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The map label for this gene is yidA [C]

Identifier: 150007776

GI number: 150007776

Start: 1308655

End: 1309887

Strand: Direct

Name: yidA [C]

Synonym: BDI_1134

Alternate gene names: 150007776

Gene position: 1308655-1309887 (Clockwise)

Preceding gene: 150007775

Following gene: 150007777

Centisome position: 27.2

GC content: 50.45

Gene sequence:

>1233_bases
ATGAAGTACAAATTATTAGTCTTAGACGTAGATGGGACGTTGCTTAACGACAAGAAAGAGATAACTCCCCGGACCCATGC
CGCCCTGTTAAAGGCTCAGCAGATGGGAGTTCATGTTGTATTGGCATCCGGCCGACCCACCAACGGGGTTCAACCCTTGG
CGGAGGCCCTTGAATTGAATCATTACGGTGGTTTCATATTATCTTATAACGGAGGTCAGATCATCAATGCCCAGACCGGA
GAATTGATGTTCGAGAAACGAATCGATCCGGCCATGATTCCTTATTTGAACCGGAAGGCGAAGGAAAACGGTTTTGCTAT
CTTCACGTATCACAAGGACTATATCCTGACCGATAGCCCGGAAAACAAGCATGTCCAAGAGGAGGCCGAACTCAATAAGA
TGCGCATCATCGGTGTGGAGAATTTCCCGGAAGCGGTGGATTTCGCACCCTGTAAGTGTATTCTTACCAGCGATGACGAG
AACAATCTAGTGGGTCTCGAAAATCATTGGAAGAAACGTCTGGACGGGGTATTGGAAGCTTTCCGCTCCGAGGACTATTT
CTTGGAGGTAGCTCCTCATTTCATCAATAAGGGAAATACGTTGGCGGTATTGATGGAGATGCTGAATATCACGACCGAAG
AGGTTGTCGCTATTGGTGATGGCGTAGCCGACGTATCCATGCTTCAATTAGCCGGTACCGGCGTGGCGATGGGTAACGCA
CGCGACTCCGTAAAGGCTTGCGCCGATTTCACGACCTTATCTAATAATATGGATGGTGTGGCGGTAGCGATCGAGAAAGC
GATCCTTGCCACGATCAAACCCACGGAGGTTCCGTTAGATCAACTAAACGCACGGGCCAAACATGCCTTAATGGGTAATC
TAGGCATTCAATATACCTATGCGTCGGAGGATCGTGTGGAAGCGACCATGCCTGTAGACGAACGGACCCGCCAGCCTTTC
GGTATCTTGCACGGAGGCGCTACGCTGGCTTTGGCGGAGACCGTGGCCGGACTAGGTTCCATGATTCTGGCGAAACCGGA
CGAGATGGTAGTCGGCATGCAAGTTAGCGGCAGCCATATGTCGTCCGCCCACGAGGGAGACACGGTACGTGCCGTCGGGA
CGATTATCCACAAAGGCCGTTCATCCCATGTGTGGAACGTAGACATATTCACCTCTACCGACAAACTGGTTTCCTCGGTA
CGGGTAATCAATAGCATACTAAAGAAGAAATGA

Upstream 100 bases:

>100_bases
TGAGCTTGCGCCGATATACGTAAATTCCTTTCATAGAAATGTCTTCTAACTATCAACTATTTTATGTACATTTGTATTCT
AAACCATAAAATAAGACGCC

Downstream 100 bases:

>100_bases
TTCCAAGAGATTCTTACGAAATAATAGACACGTTGATCAAGCAAGGCCGGAGTTTCGCTATTTGGCGTATTCCCGGTGAG
GATAGGCTCCATTTCAGGAT

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKYKLLVLDVDGTLLNDKKEITPRTHAALLKAQQMGVHVVLASGRPTNGVQPLAEALELNHYGGFILSYNGGQIINAQTG
ELMFEKRIDPAMIPYLNRKAKENGFAIFTYHKDYILTDSPENKHVQEEAELNKMRIIGVENFPEAVDFAPCKCILTSDDE
NNLVGLENHWKKRLDGVLEAFRSEDYFLEVAPHFINKGNTLAVLMEMLNITTEEVVAIGDGVADVSMLQLAGTGVAMGNA
RDSVKACADFTTLSNNMDGVAVAIEKAILATIKPTEVPLDQLNARAKHALMGNLGIQYTYASEDRVEATMPVDERTRQPF
GILHGGATLALAETVAGLGSMILAKPDEMVVGMQVSGSHMSSAHEGDTVRAVGTIIHKGRSSHVWNVDIFTSTDKLVSSV
RVINSILKKK

Sequences:

>Translated_410_residues
MKYKLLVLDVDGTLLNDKKEITPRTHAALLKAQQMGVHVVLASGRPTNGVQPLAEALELNHYGGFILSYNGGQIINAQTG
ELMFEKRIDPAMIPYLNRKAKENGFAIFTYHKDYILTDSPENKHVQEEAELNKMRIIGVENFPEAVDFAPCKCILTSDDE
NNLVGLENHWKKRLDGVLEAFRSEDYFLEVAPHFINKGNTLAVLMEMLNITTEEVVAIGDGVADVSMLQLAGTGVAMGNA
RDSVKACADFTTLSNNMDGVAVAIEKAILATIKPTEVPLDQLNARAKHALMGNLGIQYTYASEDRVEATMPVDERTRQPF
GILHGGATLALAETVAGLGSMILAKPDEMVVGMQVSGSHMSSAHEGDTVRAVGTIIHKGRSSHVWNVDIFTSTDKLVSSV
RVINSILKKK
>Mature_410_residues
MKYKLLVLDVDGTLLNDKKEITPRTHAALLKAQQMGVHVVLASGRPTNGVQPLAEALELNHYGGFILSYNGGQIINAQTG
ELMFEKRIDPAMIPYLNRKAKENGFAIFTYHKDYILTDSPENKHVQEEAELNKMRIIGVENFPEAVDFAPCKCILTSDDE
NNLVGLENHWKKRLDGVLEAFRSEDYFLEVAPHFINKGNTLAVLMEMLNITTEEVVAIGDGVADVSMLQLAGTGVAMGNA
RDSVKACADFTTLSNNMDGVAVAIEKAILATIKPTEVPLDQLNARAKHALMGNLGIQYTYASEDRVEATMPVDERTRQPF
GILHGGATLALAETVAGLGSMILAKPDEMVVGMQVSGSHMSSAHEGDTVRAVGTIIHKGRSSHVWNVDIFTSTDKLVSSV
RVINSILKKK

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=31.8681318681319, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787976, Length=136, Percent_Identity=38.2352941176471, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786813, Length=136, Percent_Identity=36.7647058823529, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786982, Length=275, Percent_Identity=28.3636363636364, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI48994981, Length=249, Percent_Identity=26.1044176706827, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787043, Length=286, Percent_Identity=27.972027972028, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081790, Length=295, Percent_Identity=26.7796610169492, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081741, Length=244, Percent_Identity=24.5901639344262, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 44712; Mature: 44712

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLLVLDVDGTLLNDKKEITPRTHAALLKAQQMGVHVVLASGRPTNGVQPLAEALELN
CCEEEEEEECCCCEECCCHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCC
HYGGFILSYNGGQIINAQTGELMFEKRIDPAMIPYLNRKAKENGFAIFTYHKDYILTDSP
CCCCEEEEECCCEEEECCCCCCCEECCCCCHHCCHHCCCCCCCCEEEEEEECCEEEECCC
ENKHVQEEAELNKMRIIGVENFPEAVDFAPCKCILTSDDENNLVGLENHWKKRLDGVLEA
CCCCCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHH
FRSEDYFLEVAPHFINKGNTLAVLMEMLNITTEEVVAIGDGVADVSMLQLAGTGVAMGNA
HCCCCEEEEECHHHHCCCCHHHHHHHHHCCCHHHHEEECCCCHHHHHHHCCCCCEEECCC
RDSVKACADFTTLSNNMDGVAVAIEKAILATIKPTEVPLDQLNARAKHALMGNLGIQYTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE
ASEDRVEATMPVDERTRQPFGILHGGATLALAETVAGLGSMILAKPDEMVVGMQVSGSHM
CCCCCEEEECCCHHHCCCCCEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCC
SSAHEGDTVRAVGTIIHKGRSSHVWNVDIFTSTDKLVSSVRVINSILKKK
CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYKLLVLDVDGTLLNDKKEITPRTHAALLKAQQMGVHVVLASGRPTNGVQPLAEALELN
CCEEEEEEECCCCEECCCHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCC
HYGGFILSYNGGQIINAQTGELMFEKRIDPAMIPYLNRKAKENGFAIFTYHKDYILTDSP
CCCCEEEEECCCEEEECCCCCCCEECCCCCHHCCHHCCCCCCCCEEEEEEECCEEEECCC
ENKHVQEEAELNKMRIIGVENFPEAVDFAPCKCILTSDDENNLVGLENHWKKRLDGVLEA
CCCCCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHH
FRSEDYFLEVAPHFINKGNTLAVLMEMLNITTEEVVAIGDGVADVSMLQLAGTGVAMGNA
HCCCCEEEEECHHHHCCCCHHHHHHHHHCCCHHHHEEECCCCHHHHHHHCCCCCEEECCC
RDSVKACADFTTLSNNMDGVAVAIEKAILATIKPTEVPLDQLNARAKHALMGNLGIQYTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE
ASEDRVEATMPVDERTRQPFGILHGGATLALAETVAGLGSMILAKPDEMVVGMQVSGSHM
CCCCCEEEECCCHHHCCCCCEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCC
SSAHEGDTVRAVGTIIHKGRSSHVWNVDIFTSTDKLVSSVRVINSILKKK
CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA