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The map label for this gene is yfbG [C]

Identifier: 150007695

GI number: 150007695

Start: 1215925

End: 1216857

Strand: Direct

Name: yfbG [C]

Synonym: BDI_1050

Alternate gene names: 150007695

Gene position: 1215925-1216857 (Clockwise)

Preceding gene: 150007694

Following gene: 150007696

Centisome position: 25.27

GC content: 43.73

Gene sequence:

>933_bases
ATGAAGCAAATACTTATCACCGGGGGCGCCGGCTTTATCGGTTCTCATTTATGTGCCCGTCTTTTAGAAGAAGGAAATGA
AGTAATTTGTCTGGATAACTATTTTACGGGAAGTAAGGAGAATGTGATTCCTCTGCTGAAAAATCCACATTTCGAGTTGA
TCAGGCATGATGTTTCTATACCGTTCCAAGCCGAGGTCGATGAGATTTATAATTTGGCATGTCCCGCATCTCCAGTTTAT
TATCAAATAGATCCGATACAGACGATCAAGACATCCGTGTTAGGAGCGGTCAATATGTTAGGTCTGGCAAAACGGGTGAA
CGCTAAGATATTACAAGCATCTACCAGTGAGGTGTATGGAGATCCCATGATACACCCGCAGCCGGAAAGCTATTGGGGAA
ATGTCAACCCGATAGGGCCTCGCTCTTGTTATGACGAGGGCAAGCGTTGCGCCGAGACCTTATTTATGGATTACCATCGC
CAAAACAAGGTTCGCATTAAAATCATCCGCATCTTTAATACGTATGGGCCTAATATGAGTACGAACGATGGCCGTGTCGT
CTCTAATTTCATTATACAGGCATTACAAAATAAGGACATTACGATTTATGGGGATGGAAACCAAACTCGTAGTTTCCAAT
ATGTAGACGATTTGATCGAGGGGATGATTCGCATGATGAATACCTCGGATGATTTTACCGGCCCGGTAAATATCGGAAAT
CAGGGAGAGTTCTCGATGAACGAGTTGGCCAAGATCGTGATCCGTTTGACAAACTCCTCCTCTAAGATCGTATACCGCCC
GTTGCCGGGAGACGATCCCAAGCAACGTAAGCCCGATATTACGTTGGCCAAAGAGAAATTAGATGGGTGGGAACCTACGG
TTTGTTTGGAGGAAGGATTAAAGAAAACAATATTATACTTTAAATCTCTCTAA

Upstream 100 bases:

>100_bases
TATCTGGACTTGATCTATCCTAAGATTCCTTATCTGGATATAGATTATTTACGTCCGGATCCACCTTATAGGGTGAAATT
CACGAAATAAATTTAATATA

Downstream 100 bases:

>100_bases
TAAATTTCTAATTTGGCCTAAGAGTATTCTAACTAAATATTCATAAGCGATAAAAGAGTGACTTCTACCTTTGCGTAAAA
TTTAACGCAAATGGACAGAC

Product: putative NAD dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKQILITGGAGFIGSHLCARLLEEGNEVICLDNYFTGSKENVIPLLKNPHFELIRHDVSIPFQAEVDEIYNLACPASPVY
YQIDPIQTIKTSVLGAVNMLGLAKRVNAKILQASTSEVYGDPMIHPQPESYWGNVNPIGPRSCYDEGKRCAETLFMDYHR
QNKVRIKIIRIFNTYGPNMSTNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVDDLIEGMIRMMNTSDDFTGPVNIGN
QGEFSMNELAKIVIRLTNSSSKIVYRPLPGDDPKQRKPDITLAKEKLDGWEPTVCLEEGLKKTILYFKSL

Sequences:

>Translated_310_residues
MKQILITGGAGFIGSHLCARLLEEGNEVICLDNYFTGSKENVIPLLKNPHFELIRHDVSIPFQAEVDEIYNLACPASPVY
YQIDPIQTIKTSVLGAVNMLGLAKRVNAKILQASTSEVYGDPMIHPQPESYWGNVNPIGPRSCYDEGKRCAETLFMDYHR
QNKVRIKIIRIFNTYGPNMSTNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVDDLIEGMIRMMNTSDDFTGPVNIGN
QGEFSMNELAKIVIRLTNSSSKIVYRPLPGDDPKQRKPDITLAKEKLDGWEPTVCLEEGLKKTILYFKSL
>Mature_310_residues
MKQILITGGAGFIGSHLCARLLEEGNEVICLDNYFTGSKENVIPLLKNPHFELIRHDVSIPFQAEVDEIYNLACPASPVY
YQIDPIQTIKTSVLGAVNMLGLAKRVNAKILQASTSEVYGDPMIHPQPESYWGNVNPIGPRSCYDEGKRCAETLFMDYHR
QNKVRIKIIRIFNTYGPNMSTNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVDDLIEGMIRMMNTSDDFTGPVNIGN
QGEFSMNELAKIVIRLTNSSSKIVYRPLPGDDPKQRKPDITLAKEKLDGWEPTVCLEEGLKKTILYFKSL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=57.0032573289902, Blast_Score=368, Evalue=1e-102,
Organism=Homo sapiens, GI7657641, Length=327, Percent_Identity=29.6636085626911, Blast_Score=109, Evalue=3e-24,
Organism=Escherichia coli, GI1788589, Length=346, Percent_Identity=26.878612716763, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI48994969, Length=341, Percent_Identity=26.099706744868, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786974, Length=332, Percent_Identity=27.4096385542169, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788353, Length=344, Percent_Identity=24.1279069767442, Blast_Score=78, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17539532, Length=309, Percent_Identity=58.5760517799353, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI115532424, Length=324, Percent_Identity=26.2345679012346, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17568069, Length=332, Percent_Identity=27.1084337349398, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319493, Length=256, Percent_Identity=25.390625, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21356223, Length=308, Percent_Identity=58.7662337662338, Blast_Score=382, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34873; Mature: 34873

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILITGGAGFIGSHLCARLLEEGNEVICLDNYFTGSKENVIPLLKNPHFELIRHDVSI
CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHHCCCC
PFQAEVDEIYNLACPASPVYYQIDPIQTIKTSVLGAVNMLGLAKRVNAKILQASTSEVYG
CCCCCHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCHHHCC
DPMIHPQPESYWGNVNPIGPRSCYDEGKRCAETLFMDYHRQNKVRIKIIRIFNTYGPNMS
CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
TNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVDDLIEGMIRMMNTSDDFTGPVNIGN
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QGEFSMNELAKIVIRLTNSSSKIVYRPLPGDDPKQRKPDITLAKEKLDGWEPTVCLEEGL
CCCCCHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCHHHHHHH
KKTILYFKSL
HHHHHHHHCC
>Mature Secondary Structure
MKQILITGGAGFIGSHLCARLLEEGNEVICLDNYFTGSKENVIPLLKNPHFELIRHDVSI
CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHHCCCC
PFQAEVDEIYNLACPASPVYYQIDPIQTIKTSVLGAVNMLGLAKRVNAKILQASTSEVYG
CCCCCHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCHHHCC
DPMIHPQPESYWGNVNPIGPRSCYDEGKRCAETLFMDYHRQNKVRIKIIRIFNTYGPNMS
CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
TNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVDDLIEGMIRMMNTSDDFTGPVNIGN
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QGEFSMNELAKIVIRLTNSSSKIVYRPLPGDDPKQRKPDITLAKEKLDGWEPTVCLEEGL
CCCCCHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCHHHHHHH
KKTILYFKSL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]