| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is tgt [H]
Identifier: 150007423
GI number: 150007423
Start: 905737
End: 906867
Strand: Reverse
Name: tgt [H]
Synonym: BDI_0774
Alternate gene names: 150007423
Gene position: 906867-905737 (Counterclockwise)
Preceding gene: 150007424
Following gene: 150007422
Centisome position: 18.85
GC content: 50.84
Gene sequence:
>1131_bases ATGACATTTGAATTACAGTATAACGATACGAAATCGAACGCTAGGGCGGGCTTGATTACCACCGATCACGGGGTAATCGA GACGCCTATTTTTATGCCCGTGGGTACGCAAGGTACGGTAAAGGGTGTACATATGACCGAGCTAAAGGAAGATACCAAGG CACAAATCATTTTGGGGAATACGTACCATCTGTATCTTCGTCCCGGTATCCAGATCTTGGAGCAGGCCGGAGGCTTGCAT AAGTTTAATACATGGGATCGCCCGATATTGACCGATAGCGGGGGGTTTCAGGTATTCTCTCTTTCCGACAATCGTAAGCT GCATGAAGAGGGAGCCGAGTTCCGCTCGCATCTCGACGGCTCCAAGCATATGTTCACGCCGGAGAAGGTGATGGATATCG AACGCTCTATCGGTGCGGATATCATCATGGCCTTCGATGAGTGTTGCCCGGGAGATGCCGACTACAATTACGCCAAGCAA TCACTGGGCCTGACCGAGCGTTGGCTGGATCGTTGTTTCGCCCGCTTCAACAGCACGGAGCCGAAATACGGCTACCGGCA AAGTCTCTTCCCGATCGTACAGGGATGCGTCTATACGGACTTGCGGCAGAGGGCGGCGGAGAACGTGGCCCGAAAAGGCG CCGATGGAAACGCTATCGGGGGACTGGCCGTTGGCGAGCCTACCGATAAGATGTATGAGATGATCGAGGTCGTAAACGAT ATCTTACCGAAAGATAAACCTCGTTACTTGATGGGCGTAGGTACCCCGATCAATTTACTGGAAGGGATCGAACGAGGCAT CGATATGTTCGACTGTATCATGCCAACCCGCAACGGGCGCAACGGCCAACTTTTCACGCGTTTCGGTACTATCAATATGC GTAACAAGAAATGGGAGAACGATTTCTCGCCGGTCGATCCGGACGGACATTCCTACGTGGATACCTTATATAGCAAGGCT TATCTGCACCACTTGATCAAGGCGAAAGAAATGCTTGGCTTACAGATCGCTTCTATCCATAACCTCGCCTTCTACCTATG GTTGGTGAAAGAAGCGAGGGCACATATCATCGCTGGCGATTTTACTACATGGAAAAGTGGTATGGTCCGTCAATTAGCGA ACCGGTTATAA
Upstream 100 bases:
>100_bases GTTCGTGGAGAAGCCTAAAGAGGAAGAGGTGAAAAAGGTAGAAATAGATGACTTCGGATTCTAAGAGAAAAATGCTACCT TTGTCACAAATTTTTGATAC
Downstream 100 bases:
>100_bases AAAACGAGACAGATGAAATTTAAACTAAAACGGATCGATTGGTATATCATCAAGCAGTTTCTGGGCACGTACGTGTTCGC TATCGCCTTGATTATCTCTA
Product: tRNA-guanine transglycosylase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTFELQYNDTKSNARAGLITTDHGVIETPIFMPVGTQGTVKGVHMTELKEDTKAQIILGNTYHLYLRPGIQILEQAGGLH KFNTWDRPILTDSGGFQVFSLSDNRKLHEEGAEFRSHLDGSKHMFTPEKVMDIERSIGADIIMAFDECCPGDADYNYAKQ SLGLTERWLDRCFARFNSTEPKYGYRQSLFPIVQGCVYTDLRQRAAENVARKGADGNAIGGLAVGEPTDKMYEMIEVVND ILPKDKPRYLMGVGTPINLLEGIERGIDMFDCIMPTRNGRNGQLFTRFGTINMRNKKWENDFSPVDPDGHSYVDTLYSKA YLHHLIKAKEMLGLQIASIHNLAFYLWLVKEARAHIIAGDFTTWKSGMVRQLANRL
Sequences:
>Translated_376_residues MTFELQYNDTKSNARAGLITTDHGVIETPIFMPVGTQGTVKGVHMTELKEDTKAQIILGNTYHLYLRPGIQILEQAGGLH KFNTWDRPILTDSGGFQVFSLSDNRKLHEEGAEFRSHLDGSKHMFTPEKVMDIERSIGADIIMAFDECCPGDADYNYAKQ SLGLTERWLDRCFARFNSTEPKYGYRQSLFPIVQGCVYTDLRQRAAENVARKGADGNAIGGLAVGEPTDKMYEMIEVVND ILPKDKPRYLMGVGTPINLLEGIERGIDMFDCIMPTRNGRNGQLFTRFGTINMRNKKWENDFSPVDPDGHSYVDTLYSKA YLHHLIKAKEMLGLQIASIHNLAFYLWLVKEARAHIIAGDFTTWKSGMVRQLANRL >Mature_375_residues TFELQYNDTKSNARAGLITTDHGVIETPIFMPVGTQGTVKGVHMTELKEDTKAQIILGNTYHLYLRPGIQILEQAGGLHK FNTWDRPILTDSGGFQVFSLSDNRKLHEEGAEFRSHLDGSKHMFTPEKVMDIERSIGADIIMAFDECCPGDADYNYAKQS LGLTERWLDRCFARFNSTEPKYGYRQSLFPIVQGCVYTDLRQRAAENVARKGADGNAIGGLAVGEPTDKMYEMIEVVNDI LPKDKPRYLMGVGTPINLLEGIERGIDMFDCIMPTRNGRNGQLFTRFGTINMRNKKWENDFSPVDPDGHSYVDTLYSKAY LHHLIKAKEMLGLQIASIHNLAFYLWLVKEARAHIIAGDFTTWKSGMVRQLANRL
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=352, Percent_Identity=40.0568181818182, Blast_Score=283, Evalue=2e-76, Organism=Escherichia coli, GI1786607, Length=364, Percent_Identity=50.5494505494505, Blast_Score=363, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17544680, Length=344, Percent_Identity=38.6627906976744, Blast_Score=249, Evalue=1e-66, Organism=Caenorhabditis elegans, GI25146502, Length=143, Percent_Identity=28.6713286713287, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920510, Length=364, Percent_Identity=42.5824175824176, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI21355311, Length=275, Percent_Identity=25.4545454545455, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42496; Mature: 42365
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFELQYNDTKSNARAGLITTDHGVIETPIFMPVGTQGTVKGVHMTELKEDTKAQIILGN CEEEEEECCCCCCCCCCEEECCCCCEECCEEEECCCCCCCCCCCHHHHCCCCCEEEEECC TYHLYLRPGIQILEQAGGLHKFNTWDRPILTDSGGFQVFSLSDNRKLHEEGAEFRSHLDG EEEEEECCHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCC SKHMFTPEKVMDIERSIGADIIMAFDECCPGDADYNYAKQSLGLTERWLDRCFARFNSTE CCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC PKYGYRQSLFPIVQGCVYTDLRQRAAENVARKGADGNAIGGLAVGEPTDKMYEMIEVVND CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ILPKDKPRYLMGVGTPINLLEGIERGIDMFDCIMPTRNGRNGQLFTRFGTINMRNKKWEN HCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCC DFSPVDPDGHSYVDTLYSKAYLHHLIKAKEMLGLQIASIHNLAFYLWLVKEARAHIIAGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC FTTWKSGMVRQLANRL CHHHHHHHHHHHHHCC >Mature Secondary Structure TFELQYNDTKSNARAGLITTDHGVIETPIFMPVGTQGTVKGVHMTELKEDTKAQIILGN EEEEEECCCCCCCCCCEEECCCCCEECCEEEECCCCCCCCCCCHHHHCCCCCEEEEECC TYHLYLRPGIQILEQAGGLHKFNTWDRPILTDSGGFQVFSLSDNRKLHEEGAEFRSHLDG EEEEEECCHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCC SKHMFTPEKVMDIERSIGADIIMAFDECCPGDADYNYAKQSLGLTERWLDRCFARFNSTE CCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC PKYGYRQSLFPIVQGCVYTDLRQRAAENVARKGADGNAIGGLAVGEPTDKMYEMIEVVND CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ILPKDKPRYLMGVGTPINLLEGIERGIDMFDCIMPTRNGRNGQLFTRFGTINMRNKKWEN HCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCC DFSPVDPDGHSYVDTLYSKAYLHHLIKAKEMLGLQIASIHNLAFYLWLVKEARAHIIAGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC FTTWKSGMVRQLANRL CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]