| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is upp [H]
Identifier: 150007793
GI number: 150007793
Start: 1330475
End: 1331128
Strand: Direct
Name: upp [H]
Synonym: BDI_1151
Alternate gene names: 150007793
Gene position: 1330475-1331128 (Clockwise)
Preceding gene: 150007792
Following gene: 150007804
Centisome position: 27.65
GC content: 45.72
Gene sequence:
>654_bases ATGAGAATCGTTAATCTTGGAGACACCAATTCCATATTAAACAAGTTCGTAGCCGAACTTAGAGATGTAGATATACAAAA AGACAGCCTTCGCTTCCGTCGCAATGTCGAGCGTATCGGAGAAATCATGGCTTACGAGATCAGTAAGGAATTTCATTACA GTACGAAAGACATCCAGTCCCCGCTAGGTATAGCCCCGATGAATACGCCGGACGATCAAATCGTGATTAGTACGATCTTG CGTGCCGGGCTTCCATTCCACCAAGGTTTCCTTCGGTATCTGGATAATGCGGAGAACGCTTTCGTATCCGCTTACCGCAA ATATAAAGACCGTTTGAATTTTGATATTCATATCGAATATATCGCCTCTCCTCGCTTAACAGGTAAAACCTTGATCATAT CCGACCCGATGTTGGCCACCGGAAGTTCTATGGAATTGGCGTATGAGGCCCTGTTGACCAAAGGAGTACCCGGCCATGTA CACGTAGCCTCCATCATCTCAAGCAAACAAGCCTTGGAATACTTGCAGAAGAAAATGCCGGATGACAAGACTACAATCTG GATCGCCGCATTAGATAATGACCTCGACGATCATTCTTATATCGTTCCCGGATTAGGCGATGCAGGAGATTTAGCGTTCG GCGAGAAGGAATAG
Upstream 100 bases:
>100_bases CATAAGTATGAAATCTTTCATTTATAAGTATGAATGAAAAATTTCATACTTATGATTTTTAGTGTCCGGAAATGATTACT TTTGGGCTCAAAAAAGACTC
Downstream 100 bases:
>100_bases GGATGTGTAAACCAAAACGTACTGCCTTTGCCCAACTCGGAATTTACACCGATCCGACCACCTAGTCTATTTACGATGGT CTCGCAAATAGATAGCCCCA
Product: uracil phosphoribosyltransferase
Products: NA
Alternate protein names: UMP pyrophosphorylase; UPRTase [H]
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE
Sequences:
>Translated_217_residues MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE >Mature_217_residues MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE
Specific function: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate [H]
COG id: COG0035
COG function: function code F; Uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPRTase family [H]
Homologues:
Organism=Escherichia coli, GI87082118, Length=198, Percent_Identity=30.8080808080808, Blast_Score=87, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321920, Length=140, Percent_Identity=33.5714285714286, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 2580 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 24375; Mature: 24375
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQS CEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PLGIAPMNTPDDQIVISTILRAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEY CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE IASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHVHVASIISSKQALEYLQKKMP EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE CCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQS CEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PLGIAPMNTPDDQIVISTILRAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEY CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE IASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHVHVASIISSKQALEYLQKKMP EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE CCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA