGDILHVINLEYPMMPLKTTA HHHCCCEEEHHHCCEEEEECCCCHHHHHHHHHEEECHHHHHHHHHHHCCCCCCCCCCCCC DLENRRLTVSFYNNSPATMAELICAALKLKCTQQNNIWMISEP CCCCCEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEEECC >Mature Secondary Structure MNQIEKNKLKTDQAWEQLYTRLEQDGLLDKPISGTQIPYRIGLMKWAAAIVILCVSVATA CCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IFLGQERTPETTLLTLHNNEASTTLVTTLEDGSIVYLADNSQLSYPEHFQREKREVSLLG HHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHH NALFDVSGNKERPFLIETEQARIEVLGTSFNIKSSDKSAFELAVRRGLVKVTLKKNGEQT HEEEECCCCCCCCEEEECCCCEEEEEECEEECCCCCHHHHHHHHHCCEEEEEEECCCCCH LVKAGQTVSLFSNRLQVAPTQDNEQFSDYTRRIQFKDERLGDILHVINLEYPMMPLKTTA HHHCCCEEEHHHCCEEEEECCCCHHHHHHHHHEEECHHHHHHHHHHHCCCCCCCCCCCCC DLENRRLTVSFYNNSPATMAELICAALKLKCTQQNNIWMISEP CCCCCEEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA