| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007353
Identifier: 150007353
GI number: 150007353
Start: 832752
End: 834062
Strand: Reverse
Name: 150007353
Synonym: BDI_0704
Alternate gene names: NA
Gene position: 834062-832752 (Counterclockwise)
Preceding gene: 150007354
Following gene: 150007352
Centisome position: 17.34
GC content: 45.16
Gene sequence:
>1311_bases ATGGACAAAGTATATATTATCAGCGGTCTCTTATCCTTCCTATCCTTCCCGTTAATCGCACAAAACAGCGATTATCAAGC GCAATATAGGGAAAAAGTCTTGGAATACAACCAAGACTTGAAAGCAGCGGGATACAACGAGGCCATGAAACAGGAAATGA TCAAATCGGCCCGTGCGGATTTCAAACCGAAACTCTCGGCGGAAGGTAATTTCAATTATACCGGTAATCCGCTAGAATTA TCGATTGATTTGCCATCTATGAATTCCCCCCTTTATTTTCAAGGTAAAGATCTGAAATATGGGGCGACTCTCTCCCTCTC GCAACCGATTTATACCGGAGGCGGCATTCGTGCCAACTACCAAAAAGCACGGCAAGAAAAAGAGTTGGCATCCAATGAAT CCGATCGTATAAAAAGCAATACCCTACACGACGCCGATATCTACTATTGGAATGCGGTAGCCCAGCACGAGCTGGTTTTC GTGGCACAGGCATTTCGTACATCCATACAGCAACTGGTGGACGTCGTACGCCACCGGGTAGAAGTCGAATACATCGATCG AAACGATCTTCTTATGGCGGAGGTAAAGCTAAACGATGCAGATTTCCAGTTATTGCAAACTCGTGATAACGCCGAGATCG CACGTTTGGCCCTTAATTCTTTCGCTGGTGTAAACCCGAGCGATACCTTGCCGATCGATCATTCCGTAATCGCCCTCAAA CAATTTATCCCTTTATCGGATGAGATAGATAACGCGATAACCAGCAGGCCGGAATACCGGATCGCCAAAAACAAGATCGA GTTACAGGAATCATCCCGGAAAATAGCGGATGCCCATTTCTTACCCCAATTCCATATTGGAGTAGATGGAAGTTATTCCT CACCGGGCTATAACTTCAAATCCGACCTAGATCCGAACTATGCGATCTACGCCAAGCTCAGTATCCCGCTCTTCGAATGG GGAAAACGTAAGAGTACCCGCAACGCTTCCTCGTACGCCATCAATATGGCTCAACAGAATCTCAGCAAGACGCAAGATAA GATCCGGCTGGAAATACAAACCGCCCATTACAACTATAAACAAGCTATCGATAAAGTCGAACTAACCGAGAGCTCATTAT CAAAAGCATCCGAAAGTGAGCAAATGGCCATGGAGCGTTATAAGGAGGGGAATGTTTCCATCGTCGAGGTTATCAACGCT CAATTATATCATCAGCAAGCTCAGGTTAATTATATACAATCCAAACTAAACGCACAGATGGCGAAGACGGATTTCGAACG GGCAATTTATTATCTTCGCGAAAAAGAATAG
Upstream 100 bases:
>100_bases CTTCGGACTCACCTTCGCCACCTTACTTACGTTATTCGTAACCCCGACGTTATACGCATTGTTTTACCGGATTCATTCAC CTCACAAATAAACGATAAAA
Downstream 100 bases:
>100_bases GTCATGAAAGAAATATCATACGGGAAATCGGCATGTATCCTTTTGTTTTCGGCATTAGGGGTCTTTTCCTATTTCTTGCT GTTATATCATACGGAGCTAC
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; Type I Secretion Outer Membrane Protein; Acriflavin Resistance Protein; RND Efflux System Outer Membrane Lipoprotein; Outer Membrane Protein-Like
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE
Sequences:
>Translated_436_residues MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE >Mature_436_residues MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49734; Mature: 49734
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARAD CCCEEEHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC FKPKLSAEGNFNYTGNPLELSIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANY CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCCCCCH QKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVFVAQAFRTSIQQLVDVVRHRV HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE EVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK EEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFK HHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC SDLDPNYAIYAKLSIPLFEWGKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYK CCCCCCEEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH QAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINAQLYHQQAQVNYIQSKLNAQM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AKTDFERAIYYLREKE HHHHHHHHHHHHHCCC >Mature Secondary Structure MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARAD CCCEEEHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC FKPKLSAEGNFNYTGNPLELSIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANY CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCCCCCH QKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVFVAQAFRTSIQQLVDVVRHRV HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE EVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK EEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFK HHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC SDLDPNYAIYAKLSIPLFEWGKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYK CCCCCCEEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH QAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINAQLYHQQAQVNYIQSKLNAQM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AKTDFERAIYYLREKE HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA