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The map label for this gene is rnfE [H]

Identifier: 150007167

GI number: 150007167

Start: 604964

End: 605548

Strand: Reverse

Name: rnfE [H]

Synonym: BDI_0512

Alternate gene names: 150007167

Gene position: 605548-604964 (Counterclockwise)

Preceding gene: 150007168

Following gene: 150007166

Centisome position: 12.59

GC content: 48.38

Gene sequence:

>585_bases
ATGAGTAATCTAAAAATATTGATGAATGGTATCATCACGGAGAACCCGACATTTGTATTACTGTTAGGTATGTGTCCTAC
CTTGGGAACGACCTCTTCGGCCATCAACGGCATGAGTATGGGATTGGCTACGATGTTCGTATTGATTTGCTCGAATATCG
TGATTTCCGCCTTGAAAAACGTAATCCCCGACTTGGTGCGTATCCCGGGATATATCGTTGTGATCGCGACGTTCGTGACC
GTAGTGCAGATGTGCATGGAAGCGTTCGTCCCGGCTTTATACGCTAGCTTGGGATTATTTATCCCGTTGATCGTGGTAAA
CTGTATCGTACTAGGACGTGCCGAGGCTTTCGCTGCGAAGAACGGCGTAGTCCCATCCGCTTTCGACGGAATCGGTATCG
GACTGGGCTTTACGATGGCTCTTACGCTGCTGGGCGCTTGCCGTGAGTTCTTGGGAACCGGTAAGTTATTCAACGTAACC
TTGATGCCCGAGGAATATGGTTCGCTGATCTTCGTATTGGCTCCGGGAGCGTTTATCGCCTTGGGTTATCTGGTAGCAAT
AGTAAACAAACTGCGTAAAGCATAA

Upstream 100 bases:

>100_bases
TCCTCGATGCCGTGAACCGTGCGTATAGCGCATTCGCTGGCGTAGACGGACTAACGGGTGCCACTTCAACTGATAACAAA
TAAAAAGGGAGGACAGAACA

Downstream 100 bases:

>100_bases
TAAACGGATCATATGGAATATATATTGATATTTATCGCCGCCGTATTCGTTAATAACGTTGTACTGGCACAGTTCTTGGG
AATTTGTCCGTTCTTGGGGG

Product: electron transport complex RsxE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSNLKILMNGIITENPTFVLLLGMCPTLGTTSSAINGMSMGLATMFVLICSNIVISALKNVIPDLVRIPGYIVVIATFVT
VVQMCMEAFVPALYASLGLFIPLIVVNCIVLGRAEAFAAKNGVVPSAFDGIGIGLGFTMALTLLGACREFLGTGKLFNVT
LMPEEYGSLIFVLAPGAFIALGYLVAIVNKLRKA

Sequences:

>Translated_194_residues
MSNLKILMNGIITENPTFVLLLGMCPTLGTTSSAINGMSMGLATMFVLICSNIVISALKNVIPDLVRIPGYIVVIATFVT
VVQMCMEAFVPALYASLGLFIPLIVVNCIVLGRAEAFAAKNGVVPSAFDGIGIGLGFTMALTLLGACREFLGTGKLFNVT
LMPEEYGSLIFVLAPGAFIALGYLVAIVNKLRKA
>Mature_193_residues
SNLKILMNGIITENPTFVLLLGMCPTLGTTSSAINGMSMGLATMFVLICSNIVISALKNVIPDLVRIPGYIVVIATFVTV
VQMCMEAFVPALYASLGLFIPLIVVNCIVLGRAEAFAAKNGVVPSAFDGIGIGLGFTMALTLLGACREFLGTGKLFNVTL
MPEEYGSLIFVLAPGAFIALGYLVAIVNKLRKA

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4660

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787919, Length=212, Percent_Identity=43.8679245283019, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787914, Length=164, Percent_Identity=33.5365853658537, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR010968 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 20426; Mature: 20295

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLKILMNGIITENPTFVLLLGMCPTLGTTSSAINGMSMGLATMFVLICSNIVISALKN
CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPDLVRIPGYIVVIATFVTVVQMCMEAFVPALYASLGLFIPLIVVNCIVLGRAEAFAAK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGVVPSAFDGIGIGLGFTMALTLLGACREFLGTGKLFNVTLMPEEYGSLIFVLAPGAFIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCEEEEECCHHHHH
LGYLVAIVNKLRKA
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SNLKILMNGIITENPTFVLLLGMCPTLGTTSSAINGMSMGLATMFVLICSNIVISALKN
CCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPDLVRIPGYIVVIATFVTVVQMCMEAFVPALYASLGLFIPLIVVNCIVLGRAEAFAAK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGVVPSAFDGIGIGLGFTMALTLLGACREFLGTGKLFNVTLMPEEYGSLIFVLAPGAFIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCEEEEECCHHHHH
LGYLVAIVNKLRKA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA