| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yuxL [H]
Identifier: 150007362
GI number: 150007362
Start: 844808
End: 847300
Strand: Reverse
Name: yuxL [H]
Synonym: BDI_0713
Alternate gene names: 150007362
Gene position: 847300-844808 (Counterclockwise)
Preceding gene: 150007363
Following gene: 150007361
Centisome position: 17.61
GC content: 51.83
Gene sequence:
>2493_bases ATGGACAGAAAAACTAACTTAATTCCGGCATTGCTTCTTTCCGCCCTTTCGCTTTACGCCATGGAAGACGTGAAAGTAAC GCAATTCCAGCACGCAGGCCCGTTCACGGTCAACAAGCCGATCCTAGCGGACAGCCTCAACGTAAACGGCAAGCCTTTCG AGGCGAAGAATCTATTAAAAGCGACCTTACCGTTCGAGCAAACGCTTGCGAACGCCACGGTACTCGACGCTGACACGGCA GGCGCAATCACCTTCGCTGCCCCGCGAAAAGGATATGCCCTGCATCTATTCTCTTTCTTCTTGAACAGCGACCGATACGT AAAAGGCACGCTCGATATATCGGGTCCCGGGGCGTTCGAAGTATTCGTCAATGATAAACCGGTCGGAGCCTCCTCCGAGT TGGTGATGGAACCCCGCCGCTATCAAGTAGTCGTTAAATACCTGACAGCGGAAACAGACACTTGTCCTCCCAGCCTAAAG GCTACCTTCAAGAGCGAGGCGGAAGCGAAAGTCGTAGCTTCCTTGAACCCGGAGAAACGCTACACCCTTCTGAATATCCT AGAAGGAAAGGATTTCCAAGGCGTAAGTGTCTCCCCGAACGGAAAGTATGCCTTGGTAAAATACGTCAACCGGTTCCCGG AGAGCAAGAGCGAATCGTACGGGCAATTGATGGATGCCGCTACGGGACGGGTCTTATTGCAAGACGGAGGTTTCTTGACA ACCGCCAAATGGATGCCTAAAAGCAACCGATTGTATTACACCCGCACCGGTCTGGACGGTACGGAGTTGGTAACCGTAGA TCCGTCTACCTACCAACAAACGGTATTAGTCCCGAACCTTCCGAAAGGGCGGTTCGTATTCACCCCCGATGAGTCCACGC TTCTCTATACCGTAGAAGAGGAAGGTCCCAAGGAAGGGACGGACTTGATCCGTGTATTAGAGCCGGCAGACCGCATCCCG GGTTTCCGTGACCGCTCCTTCATCTGGCGTTATGACTTAAAAACAGGTTTGTACGAGCAACTTACTTTCGGGCATACGGA CACTTATATCAATGATATCAGCGCTGATAGCCGCTATCTATTGTTCAGCACCAGCGACCGGGTGTACACCTCCTTGCCGC ACTCCCGCAACTCCCTTTATAAATTGGATTTGCAGACCATGGCGATCGATACGATCTGGGAGAAAGCCCCGTACGTAAAC CAAGCCGCCTTCTCGCCCGACGGTAAACAGTTATTGGTAGCTGGGGCAGGCGACGCTTTCGACGGGATCGGACGAAATAT CAAGCAAGGACAGATCTCCAACTCGTACGACGGGCAGTTATTCCTATACGATCTGGCAAGCCGTAAAGCCTCCCCTCTCA CCAAGGACTTCAATCCGAACGTGATCGATGCCGTATGGAACCGCTTCAACGGGCAAATCTATATCCTCTGCGAGGATGAG GATTATCAACGGATCTATACGTGCGACCCAGCAAACGGGAAGATCAAGCAAGTAGCCGCCTCCGAGGATATTATCATGTC GTATGCGTTGGCCGACAACGCTCCGGTTCTCTTCTATTACGGACAGAGCGCGTCCAACGCCAACCGCCTTTACGCTTACG ACCTGAAAGGAGGAAAGAACCGCTTGGTGTATGATCTCTCGCAAGATAAATTAAAAGATATCGCCTTAGGAGAGGTACAC GACTGGAACTTCAAGTCGGATGACGGGACGACTATCCAAGGTCGTTATTACCTGCCGCCTCATTTCGATCCGAATAAGAA ATATCCGATGATCGTTTATTACTATGGCGGTACTTCCCCGACGAACCGTGCGCTGGAGATGCGTTATTCCATGCATATGT ACGCCGCCCTCGGATACGTGGTCTACACCTTGAATCCGAGTGGAACAACGGGCTTCGGACAGGAATTCGCCGCCCGCCAT GTGAACGCATGGGGCCTGAAGACCGCCGATGAGATCATCCAAGGTACCAAGCTGTTCTGTAAGGAGCATTCGTTCGTGAA CGAGAAGAAAATCGGTTGCATCGGTGCCAGCTACGGCGGATTCATGACACAATACCTACAAACCCGTACGGACATTTTCG CCGCCGCTATCAGCCATGCCGGTATCAGCGCGTTGAGTAGCTATTGGGGAGAAGGTTATTGGGGATATGGCTATTGCTCC GTAGCGAACGCCGGGACTTATCCTTGGAACGCCCCGGAGTTCTTTACCAAGCAAAGCCCGTTGTTCAACGCCGATAAGAT CAATACCCCGCTCCTATTGCTTCACGGCAACGCCGATACGAACGTACCCATCGGGGAAAGTATCCAGATGTTCGCCGCCT TGAAGATCCTAGGAAAGACCGTGGAATTCGTGCAGGTAGATGGCGAGAATCATGGTATCGTAGGTTATCAGAAGCGTATA GGCTGGCAAAATACCATCTACGCATGGTTCGCCAAATGGCTGAAAGACGAGCCGGAATGGTGGAAAGCCTTATATCCGGA TCGTACTTTATAA
Upstream 100 bases:
>100_bases TGGCGGCATTGATGGAGCCTTATCTTCTTCCGCTCGTCGTAGAGGATACCGAACAGCTTTACATCGTTTGCGGAAAACGT TTATCCTAAACTAATTATAT
Downstream 100 bases:
>100_bases GAATATTTATTTGAACGAAAGCGCCTGTGTCTCCCGCGAGGGAATCGCAGGCGCTTTATTCGTTTGCCCAACCCCGGCTG TCATCCGGATCAGCTCCGTT
Product: putative alanyl dipeptidyl peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MDRKTNLIPALLLSALSLYAMEDVKVTQFQHAGPFTVNKPILADSLNVNGKPFEAKNLLKATLPFEQTLANATVLDADTA GAITFAAPRKGYALHLFSFFLNSDRYVKGTLDISGPGAFEVFVNDKPVGASSELVMEPRRYQVVVKYLTAETDTCPPSLK ATFKSEAEAKVVASLNPEKRYTLLNILEGKDFQGVSVSPNGKYALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLT TAKWMPKSNRLYYTRTGLDGTELVTVDPSTYQQTVLVPNLPKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIP GFRDRSFIWRYDLKTGLYEQLTFGHTDTYINDISADSRYLLFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVN QAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQIYILCEDE DYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYAYDLKGGKNRLVYDLSQDKLKDIALGEVH DWNFKSDDGTTIQGRYYLPPHFDPNKKYPMIVYYYGGTSPTNRALEMRYSMHMYAALGYVVYTLNPSGTTGFGQEFAARH VNAWGLKTADEIIQGTKLFCKEHSFVNEKKIGCIGASYGGFMTQYLQTRTDIFAAAISHAGISALSSYWGEGYWGYGYCS VANAGTYPWNAPEFFTKQSPLFNADKINTPLLLLHGNADTNVPIGESIQMFAALKILGKTVEFVQVDGENHGIVGYQKRI GWQNTIYAWFAKWLKDEPEWWKALYPDRTL
Sequences:
>Translated_830_residues MDRKTNLIPALLLSALSLYAMEDVKVTQFQHAGPFTVNKPILADSLNVNGKPFEAKNLLKATLPFEQTLANATVLDADTA GAITFAAPRKGYALHLFSFFLNSDRYVKGTLDISGPGAFEVFVNDKPVGASSELVMEPRRYQVVVKYLTAETDTCPPSLK ATFKSEAEAKVVASLNPEKRYTLLNILEGKDFQGVSVSPNGKYALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLT TAKWMPKSNRLYYTRTGLDGTELVTVDPSTYQQTVLVPNLPKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIP GFRDRSFIWRYDLKTGLYEQLTFGHTDTYINDISADSRYLLFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVN QAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQIYILCEDE DYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYAYDLKGGKNRLVYDLSQDKLKDIALGEVH DWNFKSDDGTTIQGRYYLPPHFDPNKKYPMIVYYYGGTSPTNRALEMRYSMHMYAALGYVVYTLNPSGTTGFGQEFAARH VNAWGLKTADEIIQGTKLFCKEHSFVNEKKIGCIGASYGGFMTQYLQTRTDIFAAAISHAGISALSSYWGEGYWGYGYCS VANAGTYPWNAPEFFTKQSPLFNADKINTPLLLLHGNADTNVPIGESIQMFAALKILGKTVEFVQVDGENHGIVGYQKRI GWQNTIYAWFAKWLKDEPEWWKALYPDRTL >Mature_830_residues MDRKTNLIPALLLSALSLYAMEDVKVTQFQHAGPFTVNKPILADSLNVNGKPFEAKNLLKATLPFEQTLANATVLDADTA GAITFAAPRKGYALHLFSFFLNSDRYVKGTLDISGPGAFEVFVNDKPVGASSELVMEPRRYQVVVKYLTAETDTCPPSLK ATFKSEAEAKVVASLNPEKRYTLLNILEGKDFQGVSVSPNGKYALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLT TAKWMPKSNRLYYTRTGLDGTELVTVDPSTYQQTVLVPNLPKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIP GFRDRSFIWRYDLKTGLYEQLTFGHTDTYINDISADSRYLLFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVN QAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQIYILCEDE DYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYAYDLKGGKNRLVYDLSQDKLKDIALGEVH DWNFKSDDGTTIQGRYYLPPHFDPNKKYPMIVYYYGGTSPTNRALEMRYSMHMYAALGYVVYTLNPSGTTGFGQEFAARH VNAWGLKTADEIIQGTKLFCKEHSFVNEKKIGCIGASYGGFMTQYLQTRTDIFAAAISHAGISALSSYWGEGYWGYGYCS VANAGTYPWNAPEFFTKQSPLFNADKINTPLLLLHGNADTNVPIGESIQMFAALKILGKTVEFVQVDGENHGIVGYQKRI GWQNTIYAWFAKWLKDEPEWWKALYPDRTL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI18450280, Length=243, Percent_Identity=27.9835390946502, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI37577089, Length=243, Percent_Identity=27.9835390946502, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI16933540, Length=254, Percent_Identity=25.5905511811024, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI18765694, Length=223, Percent_Identity=25.5605381165919, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI194394146, Length=240, Percent_Identity=24.5833333333333, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17552908, Length=288, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25144537, Length=379, Percent_Identity=23.7467018469657, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI25144540, Length=379, Percent_Identity=23.7467018469657, Blast_Score=79, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17508019, Length=224, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508017, Length=224, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324793, Length=264, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 92856; Mature: 92856
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKTNLIPALLLSALSLYAMEDVKVTQFQHAGPFTVNKPILADSLNVNGKPFEAKNLLK CCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCEEECCCCCCCCCCHHHHHHH ATLPFEQTLANATVLDADTAGAITFAAPRKGYALHLFSFFLNSDRYVKGTLDISGPGAFE HCCCHHHHHCCCEEEECCCCCEEEEECCCCCCEEEEEHHHHCCCCEEEEEEEECCCCEEE VFVNDKPVGASSELVMEPRRYQVVVKYLTAETDTCPPSLKATFKSEAEAKVVASLNPEKR EEECCCCCCCCCCEEECCHHHEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCCCC YTLLNILEGKDFQGVSVSPNGKYALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLT EEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCEEE TAKWMPKSNRLYYTRTGLDGTELVTVDPSTYQQTVLVPNLPKGRFVFTPDESTLLYTVEE EEECCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEEEECC EGPKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYINDISADSRYL CCCCCCHHHHHHHCHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEE LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAF EEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCH DGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQIYILCEDE HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC DYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYAYDLKGGKN CCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCC RLVYDLSQDKLKDIALGEVHDWNFKSDDGTTIQGRYYLPPHFDPNKKYPMIVYYYGGTSP CEEEECCHHHHHHCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCC TNRALEMRYSMHMYAALGYVVYTLNPSGTTGFGQEFAARHVNAWGLKTADEIIQGTKLFC CCCEEEEHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCHHHHH KEHSFVNEKKIGCIGASYGGFMTQYLQTRTDIFAAAISHAGISALSSYWGEGYWGYGYCS HCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE VANAGTYPWNAPEFFTKQSPLFNADKINTPLLLLHGNADTNVPIGESIQMFAALKILGKT ECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC VEFVQVDGENHGIVGYQKRIGWQNTIYAWFAKWLKDEPEWWKALYPDRTL EEEEEECCCCCCEEEHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure MDRKTNLIPALLLSALSLYAMEDVKVTQFQHAGPFTVNKPILADSLNVNGKPFEAKNLLK CCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCEEECCCCCCCCCCHHHHHHH ATLPFEQTLANATVLDADTAGAITFAAPRKGYALHLFSFFLNSDRYVKGTLDISGPGAFE HCCCHHHHHCCCEEEECCCCCEEEEECCCCCCEEEEEHHHHCCCCEEEEEEEECCCCEEE VFVNDKPVGASSELVMEPRRYQVVVKYLTAETDTCPPSLKATFKSEAEAKVVASLNPEKR EEECCCCCCCCCCEEECCHHHEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCCCC YTLLNILEGKDFQGVSVSPNGKYALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLT EEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCEEE TAKWMPKSNRLYYTRTGLDGTELVTVDPSTYQQTVLVPNLPKGRFVFTPDESTLLYTVEE EEECCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEEEECC EGPKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYINDISADSRYL CCCCCCHHHHHHHCHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEE LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAF EEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCH DGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQIYILCEDE HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC DYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYAYDLKGGKN CCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCC RLVYDLSQDKLKDIALGEVHDWNFKSDDGTTIQGRYYLPPHFDPNKKYPMIVYYYGGTSP CEEEECCHHHHHHCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCC TNRALEMRYSMHMYAALGYVVYTLNPSGTTGFGQEFAARHVNAWGLKTADEIIQGTKLFC CCCEEEEHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCHHHHH KEHSFVNEKKIGCIGASYGGFMTQYLQTRTDIFAAAISHAGISALSSYWGEGYWGYGYCS HCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE VANAGTYPWNAPEFFTKQSPLFNADKINTPLLLLHGNADTNVPIGESIQMFAALKILGKT ECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC VEFVQVDGENHGIVGYQKRIGWQNTIYAWFAKWLKDEPEWWKALYPDRTL EEEEEECCCCCCEEEHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]