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The map label for this gene is yccM [C]

Identifier: 150007424

GI number: 150007424

Start: 906904

End: 908502

Strand: Reverse

Name: yccM [C]

Synonym: BDI_0775

Alternate gene names: 150007424

Gene position: 908502-906904 (Counterclockwise)

Preceding gene: 150007425

Following gene: 150007423

Centisome position: 18.88

GC content: 50.78

Gene sequence:

>1599_bases
ATGAAGAAGCCTAATTACTTAAAAGGATTGCGGGTCGTACTCGCGATCCTCATTTTCGTACCCATACTTTTATTCTTCGT
TGATTTCGCCGATGTATTGCCGGACAACCTGCACACGTTGTTGCATCTCCAGATCATGCCCGCTATTTTAGGGGGGATGG
CGGGGTTGGTAGTCTTCCAATTCGTATTGGCTTTATTGTTCGGCCGGATCTATTGCTCGGTTATTTGCCCGGCGGGCGTA
TTGCAAGATATTATCAACCGGGTTTTCTGTATCGGGAAGAAGAAAAAGAAAGGAGTACGCAGGTTCAGCTATCATAAGCC
CATGAATATCTTACGGTACTCAATTCTCGGGCTTACATTCGTATTGGCTGTTTTCGGGATGATCGAATTATGTACGTTGC
TAGATCCGTACAGTAACTTCGGCCGTATAGCGAACAACCTGTTCCGTCCGGTCGTCATGTGGGTCAATAACCTGCTGGCC
GACGGATTGGCACGGATGGATAACTATACGCTTTATCACGTCACGATTAGCAACGTGACGGTATTCGGCGTGATATCCGC
TTTGGTCGCGTTGCTCGTATTCATCCTCATGGTCGTATTCCGGGGAAGGTTGTTCTGCAATACGCTTTGCCCGGTAGGAA
CGCTGTTGAGCCTGATCTCCCGGTATTCGTTTTTCCGGATCTCCTTTGACAAAGAAGCTTGTACGCATTGTGGTAATTGC
GAGCATACTTGTAAGGCGGAGGCGATCGACAGCAAGAACCTCACCGTAGATACCTCCCGTTGCGTAGATTGCTTCAACTG
CGTGTCCTCGTGCGCTAAAGGAGGATTGCAATACCGTTTCAAGCCTTCCTTCAAGAAAGAAGCCGAAACAGCTCGCGCAC
AAACGGACGTGATCCAACAGGCTACCGCTCCGAACAGCCGCCGTACATTTCTCTCGGCAGGGGCTACCGTCGCGGTCTCC
CTCCCGATCGTATCCACCATTGCCCAAGGAATGGAAAAAGGGCATGGCAAAGGGCAGCACGGGCAAGGTAAGCACGGCAA
TAAATGGCCCCCTATCGTACCGCCGGGAGCGATCAGCTTAGAACGTTTCAAGGATGTATGTACCGGATGCCAGATTTGCG
TGACTCAATGCCCGAGTCATGTACTACGTCCCACGGGATTGGAGTATGGCTTTGATTATATGTTGAAACCCCGTATCGCT
TACATCGACAGTTATTGCAATTACGAATGCACGGTCTGCTCGGAGGTTTGCCCCACGCACGCTATAAAGCCGCTTACCAA
GGAAGAGAAAGCGACTACACAAGTGGGCATCGCCACCTTCTTCATCAACCGTTGTATCGTAAAGACGGAGGGGACGGATT
GCGGGGCTTGTTCGGAGCACTGCCCTACCCAAGCCGTGCATATGGTTCCTTACGAGGGCACGCTGACCATCCCGCAAGTA
AACCCCGATCTTTGCATCGGTTGTGGCGGCTGCGAATCGATCTGTCCCGTACGCCCGATGAGAGCGATCATCATCAAGGC
GAACGAGGTACACAAGTTCGTGGAGAAGCCTAAAGAGGAAGAGGTGAAAAAGGTAGAAATAGATGACTTCGGATTCTAA

Upstream 100 bases:

>100_bases
TATGGCCGCCGTAGGTCATATCGGTAAAGGCGAGGCTTTAAAGCTAGGTACGACGAATCTGGATAATGTCACGATCAAAC
GTATTAAGATATAATCGAGG

Downstream 100 bases:

>100_bases
GAGAAAAATGCTACCTTTGTCACAAATTTTTGATACATGACATTTGAATTACAGTATAACGATACGAAATCGAACGCTAG
GGCGGGCTTGATTACCACCG

Product: ferredoxin-type protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKKPNYLKGLRVVLAILIFVPILLFFVDFADVLPDNLHTLLHLQIMPAILGGMAGLVVFQFVLALLFGRIYCSVICPAGV
LQDIINRVFCIGKKKKKGVRRFSYHKPMNILRYSILGLTFVLAVFGMIELCTLLDPYSNFGRIANNLFRPVVMWVNNLLA
DGLARMDNYTLYHVTISNVTVFGVISALVALLVFILMVVFRGRLFCNTLCPVGTLLSLISRYSFFRISFDKEACTHCGNC
EHTCKAEAIDSKNLTVDTSRCVDCFNCVSSCAKGGLQYRFKPSFKKEAETARAQTDVIQQATAPNSRRTFLSAGATVAVS
LPIVSTIAQGMEKGHGKGQHGQGKHGNKWPPIVPPGAISLERFKDVCTGCQICVTQCPSHVLRPTGLEYGFDYMLKPRIA
YIDSYCNYECTVCSEVCPTHAIKPLTKEEKATTQVGIATFFINRCIVKTEGTDCGACSEHCPTQAVHMVPYEGTLTIPQV
NPDLCIGCGGCESICPVRPMRAIIIKANEVHKFVEKPKEEEVKKVEIDDFGF

Sequences:

>Translated_532_residues
MKKPNYLKGLRVVLAILIFVPILLFFVDFADVLPDNLHTLLHLQIMPAILGGMAGLVVFQFVLALLFGRIYCSVICPAGV
LQDIINRVFCIGKKKKKGVRRFSYHKPMNILRYSILGLTFVLAVFGMIELCTLLDPYSNFGRIANNLFRPVVMWVNNLLA
DGLARMDNYTLYHVTISNVTVFGVISALVALLVFILMVVFRGRLFCNTLCPVGTLLSLISRYSFFRISFDKEACTHCGNC
EHTCKAEAIDSKNLTVDTSRCVDCFNCVSSCAKGGLQYRFKPSFKKEAETARAQTDVIQQATAPNSRRTFLSAGATVAVS
LPIVSTIAQGMEKGHGKGQHGQGKHGNKWPPIVPPGAISLERFKDVCTGCQICVTQCPSHVLRPTGLEYGFDYMLKPRIA
YIDSYCNYECTVCSEVCPTHAIKPLTKEEKATTQVGIATFFINRCIVKTEGTDCGACSEHCPTQAVHMVPYEGTLTIPQV
NPDLCIGCGGCESICPVRPMRAIIIKANEVHKFVEKPKEEEVKKVEIDDFGF
>Mature_532_residues
MKKPNYLKGLRVVLAILIFVPILLFFVDFADVLPDNLHTLLHLQIMPAILGGMAGLVVFQFVLALLFGRIYCSVICPAGV
LQDIINRVFCIGKKKKKGVRRFSYHKPMNILRYSILGLTFVLAVFGMIELCTLLDPYSNFGRIANNLFRPVVMWVNNLLA
DGLARMDNYTLYHVTISNVTVFGVISALVALLVFILMVVFRGRLFCNTLCPVGTLLSLISRYSFFRISFDKEACTHCGNC
EHTCKAEAIDSKNLTVDTSRCVDCFNCVSSCAKGGLQYRFKPSFKKEAETARAQTDVIQQATAPNSRRTFLSAGATVAVS
LPIVSTIAQGMEKGHGKGQHGQGKHGNKWPPIVPPGAISLERFKDVCTGCQICVTQCPSHVLRPTGLEYGFDYMLKPRIA
YIDSYCNYECTVCSEVCPTHAIKPLTKEEKATTQVGIATFFINRCIVKTEGTDCGACSEHCPTQAVHMVPYEGTLTIPQV
NPDLCIGCGGCESICPVRPMRAIIIKANEVHKFVEKPKEEEVKKVEIDDFGF

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=261, Percent_Identity=26.8199233716475, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788536, Length=157, Percent_Identity=25.4777070063694, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1788533, Length=206, Percent_Identity=27.1844660194175, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58846; Mature: 58846

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPNYLKGLRVVLAILIFVPILLFFVDFADVLPDNLHTLLHLQIMPAILGGMAGLVVFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLALLFGRIYCSVICPAGVLQDIINRVFCIGKKKKKGVRRFSYHKPMNILRYSILGLTF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLAVFGMIELCTLLDPYSNFGRIANNLFRPVVMWVNNLLADGLARMDNYTLYHVTISNVT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHH
VFGVISALVALLVFILMVVFRGRLFCNTLCPVGTLLSLISRYSFFRISFDKEACTHCGNC
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCEEEEEECHHHHHCCCCC
EHTCKAEAIDSKNLTVDTSRCVDCFNCVSSCAKGGLQYRFKPSFKKEAETARAQTDVIQQ
CCCCHHHCCCCCCCEECHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH
ATAPNSRRTFLSAGATVAVSLPIVSTIAQGMEKGHGKGQHGQGKHGNKWPPIVPPGAISL
HCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ERFKDVCTGCQICVTQCPSHVLRPTGLEYGFDYMLKPRIAYIDSYCNYECTVCSEVCPTH
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCHHHHHHHHCCCCEEEHHHHCCHH
AIKPLTKEEKATTQVGIATFFINRCIVKTEGTDCGACSEHCPTQAVHMVPYEGTLTIPQV
HCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCCCCEEEECCCCEEECCCC
NPDLCIGCGGCESICPVRPMRAIIIKANEVHKFVEKPKEEEVKKVEIDDFGF
CCCEEEECCCCCCCCCCCCCHHEEEEHHHHHHHHHCCCHHHHHEECCCCCCC
>Mature Secondary Structure
MKKPNYLKGLRVVLAILIFVPILLFFVDFADVLPDNLHTLLHLQIMPAILGGMAGLVVFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLALLFGRIYCSVICPAGVLQDIINRVFCIGKKKKKGVRRFSYHKPMNILRYSILGLTF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLAVFGMIELCTLLDPYSNFGRIANNLFRPVVMWVNNLLADGLARMDNYTLYHVTISNVT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHH
VFGVISALVALLVFILMVVFRGRLFCNTLCPVGTLLSLISRYSFFRISFDKEACTHCGNC
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCEEEEEECHHHHHCCCCC
EHTCKAEAIDSKNLTVDTSRCVDCFNCVSSCAKGGLQYRFKPSFKKEAETARAQTDVIQQ
CCCCHHHCCCCCCCEECHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH
ATAPNSRRTFLSAGATVAVSLPIVSTIAQGMEKGHGKGQHGQGKHGNKWPPIVPPGAISL
HCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ERFKDVCTGCQICVTQCPSHVLRPTGLEYGFDYMLKPRIAYIDSYCNYECTVCSEVCPTH
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCHHHHHHHHCCCCEEEHHHHCCHH
AIKPLTKEEKATTQVGIATFFINRCIVKTEGTDCGACSEHCPTQAVHMVPYEGTLTIPQV
HCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCCCCEEEECCCCEEECCCC
NPDLCIGCGGCESICPVRPMRAIIIKANEVHKFVEKPKEEEVKKVEIDDFGF
CCCEEEECCCCCCCCCCCCCHHEEEEHHHHHHHHHCCCHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]