| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is pchA [H]
Identifier: 150007777
GI number: 150007777
Start: 1309884
End: 1310981
Strand: Direct
Name: pchA [H]
Synonym: BDI_1135
Alternate gene names: 150007777
Gene position: 1309884-1310981 (Clockwise)
Preceding gene: 150007776
Following gene: 150007778
Centisome position: 27.22
GC content: 49.18
Gene sequence:
>1098_bases ATGATTCCAAGAGATTCTTACGAAATAATAGACACGTTGATCAAGCAAGGCCGGAGTTTCGCTATTTGGCGTATTCCCGG TGAGGATAGGCTCCATTTCAGGATGCAAAGCGCCGGCTCTCCTTGCCTATTATACGACATAAAAGACTTAAATGAACGGA GCGGTTTTGTAATCGCTCCGTTTCAGGTGACAGCGGAACGACCTATCGTTTTAATCCAACCGGATTGCTTTGAAATCCCC TCCGAATCCGATTGGGATTTCTCTCGAGAGAAAAACGAATTCCCTTCGAATGAAATCGAAATCCCGTCCGAATCCGAGGA GAAGGAACGATACGCTTACCATTTCTCCCTGTTTACCAGCCCTTTGCTAAAAGGAAGCCAAGATAAACTAGTCCTATCCC GTAGCAAAACGATCCGGAAAGATCCCTCTTTCTCACCCGGCAAGGCATTCTTCGCCGCAGTAGAACGATATATCCGCTCC TATGTCTACCTTTGCCATACCCCGGAAACCGGAACTTGGATGGGTGGGACACCGGAAATCTTGTTATCCGGCGAGAAAGG CGACTGGCAAACGGTAGCTTTGGCCGGAACCCAATCCTTACGAGACGGGAAATTACCGAAAAGCTGGGACCATAAGAATT GGAGAGAACAGCAATTAGTCGCCTCCTATATACGCCGCCAGCTGTCCACCTTGGGTATTACTCCCGAGGAGAAGGGGCCT TATTCAGCCCGGGCCGGAGAGGTTTCCCATTTGAAAAGCGATTTCTTCTTCTCCTTGCCGAATCCCGAGAAGCTGGGTGA TGTCCTTCAACTATTACACCCTACTCCAGCCGTTTGCGGTCTTCCCAAGGAGGAGGCTTATCATTTCATCATCGAGAATG AGGGGTACGATCGTAGCTATTACTCCGGTTTCATCGGTTGGCTGGATCCCAAAGGCAAAACAGATCTGTACGTAAACCTC CGTTGCATGAATATCCTCCCCCAAACCTTTACGCTGTATGCCGGAGGCGGTCTGTTGGCGGCCTCGCAGCTAGAGGATGA GTGGCAGGAGACAGAGGATAAATTAGATACGATGCGGAGAATAGTGGGTAATTTATAA
Upstream 100 bases:
>100_bases ACAAAGGCCGTTCATCCCATGTGTGGAACGTAGACATATTCACCTCTACCGACAAACTGGTTTCCTCGGTACGGGTAATC AATAGCATACTAAAGAAGAA
Downstream 100 bases:
>100_bases TTTTATATCATATAATGTATAGCGATAAAAAGAACATCCTTCAATTGGTAGCCTTGCTGATAGAGCACGGCGTAAGTAAT ATCGTGCTATGTCCGGGGAG
Product: isochorismate synthase
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MIPRDSYEIIDTLIKQGRSFAIWRIPGEDRLHFRMQSAGSPCLLYDIKDLNERSGFVIAPFQVTAERPIVLIQPDCFEIP SESDWDFSREKNEFPSNEIEIPSESEEKERYAYHFSLFTSPLLKGSQDKLVLSRSKTIRKDPSFSPGKAFFAAVERYIRS YVYLCHTPETGTWMGGTPEILLSGEKGDWQTVALAGTQSLRDGKLPKSWDHKNWREQQLVASYIRRQLSTLGITPEEKGP YSARAGEVSHLKSDFFFSLPNPEKLGDVLQLLHPTPAVCGLPKEEAYHFIIENEGYDRSYYSGFIGWLDPKGKTDLYVNL RCMNILPQTFTLYAGGGLLAASQLEDEWQETEDKLDTMRRIVGNL
Sequences:
>Translated_365_residues MIPRDSYEIIDTLIKQGRSFAIWRIPGEDRLHFRMQSAGSPCLLYDIKDLNERSGFVIAPFQVTAERPIVLIQPDCFEIP SESDWDFSREKNEFPSNEIEIPSESEEKERYAYHFSLFTSPLLKGSQDKLVLSRSKTIRKDPSFSPGKAFFAAVERYIRS YVYLCHTPETGTWMGGTPEILLSGEKGDWQTVALAGTQSLRDGKLPKSWDHKNWREQQLVASYIRRQLSTLGITPEEKGP YSARAGEVSHLKSDFFFSLPNPEKLGDVLQLLHPTPAVCGLPKEEAYHFIIENEGYDRSYYSGFIGWLDPKGKTDLYVNL RCMNILPQTFTLYAGGGLLAASQLEDEWQETEDKLDTMRRIVGNL >Mature_365_residues MIPRDSYEIIDTLIKQGRSFAIWRIPGEDRLHFRMQSAGSPCLLYDIKDLNERSGFVIAPFQVTAERPIVLIQPDCFEIP SESDWDFSREKNEFPSNEIEIPSESEEKERYAYHFSLFTSPLLKGSQDKLVLSRSKTIRKDPSFSPGKAFFAAVERYIRS YVYLCHTPETGTWMGGTPEILLSGEKGDWQTVALAGTQSLRDGKLPKSWDHKNWREQQLVASYIRRQLSTLGITPEEKGP YSARAGEVSHLKSDFFFSLPNPEKLGDVLQLLHPTPAVCGLPKEEAYHFIIENEGYDRSYYSGFIGWLDPKGKTDLYVNL RCMNILPQTFTLYAGGGLLAASQLEDEWQETEDKLDTMRRIVGNL
Specific function: Involved in the conversion of chorismate to salicylate (Probable) [H]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=313, Percent_Identity=28.1150159744409, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87082077, Length=265, Percent_Identity=29.811320754717, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788114, Length=209, Percent_Identity=27.7511961722488, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 41668; Mature: 41668
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRDSYEIIDTLIKQGRSFAIWRIPGEDRLHFRMQSAGSPCLLYDIKDLNERSGFVIAP CCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEE FQVTAERPIVLIQPDCFEIPSESDWDFSREKNEFPSNEIEIPSESEEKERYAYHFSLFTS EEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHEEHHHHHHH PLLKGSQDKLVLSRSKTIRKDPSFSPGKAFFAAVERYIRSYVYLCHTPETGTWMGGTPEI HHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCE LLSGEKGDWQTVALAGTQSLRDGKLPKSWDHKNWREQQLVASYIRRQLSTLGITPEEKGP EEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC YSARAGEVSHLKSDFFFSLPNPEKLGDVLQLLHPTPAVCGLPKEEAYHFIIENEGYDRSY CCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHCCCCHHHCEEEEEECCCCCCHH YSGFIGWLDPKGKTDLYVNLRCMNILPQTFTLYAGGGLLAASQLEDEWQETEDKLDTMRR HCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH IVGNL HHCCC >Mature Secondary Structure MIPRDSYEIIDTLIKQGRSFAIWRIPGEDRLHFRMQSAGSPCLLYDIKDLNERSGFVIAP CCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEE FQVTAERPIVLIQPDCFEIPSESDWDFSREKNEFPSNEIEIPSESEEKERYAYHFSLFTS EEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHEEHHHHHHH PLLKGSQDKLVLSRSKTIRKDPSFSPGKAFFAAVERYIRSYVYLCHTPETGTWMGGTPEI HHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCE LLSGEKGDWQTVALAGTQSLRDGKLPKSWDHKNWREQQLVASYIRRQLSTLGITPEEKGP EEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC YSARAGEVSHLKSDFFFSLPNPEKLGDVLQLLHPTPAVCGLPKEEAYHFIIENEGYDRSY CCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHCCCCHHHCEEEEEECCCCCCHH YSGFIGWLDPKGKTDLYVNLRCMNILPQTFTLYAGGGLLAASQLEDEWQETEDKLDTMRR HCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH IVGNL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7500944; 10984043 [H]