| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is yehU [H]
Identifier: 150007352
GI number: 150007352
Start: 831708
End: 832748
Strand: Reverse
Name: yehU [H]
Synonym: BDI_0703
Alternate gene names: 150007352
Gene position: 832748-831708 (Counterclockwise)
Preceding gene: 150007353
Following gene: 150007351
Centisome position: 17.31
GC content: 41.4
Gene sequence:
>1041_bases ATGAAAGAAATATCATACGGGAAATCGGCATGTATCCTTTTGTTTTCGGCATTAGGGGTCTTTTCCTATTTCTTGCTGTT ATATCATACGGAGCTACAAGAGCGCATCCCCGATATAAAGATCTCATTGATCGCTTTGTCCATCACGATAGCGGTATTCA ACTTGTTCGGTTTCAGTTTACTGGTCAGCAGCCATTGGATGGCTACCAACTATCCATTATATTATATCGATAAAAGCCGG ATGTTATGGCATTATCTGCTGGTAGCGATCCTATTGCTACTTATGAATTGTACCCTGTTTATCTCGTTGAAATGGATCAC AAGCATTGGCGATCCTTTCGTGATCCGGGCAAAAGGGGCCGGTTTGGTAATAGCCGTCTGGTTCGTGGAGATGATCATTT TCAGCCTTCTCTTGATTAATTATTCGATGCGTTATACATTGAATTTATATAAGGAGAAACAAAGATTGGAAGCAGAATCT ATACAAGCTAAATATACCGCTCTCCAAAGCCAGCTAAATCCTCATTTCCTATTCAATAGCTTGAATACATTGATAGCAGA GATAGAGTATGATCCGGCTACGGCAGTCAAGTTTACGCAGCATCTATCCGAGGTATACCGTTACGTGCTCCGCCAGCAAC AGTGCCAGATCGTCTCTTTAAAAGAGGAGCTTGATTTTCTGGATTCCTATATATTCCTCCATCAAGTCCGGCTGGGAGAT TGTTTGTCGTTGGAACGCGATCTTCCCGACAACGTCATTGACCATCAATTGCCCCCTCTGACACTGCAACTACTAGCCGA GAATGTCGTGAAACATAATTATATCGACGATTTTAACCCGATGACCATACGGGTATATACTGAAAGGAACAGTCGATATC TATGCGTCAGCAATACATTACGGCCTAAAAAAGTCTCAAACGCATCCGGTAAAGGATTAAAGAATTTGTCGGAGCGTTAT CAATTACTATGTAAGCAGGATATCCAGATCCGAAAAAATGATCACCAATTCACCGTATCAATCCCACTTATTTATGAATA A
Upstream 100 bases:
>100_bases GCAAGCTCAGGTTAATTATATACAATCCAAACTAAACGCACAGATGGCGAAGACGGATTTCGAACGGGCAATTTATTATC TTCGCGAAAAAGAATAGGTC
Downstream 100 bases:
>100_bases TATCCAAGTAGCCATTATCGAAGATGAGAAACCGGCCGCCCGGTTACTGGAAGGTATGATAAAGAAATTACGCCCGCAAT GGGATATCATCAAGATACCC
Product: putative two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKEISYGKSACILLFSALGVFSYFLLLYHTELQERIPDIKISLIALSITIAVFNLFGFSLLVSSHWMATNYPLYYIDKSR MLWHYLLVAILLLLMNCTLFISLKWITSIGDPFVIRAKGAGLVIAVWFVEMIIFSLLLINYSMRYTLNLYKEKQRLEAES IQAKYTALQSQLNPHFLFNSLNTLIAEIEYDPATAVKFTQHLSEVYRYVLRQQQCQIVSLKEELDFLDSYIFLHQVRLGD CLSLERDLPDNVIDHQLPPLTLQLLAENVVKHNYIDDFNPMTIRVYTERNSRYLCVSNTLRPKKVSNASGKGLKNLSERY QLLCKQDIQIRKNDHQFTVSIPLIYE
Sequences:
>Translated_346_residues MKEISYGKSACILLFSALGVFSYFLLLYHTELQERIPDIKISLIALSITIAVFNLFGFSLLVSSHWMATNYPLYYIDKSR MLWHYLLVAILLLLMNCTLFISLKWITSIGDPFVIRAKGAGLVIAVWFVEMIIFSLLLINYSMRYTLNLYKEKQRLEAES IQAKYTALQSQLNPHFLFNSLNTLIAEIEYDPATAVKFTQHLSEVYRYVLRQQQCQIVSLKEELDFLDSYIFLHQVRLGD CLSLERDLPDNVIDHQLPPLTLQLLAENVVKHNYIDDFNPMTIRVYTERNSRYLCVSNTLRPKKVSNASGKGLKNLSERY QLLCKQDIQIRKNDHQFTVSIPLIYE >Mature_346_residues MKEISYGKSACILLFSALGVFSYFLLLYHTELQERIPDIKISLIALSITIAVFNLFGFSLLVSSHWMATNYPLYYIDKSR MLWHYLLVAILLLLMNCTLFISLKWITSIGDPFVIRAKGAGLVIAVWFVEMIIFSLLLINYSMRYTLNLYKEKQRLEAES IQAKYTALQSQLNPHFLFNSLNTLIAEIEYDPATAVKFTQHLSEVYRYVLRQQQCQIVSLKEELDFLDSYIFLHQVRLGD CLSLERDLPDNVIDHQLPPLTLQLLAENVVKHNYIDDFNPMTIRVYTERNSRYLCVSNTLRPKKVSNASGKGLKNLSERY QLLCKQDIQIRKNDHQFTVSIPLIYE
Specific function: Unknown
COG id: COG3275
COG function: function code T; Putative regulator of cell autolysis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=179, Percent_Identity=30.7262569832402, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788723, Length=191, Percent_Identity=30.3664921465969, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 40247; Mature: 40247
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEISYGKSACILLFSALGVFSYFLLLYHTELQERIPDIKISLIALSITIAVFNLFGFSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH LVSSHWMATNYPLYYIDKSRMLWHYLLVAILLLLMNCTLFISLKWITSIGDPFVIRAKGA HHHCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCEEEEECCC GLVIAVWFVEMIIFSLLLINYSMRYTLNLYKEKQRLEAESIQAKYTALQSQLNPHFLFNS CEEHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNTLIAEIEYDPATAVKFTQHLSEVYRYVLRQQQCQIVSLKEELDFLDSYIFLHQVRLGD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CLSLERDLPDNVIDHQLPPLTLQLLAENVVKHNYIDDFNPMTIRVYTERNSRYLCVSNTL HHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEECCC RPKKVSNASGKGLKNLSERYQLLCKQDIQIRKNDHQFTVSIPLIYE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC >Mature Secondary Structure MKEISYGKSACILLFSALGVFSYFLLLYHTELQERIPDIKISLIALSITIAVFNLFGFSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH LVSSHWMATNYPLYYIDKSRMLWHYLLVAILLLLMNCTLFISLKWITSIGDPFVIRAKGA HHHCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCEEEEECCC GLVIAVWFVEMIIFSLLLINYSMRYTLNLYKEKQRLEAESIQAKYTALQSQLNPHFLFNS CEEHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNTLIAEIEYDPATAVKFTQHLSEVYRYVLRQQQCQIVSLKEELDFLDSYIFLHQVRLGD HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC CLSLERDLPDNVIDHQLPPLTLQLLAENVVKHNYIDDFNPMTIRVYTERNSRYLCVSNTL HHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEECCC RPKKVSNASGKGLKNLSERYQLLCKQDIQIRKNDHQFTVSIPLIYE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]