| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007466
Identifier: 150007466
GI number: 150007466
Start: 963425
End: 965233
Strand: Reverse
Name: 150007466
Synonym: BDI_0817
Alternate gene names: NA
Gene position: 965233-963425 (Counterclockwise)
Preceding gene: 150007469
Following gene: 150007465
Centisome position: 20.06
GC content: 43.12
Gene sequence:
>1809_bases ATGAACAAGATTAGTATATACGCATTGACGTTCTTTTTAAGTTTATCGAGCGTAACCGTTTATTCCCAAAAGAATAATAA GCAAGTTATTTTTACTAACGAACAAGGGAGCGATATATTTTATCATACCATCGAACGCGGACAAACCGTATACGCCATAG CGACCATGTATGGCGTAAGCGTAGAGGATATTTATCGGTTGAATCCGGAAAGTAAAGAAGGGATCAAGGCCGGTTCTACG TTAAGAATCCCGCAGAAGGACTCCGCTATCGCACCTTCCGGCAAAGCAGATAACTATACATACCATACGATCCAGCCGAA AGAGACCTTGTACTCTTTATCCATTAAATATTCAGTGCCCGCCACGGATATTATCGCCGCCAATCCGGGTCTCTCCACAT CGACCTTTACGATTGGCAAGAATATCCGGATCCCGCCGACACGACTGGAAACCTTGCCTACTACGGAAAAAAAGACCGTA CAGAAGGAAATGGAATATACCATACAGAAAAAAGAGACCATGTACCGTATCTGCCGGAAGTTCGATATTTCCAGCGTGGA GCTTTTAAGACTCAACCCCGAGCTGAAAAACGGAGTGAAAGCGGGCATGGTTATCAAGATACCGGTAGCCAGTGAAGAAG TGATCACCCAAAACATAAGACAGCCGGAAGAGCGTGAGGTGAACGCCCTCCTCTCTACTCCTAAAGATATAAAGAAGGTG AACCGTATCCAAGTCGCCTTATTGTTGCCGTTCATGACGAACGAGACAACGCAATCATCCGCAACCTCCCGTTTCGTGGA ATATTACGAGGGATTGCTATTGGCGGTCGACAGCTTACGAAATATGGGAACCTCTATCGAGCTATCGGTATATGATACTG GAAACGGTACGAAGAAAGTCAAGGAGATATTGAAAGAAGATGCGTTATCAAACGCTAATTTGATCATTGGTGCCGTACAG AACGACCAAATCGGATTGATCGCAGATTTCGCTCAAAAGCACAATATCAAATACGTGATCCCTTTCACCTCCAAGAATGA TGATGTCTTGTCAAACGCGAATGTTTATCAAGTAAACACACCTCATTCCTATTTATACTCCAAGGCGGCACAAGCCGGAT GCGATTTATTCTCGGATTACAATATCATACTTGTCAATATAAAGGATAAAGAAGAAAAGCCGGAATTTATCAAAGCCTTC AAGACGGAGATGCAGCAACGCGATATCCCGTTCAAGGAAGTAACTTATAAAGGGGATACTTTCGCCACGGATATAGAGGC AGCCATGGTAAGGGACAAGCGGAATGTGGTATTGCCAACCTCCGCCTCCTTAGATGCGGTGAATAAGATCAAGGCACCGC TCCGTATGCTTTCCGAGTTGAAAGAGGAGGAGAAAGAGCCTTATATGGTCAACCTATTCGGTTATCCGGAATGGCAGACC TATACAAGAGAGTGTCTGGAGGACTTCTACGCATTGAACACCTATATCTATAGTAATTTCTATGCGGACAACTTATCTCC GGAAGTCCATAGCTTTTATTCCGATTATAAAAACTGGTATAGCAAGAATTTAATCAACACATTCCCGAAATATGGAATCC TAGGCTTTGACACGGGTATGTATTTCCTAGGTGCCATCAATAAATATGGCTCGAACTTCGAGAATAATCTAGACAAGATC CATTATAAGAGCATCCAGACCGGATTCGATTTCCATAGAGTGAATAATTGGGGCGGTTTTATCAATACGAACTTGTTTAT TGTACATTACAAGAATGATTATACGGTAACCCGCAGTGAGGTAAGATAA
Upstream 100 bases:
>100_bases AGTCTAAAAATTACGGTTCCAAAATTAGGGAAATAAAAGGACATACGTAGCATGATAAGCAAAATTCACTATCTTTGTCA CAAAATACTCCGAACAGCAA
Downstream 100 bases:
>100_bases TTGATATGATGACGAAAAAGATATTTGTAGCGATATTTCTGTGCATGGCAAGCTTATCGATTTGCCATGCGCAGAAAAGT ACTTTTAAGCAAGAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: LysM Domain-Containing Protein; LysM-Repeat Protein; LysM Domain-Containing Proteins; Peptidase M; LysM-Repeat Domain Protein; LysM Repeat-Containing Protein; LysM-Repeat Domain-Containing Protein; NLP/P60 Protein; LysM-Repeat-Containing Protein
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR
Sequences:
>Translated_602_residues MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR >Mature_602_residues MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR
Specific function: Unknown
COG id: COG3858
COG function: function code R; Predicted glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68645; Mature: 68645
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVS CCCEEEEHHEEHHHHHEEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCC VEDIYRLNPESKEGIKAGSTLRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVP HHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECHHHEEEEEEEEEECC ATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTVQKEMEYTIQKKETMYRICRK CCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV CCCCCEEEEEECCHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHH NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKV HHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH KEILKEDALSNANLIIGAVQNDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNT HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCEEEECC PHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAFKTEMQQRDIPFKEVTYKGDT CHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC FATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT CHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGM HHHHHHHHHHHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH YFLGAINKYGSNFENNLDKIHYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSE HHHHHHHHHCCCHHCCHHHEEHHHHHCCCCEEEECCCCCEEECCEEEEEECCCEEEECCC VR CC >Mature Secondary Structure MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVS CCCEEEEHHEEHHHHHEEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCC VEDIYRLNPESKEGIKAGSTLRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVP HHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECHHHEEEEEEEEEECC ATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTVQKEMEYTIQKKETMYRICRK CCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV CCCCCEEEEEECCHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHH NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKV HHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH KEILKEDALSNANLIIGAVQNDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNT HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCEEEECC PHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAFKTEMQQRDIPFKEVTYKGDT CHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC FATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT CHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGM HHHHHHHHHHHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH YFLGAINKYGSNFENNLDKIHYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSE HHHHHHHHHCCCHHCCHHHEEHHHHHCCCCEEEECCCCCEEECCEEEEEECCCEEEECCC VR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA