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The map label for this gene is hupB [C]

Identifier: 150007590

GI number: 150007590

Start: 1093936

End: 1094226

Strand: Direct

Name: hupB [C]

Synonym: BDI_0943

Alternate gene names: 150007590

Gene position: 1093936-1094226 (Clockwise)

Preceding gene: 150007589

Following gene: 150007591

Centisome position: 22.74

GC content: 46.39

Gene sequence:

>291_bases
ATGAAAAACAAGGAACTTATAACGGAATTGGCGAATCGCATGGATTGGACCTCGAAGGAGGTATCCGACATGCTTTCTGC
GCTCAGTTCCGTCGTAAGTTCGAAATTAGTGGATAACGATACGATCTATCTGCAAGGCTTCGGCCAGTTCGAGGTGAAAA
AGAAAGCGGAACGTATTTCCGTGAATCCGGCGAACGGGAAGCGATATCTGGTTCCCCCTAAATTAGTTCCCGTGTTCAAG
CCCGGAACGACCGTGAAGAATCGTTTAAAGGAATTGGGTGATCATGAATAA

Upstream 100 bases:

>100_bases
TGTATGGTAAAGTGTTGAATTGATGTAAAAACTGTCAATATATTTGTCGGTTAACGAAAAAATAACTAATATAGCAGCAC
GAACTGTTATGGAATTAGAT

Downstream 100 bases:

>100_bases
CCGGCTGAATATACAAGATTTAGCCGGTTTATTATCGGAGCGTACCGGCAAGGACAGAGGAGAGGTAGAGCGCTTCTTGA
GAGATTTTATCTCGGTGGTA

Product: putative DNA-binding protein HU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKAERISVNPANGKRYLVPPKLVPVFK
PGTTVKNRLKELGDHE

Sequences:

>Translated_96_residues
MKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKAERISVNPANGKRYLVPPKLVPVFK
PGTTVKNRLKELGDHE
>Mature_96_residues
MKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKAERISVNPANGKRYLVPPKLVPVFK
PGTTVKNRLKELGDHE

Specific function: Histone-Like DNA-Binding Protein Which Is Capable Of Wrapping DNA To Stabilize It, And Thus To Prevent Its Denaturation Under Extreme Environmental Conditions. [C]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 860 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). 2040 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10806; Mature: 10806

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKAERIS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC
VNPANGKRYLVPPKLVPVFKPGTTVKNRLKELGDHE
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKAERIS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC
VNPANGKRYLVPPKLVPVFKPGTTVKNRLKELGDHE
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA