Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007353

Identifier: 150007353

GI number: 150007353

Start: 832752

End: 834062

Strand: Reverse

Name: 150007353

Synonym: BDI_0704

Alternate gene names: NA

Gene position: 834062-832752 (Counterclockwise)

Preceding gene: 150007354

Following gene: 150007352

Centisome position: 17.34

GC content: 45.16

Gene sequence:

>1311_bases
ATGGACAAAGTATATATTATCAGCGGTCTCTTATCCTTCCTATCCTTCCCGTTAATCGCACAAAACAGCGATTATCAAGC
GCAATATAGGGAAAAAGTCTTGGAATACAACCAAGACTTGAAAGCAGCGGGATACAACGAGGCCATGAAACAGGAAATGA
TCAAATCGGCCCGTGCGGATTTCAAACCGAAACTCTCGGCGGAAGGTAATTTCAATTATACCGGTAATCCGCTAGAATTA
TCGATTGATTTGCCATCTATGAATTCCCCCCTTTATTTTCAAGGTAAAGATCTGAAATATGGGGCGACTCTCTCCCTCTC
GCAACCGATTTATACCGGAGGCGGCATTCGTGCCAACTACCAAAAAGCACGGCAAGAAAAAGAGTTGGCATCCAATGAAT
CCGATCGTATAAAAAGCAATACCCTACACGACGCCGATATCTACTATTGGAATGCGGTAGCCCAGCACGAGCTGGTTTTC
GTGGCACAGGCATTTCGTACATCCATACAGCAACTGGTGGACGTCGTACGCCACCGGGTAGAAGTCGAATACATCGATCG
AAACGATCTTCTTATGGCGGAGGTAAAGCTAAACGATGCAGATTTCCAGTTATTGCAAACTCGTGATAACGCCGAGATCG
CACGTTTGGCCCTTAATTCTTTCGCTGGTGTAAACCCGAGCGATACCTTGCCGATCGATCATTCCGTAATCGCCCTCAAA
CAATTTATCCCTTTATCGGATGAGATAGATAACGCGATAACCAGCAGGCCGGAATACCGGATCGCCAAAAACAAGATCGA
GTTACAGGAATCATCCCGGAAAATAGCGGATGCCCATTTCTTACCCCAATTCCATATTGGAGTAGATGGAAGTTATTCCT
CACCGGGCTATAACTTCAAATCCGACCTAGATCCGAACTATGCGATCTACGCCAAGCTCAGTATCCCGCTCTTCGAATGG
GGAAAACGTAAGAGTACCCGCAACGCTTCCTCGTACGCCATCAATATGGCTCAACAGAATCTCAGCAAGACGCAAGATAA
GATCCGGCTGGAAATACAAACCGCCCATTACAACTATAAACAAGCTATCGATAAAGTCGAACTAACCGAGAGCTCATTAT
CAAAAGCATCCGAAAGTGAGCAAATGGCCATGGAGCGTTATAAGGAGGGGAATGTTTCCATCGTCGAGGTTATCAACGCT
CAATTATATCATCAGCAAGCTCAGGTTAATTATATACAATCCAAACTAAACGCACAGATGGCGAAGACGGATTTCGAACG
GGCAATTTATTATCTTCGCGAAAAAGAATAG

Upstream 100 bases:

>100_bases
CTTCGGACTCACCTTCGCCACCTTACTTACGTTATTCGTAACCCCGACGTTATACGCATTGTTTTACCGGATTCATTCAC
CTCACAAATAAACGATAAAA

Downstream 100 bases:

>100_bases
GTCATGAAAGAAATATCATACGGGAAATCGGCATGTATCCTTTTGTTTTCGGCATTAGGGGTCTTTTCCTATTTCTTGCT
GTTATATCATACGGAGCTAC

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; Type I Secretion Outer Membrane Protein; Acriflavin Resistance Protein; RND Efflux System Outer Membrane Lipoprotein; Outer Membrane Protein-Like

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL
SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF
VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK
QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW
GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA
QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE

Sequences:

>Translated_436_residues
MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL
SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF
VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK
QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW
GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA
QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE
>Mature_436_residues
MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARADFKPKLSAEGNFNYTGNPLEL
SIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANYQKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVF
VAQAFRTSIQQLVDVVRHRVEVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK
QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFKSDLDPNYAIYAKLSIPLFEW
GKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYKQAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINA
QLYHQQAQVNYIQSKLNAQMAKTDFERAIYYLREKE

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49734; Mature: 49734

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARAD
CCCEEEHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
FKPKLSAEGNFNYTGNPLELSIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANY
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCCCCCH
QKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVFVAQAFRTSIQQLVDVVRHRV
HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
EVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK
EEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFK
HHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
SDLDPNYAIYAKLSIPLFEWGKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYK
CCCCCCEEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH
QAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINAQLYHQQAQVNYIQSKLNAQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
AKTDFERAIYYLREKE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKVYIISGLLSFLSFPLIAQNSDYQAQYREKVLEYNQDLKAAGYNEAMKQEMIKSARAD
CCCEEEHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
FKPKLSAEGNFNYTGNPLELSIDLPSMNSPLYFQGKDLKYGATLSLSQPIYTGGGIRANY
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCCCCCH
QKARQEKELASNESDRIKSNTLHDADIYYWNAVAQHELVFVAQAFRTSIQQLVDVVRHRV
HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
EVEYIDRNDLLMAEVKLNDADFQLLQTRDNAEIARLALNSFAGVNPSDTLPIDHSVIALK
EEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QFIPLSDEIDNAITSRPEYRIAKNKIELQESSRKIADAHFLPQFHIGVDGSYSSPGYNFK
HHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
SDLDPNYAIYAKLSIPLFEWGKRKSTRNASSYAINMAQQNLSKTQDKIRLEIQTAHYNYK
CCCCCCEEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH
QAIDKVELTESSLSKASESEQMAMERYKEGNVSIVEVINAQLYHQQAQVNYIQSKLNAQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
AKTDFERAIYYLREKE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA