| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007361
Identifier: 150007361
GI number: 150007361
Start: 843455
End: 844744
Strand: Reverse
Name: 150007361
Synonym: BDI_0712
Alternate gene names: NA
Gene position: 844744-843455 (Counterclockwise)
Preceding gene: 150007362
Following gene: 150007359
Centisome position: 17.56
GC content: 47.44
Gene sequence:
>1290_bases TTGCCCAACCCCGGCTGTCATCCGGATCAGCTCCGTTTACGAACGGTAATTTTGATACAAAGATCCGTAATATGTATACA TGCGCCTGAGATAAATCCGAATATCTTTGTAATGTTAAACAATAATGATATCCTTATGAAAACAAAAGCAATCGCACTCT TCCTGCTAGGCTTCATACCAGCCTTCGCACAAGATATCCCAACTTCTAAAACAGAACAAAATATGGACAGAATCGAACGC TGTAAAAAGAATTACACCGAGCTATTCGGAGGCGAGGCATTGACCGGACAAGGAACAGATCCGGAAATGATGGACATTCT CCAGAAATTCATCTTCGGGGAGGTATTCCGCACAGGAGATCTTGATAAAAAGACCCGGGAGCTTATCACTTGCACCGTAT TAGCCACGATGCAAACCTTGCCCCAACTGAACGCCCACGCCAAAGCGGCGCTAAACGTAGGCGTCACTCCCATCGAGCTA CGGGAGGCGATATACCTATGCGCTCCGTTTATCGGTTTCCCGAAGACATTGAATGCCTTAAATACCATCAACGAAGTCTT TAAGCAACAAGGCATCGCTTTGCCTCTGGAGAGACAAGCTACCGTTACGGAAGAAGATCGCCACGAGAAAGGACAAGCCA TACAAAGCCGGCTTTACGGCGAGGGAATCAAAGAGGCCATGAGGAACGTCCCGGGAAATATGGGTCCGGAAGTAGAGCGA TTCCTCACCGAATTCTGCTTCGGAGATATCTATACTCGCAACGGGCTAGACCTGAAAACCCGGGAGTTACTGGCTTATTG CATACTAACGACCCTTGAAGCCGAAAGCCAACTACACTCGCATCTCGAAGGGAACTTACTGGCCGGCAATAGCAAGGAGA CCTTAACGGCGGCGGTTATACAATGTCTTCCTTATATCGGCTTCCCTTCCGCTATCAAAGCGTTGAAAATCATTAAGGAA TCCTCTCAGCCCGCCCCAAAGAAGAACTTAGTCCGCCTATCCAAGATCACGGTCGATCCCGCCCAGTTGGAGCGTTATAA CGCCTTTCTGGAAGAAGAGATCGAGGCTTCCATGCGTCTAGAGCCGGGTGTTCTTACACTGTATGCCGTATCGGAGAAAG AACATCCAAATAAAGTAACCATCCTAGAGATTTACGCAGATCAAGACGCTTATAAAAGCCATATCCAAACGCCCCATTTC CAGAAATACAAACAAGGAACATTACAGATGGTGCAAGAGTTGGAGCTGGTAGATAGCACGCCCCTGATCCCCGGACTAAA GATAAAATAA
Upstream 100 bases:
>100_bases ATGGTGGAAAGCCTTATATCCGGATCGTACTTTATAAGAATATTTATTTGAACGAAAGCGCCTGTGTCTCCCGCGAGGGA ATCGCAGGCGCTTTATTCGT
Downstream 100 bases:
>100_bases AACAAGAATCCCCGCTTTCCGGCACGAAGCCATCTAAGCGGGGATTTCATATATCCGTGAAAATCTAAATGACTTGTTAT TCGATCATTTGATATTCGGA
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Antibiotic Biosynthesis Monooxygenase; Carboxymuconolactone Decarboxylase Family Protein; Gamma-Carboxymuconolactone Decarboxylase; Flavoredoxin; Alpha/Beta Hydrolase; Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase Subunit; Carboxymuconolactone Decarboxylase-Like Protein; Antibiotic Biosynthesis Monooxygenase Family Protein; Antibiotic Biosynthesis Monooxygenase Protein; Decarboxylase
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPNPGCHPDQLRLRTVILIQRSVICIHAPEINPNIFVMLNNNDILMKTKAIALFLLGFIPAFAQDIPTSKTEQNMDRIER CKKNYTELFGGEALTGQGTDPEMMDILQKFIFGEVFRTGDLDKKTRELITCTVLATMQTLPQLNAHAKAALNVGVTPIEL REAIYLCAPFIGFPKTLNALNTINEVFKQQGIALPLERQATVTEEDRHEKGQAIQSRLYGEGIKEAMRNVPGNMGPEVER FLTEFCFGDIYTRNGLDLKTRELLAYCILTTLEAESQLHSHLEGNLLAGNSKETLTAAVIQCLPYIGFPSAIKALKIIKE SSQPAPKKNLVRLSKITVDPAQLERYNAFLEEEIEASMRLEPGVLTLYAVSEKEHPNKVTILEIYADQDAYKSHIQTPHF QKYKQGTLQMVQELELVDSTPLIPGLKIK
Sequences:
>Translated_429_residues MPNPGCHPDQLRLRTVILIQRSVICIHAPEINPNIFVMLNNNDILMKTKAIALFLLGFIPAFAQDIPTSKTEQNMDRIER CKKNYTELFGGEALTGQGTDPEMMDILQKFIFGEVFRTGDLDKKTRELITCTVLATMQTLPQLNAHAKAALNVGVTPIEL REAIYLCAPFIGFPKTLNALNTINEVFKQQGIALPLERQATVTEEDRHEKGQAIQSRLYGEGIKEAMRNVPGNMGPEVER FLTEFCFGDIYTRNGLDLKTRELLAYCILTTLEAESQLHSHLEGNLLAGNSKETLTAAVIQCLPYIGFPSAIKALKIIKE SSQPAPKKNLVRLSKITVDPAQLERYNAFLEEEIEASMRLEPGVLTLYAVSEKEHPNKVTILEIYADQDAYKSHIQTPHF QKYKQGTLQMVQELELVDSTPLIPGLKIK >Mature_428_residues PNPGCHPDQLRLRTVILIQRSVICIHAPEINPNIFVMLNNNDILMKTKAIALFLLGFIPAFAQDIPTSKTEQNMDRIERC KKNYTELFGGEALTGQGTDPEMMDILQKFIFGEVFRTGDLDKKTRELITCTVLATMQTLPQLNAHAKAALNVGVTPIELR EAIYLCAPFIGFPKTLNALNTINEVFKQQGIALPLERQATVTEEDRHEKGQAIQSRLYGEGIKEAMRNVPGNMGPEVERF LTEFCFGDIYTRNGLDLKTRELLAYCILTTLEAESQLHSHLEGNLLAGNSKETLTAAVIQCLPYIGFPSAIKALKIIKES SQPAPKKNLVRLSKITVDPAQLERYNAFLEEEIEASMRLEPGVLTLYAVSEKEHPNKVTILEIYADQDAYKSHIQTPHFQ KYKQGTLQMVQELELVDSTPLIPGLKIK
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48105; Mature: 47974
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPGCHPDQLRLRTVILIQRSVICIHAPEINPNIFVMLNNNDILMKTKAIALFLLGFIP CCCCCCCHHHHHHHHHHHEECCEEEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHH AFAQDIPTSKTEQNMDRIERCKKNYTELFGGEALTGQGTDPEMMDILQKFIFGEVFRTGD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCC LDKKTRELITCTVLATMQTLPQLNAHAKAALNVGVTPIELREAIYLCAPFIGFPKTLNAL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH NTINEVFKQQGIALPLERQATVTEEDRHEKGQAIQSRLYGEGIKEAMRNVPGNMGPEVER HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FLTEFCFGDIYTRNGLDLKTRELLAYCILTTLEAESQLHSHLEGNLLAGNSKETLTAAVI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH QCLPYIGFPSAIKALKIIKESSQPAPKKNLVRLSKITVDPAQLERYNAFLEEEIEASMRL HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHEEHHHEECCHHHHHHHHHHHHHHHHHHHCC EPGVLTLYAVSEKEHPNKVTILEIYADQDAYKSHIQTPHFQKYKQGTLQMVQELELVDST CCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC PLIPGLKIK CCCCCCCCC >Mature Secondary Structure PNPGCHPDQLRLRTVILIQRSVICIHAPEINPNIFVMLNNNDILMKTKAIALFLLGFIP CCCCCCHHHHHHHHHHHEECCEEEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHH AFAQDIPTSKTEQNMDRIERCKKNYTELFGGEALTGQGTDPEMMDILQKFIFGEVFRTGD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCC LDKKTRELITCTVLATMQTLPQLNAHAKAALNVGVTPIELREAIYLCAPFIGFPKTLNAL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH NTINEVFKQQGIALPLERQATVTEEDRHEKGQAIQSRLYGEGIKEAMRNVPGNMGPEVER HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FLTEFCFGDIYTRNGLDLKTRELLAYCILTTLEAESQLHSHLEGNLLAGNSKETLTAAVI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH QCLPYIGFPSAIKALKIIKESSQPAPKKNLVRLSKITVDPAQLERYNAFLEEEIEASMRL HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHEEHHHEECCHHHHHHHHHHHHHHHHHHHCC EPGVLTLYAVSEKEHPNKVTILEIYADQDAYKSHIQTPHFQKYKQGTLQMVQELELVDST CCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC PLIPGLKIK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA