| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is aga [H]
Identifier: 150007104
GI number: 150007104
Start: 513242
End: 515449
Strand: Reverse
Name: aga [H]
Synonym: BDI_0447
Alternate gene names: 150007104
Gene position: 515449-513242 (Counterclockwise)
Preceding gene: 150007109
Following gene: 150007076
Centisome position: 10.71
GC content: 47.64
Gene sequence:
>2208_bases ATGAACATTAAGAGTAAATTCGGTTATTTATGTTGCGCCTCCCTATTGACCACTAGTTTATGGGCACAAGACGTATTGAT TTCCACGAGGAATACCTCATTATTGCTAGACGCACCTGTCGGCGGAGAGGTAAGATTCATCTACTATGGAGACAAGTTAT CCACTTCCGACGCGGCTACCTTGCTCGAGACCGAGCAGAAAACATTTTCCGCTTATCCGGTCTACGGCTTGAATTGCCCC TCCGAAAGCGCATTGTCCGTTACCCATGGCGACGGGAATATGACCCTTCAACTGGAAGTCATAAAAGTAGATACACGAAA AGAGCAAACGGCAGATATCACAACGATCCGATTAAAAGATAAAGTGTATCCTTTTTATATGAATCTCTGTTACAGAACCT ATCCGGACGCTGATATCATCGAGACTTGGACAGAGATCACGCATGAGGAGAAAAAAGCGATCACCCTCAATCGTTTCGCT TCCGCTTATCTGCCGATCCGGAAAGGAGACGTATGGGTTTCCCACTTATACGGCTCATGGGCAAACGAGGCTCAATTGGC ACAAGAACCGTTACGACCGGGCATCAAGATGATAAAAAACAAGGATGGTATCCGCAACTCCCATACCGCCCACGCCGAAG TGATGATCTCCCTAGACGGAAAACCAAAGGAAAACACCGGTTCCGTTATTGGCGCCGCCCTATGCTATAGCGGTAACTAC AAATTATTCTTCGATACGGATGATAGCGACTATCACCATTTCTTTGCGGGAATAAACGAGGAGAACTCGGCTTACACCCT CAAAGCCAAAGAAAGTTTCCGTACACCGGAATTGGCGCTGACTTACAGTAAGGACGGCTTAAGCGGAAGCAGCCGAAATT TCCACGCATGGGCACGCAAACATAAGATAGCGAATGGAGCGACCGCACGGAAAATCTTACTAAACAGTTGGGAAGGTGTA TATTTCGATATCAATCAAGAAGGTATGGACCAAATGATGAGTGATATCCAGTCTATGGGCGGCGAGTTGTTCGTCATGGA CGACGGCTGGTTTGGCGATAAATATCCTCGTAATAAAGATAACTCGTCCTTAGGGGATTGGATGGTTGATGCCCGAAAAC TACCAAGAGGCATCGAGGGCCTGATCGCCGACGCCAACAAGCATGGTATTAAATTCGGTATCTGGATCGAGCCGGAAATG GCCAACACGACAAGTGAATTGTACGAGAAGCATCCGGAATGGGTATTGAAAGCTCCAAACAGGGAAATTGTCCTGGGGCG TGGCGGTACACAGGTCGTTCTTGATCTCTCCAATCCCGAGGTGCAAGACTTCATATTCGGTATCGTCGACAACTTGATGA CAACATACCCGGAGATCGATTATATCAAATGGGACGCCAATATGAGCATCCTGAACCATGGCTCCCAATACCTGCCTTCG GATCAGCAAAGCCATATGTATATCGAATATCACGGAGGATTCAAGAAAGTCTGTGAGCGTATCCGAGCCAAATACCCGGA TTTAACCCTACAGGCTTGCGCCAGCGGTGGAGGCCGGGCAAATTACGGTGTCATGCCTTACTTCGATGAGTTTTGGGTAA GCGACAATACCGATGCCTTACAGCGTATCTATATGCAATGGGGTACTTCTTATTTTTTCCCGGCTATCGCCATGGCCTCA CATATCAGCGCCGCCCCCAACCATCAAACATTCCGGGTCATTCCCCTGAAATATCGGATCGACGTAGCGATGAGCGGCCG TTTGGGCATGGAGATCCAACCCAAGAATATGACAGAAGAAGAGAAAACACTTTGCCGCAAGGCGATCGCCGATTATAAGA CGATCCGTCCCGTCGTGCAATTCGGCGATATCTACCGTCTGGTTTCTCCGTACGATCGTTTGGGAGTAGCTTCCTTGATG TACACCTCACCGGAGAAAGACAAAGCCGTATTTTATTGGTGGAAGACCGAGCATTTCGTCAACCAACATTTACCCCGTGT AAAGATGAACGGATTATCCCCAGACAAGAAATACAGAGTCTGCGAACTGAACCGGATCGACAACGAGCCTCTGGCTTTCG AGGGTAAAGCTTTCACCGGGGAATATCTCATGGCGAACGGACTAGAAATCCCTTATAATCACATTGTCGATTATCACAAG CAGAATGATTACTCGAGCCGAGTGCTTTATTTGGAGGAAGTTAAATGA
Upstream 100 bases:
>100_bases AAAGCAGAAAAGTAACAGTATCTGATAAAATCCTATTAGGAAACCTACCGGCTCTCTCCTACTTTTGCCCCTGAATTTAA ATCTAACACCTACTAATAAA
Downstream 100 bases:
>100_bases TGAATAAATCATTCTCCTTCCAAAGCGATCAATAAAGCGATCACCTCCGAATAATTAGCGGTTCCAGTAGGTATCTTATT GCCTTTCAGGAAAAGATTAT
Product: alpha-glycosidase
Products: NA
Alternate protein names: Melibiase [H]
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MNIKSKFGYLCCASLLTTSLWAQDVLISTRNTSLLLDAPVGGEVRFIYYGDKLSTSDAATLLETEQKTFSAYPVYGLNCP SESALSVTHGDGNMTLQLEVIKVDTRKEQTADITTIRLKDKVYPFYMNLCYRTYPDADIIETWTEITHEEKKAITLNRFA SAYLPIRKGDVWVSHLYGSWANEAQLAQEPLRPGIKMIKNKDGIRNSHTAHAEVMISLDGKPKENTGSVIGAALCYSGNY KLFFDTDDSDYHHFFAGINEENSAYTLKAKESFRTPELALTYSKDGLSGSSRNFHAWARKHKIANGATARKILLNSWEGV YFDINQEGMDQMMSDIQSMGGELFVMDDGWFGDKYPRNKDNSSLGDWMVDARKLPRGIEGLIADANKHGIKFGIWIEPEM ANTTSELYEKHPEWVLKAPNREIVLGRGGTQVVLDLSNPEVQDFIFGIVDNLMTTYPEIDYIKWDANMSILNHGSQYLPS DQQSHMYIEYHGGFKKVCERIRAKYPDLTLQACASGGGRANYGVMPYFDEFWVSDNTDALQRIYMQWGTSYFFPAIAMAS HISAAPNHQTFRVIPLKYRIDVAMSGRLGMEIQPKNMTEEEKTLCRKAIADYKTIRPVVQFGDIYRLVSPYDRLGVASLM YTSPEKDKAVFYWWKTEHFVNQHLPRVKMNGLSPDKKYRVCELNRIDNEPLAFEGKAFTGEYLMANGLEIPYNHIVDYHK QNDYSSRVLYLEEVK
Sequences:
>Translated_735_residues MNIKSKFGYLCCASLLTTSLWAQDVLISTRNTSLLLDAPVGGEVRFIYYGDKLSTSDAATLLETEQKTFSAYPVYGLNCP SESALSVTHGDGNMTLQLEVIKVDTRKEQTADITTIRLKDKVYPFYMNLCYRTYPDADIIETWTEITHEEKKAITLNRFA SAYLPIRKGDVWVSHLYGSWANEAQLAQEPLRPGIKMIKNKDGIRNSHTAHAEVMISLDGKPKENTGSVIGAALCYSGNY KLFFDTDDSDYHHFFAGINEENSAYTLKAKESFRTPELALTYSKDGLSGSSRNFHAWARKHKIANGATARKILLNSWEGV YFDINQEGMDQMMSDIQSMGGELFVMDDGWFGDKYPRNKDNSSLGDWMVDARKLPRGIEGLIADANKHGIKFGIWIEPEM ANTTSELYEKHPEWVLKAPNREIVLGRGGTQVVLDLSNPEVQDFIFGIVDNLMTTYPEIDYIKWDANMSILNHGSQYLPS DQQSHMYIEYHGGFKKVCERIRAKYPDLTLQACASGGGRANYGVMPYFDEFWVSDNTDALQRIYMQWGTSYFFPAIAMAS HISAAPNHQTFRVIPLKYRIDVAMSGRLGMEIQPKNMTEEEKTLCRKAIADYKTIRPVVQFGDIYRLVSPYDRLGVASLM YTSPEKDKAVFYWWKTEHFVNQHLPRVKMNGLSPDKKYRVCELNRIDNEPLAFEGKAFTGEYLMANGLEIPYNHIVDYHK QNDYSSRVLYLEEVK >Mature_735_residues MNIKSKFGYLCCASLLTTSLWAQDVLISTRNTSLLLDAPVGGEVRFIYYGDKLSTSDAATLLETEQKTFSAYPVYGLNCP SESALSVTHGDGNMTLQLEVIKVDTRKEQTADITTIRLKDKVYPFYMNLCYRTYPDADIIETWTEITHEEKKAITLNRFA SAYLPIRKGDVWVSHLYGSWANEAQLAQEPLRPGIKMIKNKDGIRNSHTAHAEVMISLDGKPKENTGSVIGAALCYSGNY KLFFDTDDSDYHHFFAGINEENSAYTLKAKESFRTPELALTYSKDGLSGSSRNFHAWARKHKIANGATARKILLNSWEGV YFDINQEGMDQMMSDIQSMGGELFVMDDGWFGDKYPRNKDNSSLGDWMVDARKLPRGIEGLIADANKHGIKFGIWIEPEM ANTTSELYEKHPEWVLKAPNREIVLGRGGTQVVLDLSNPEVQDFIFGIVDNLMTTYPEIDYIKWDANMSILNHGSQYLPS DQQSHMYIEYHGGFKKVCERIRAKYPDLTLQACASGGGRANYGVMPYFDEFWVSDNTDALQRIYMQWGTSYFFPAIAMAS HISAAPNHQTFRVIPLKYRIDVAMSGRLGMEIQPKNMTEEEKTLCRKAIADYKTIRPVVQFGDIYRLVSPYDRLGVASLM YTSPEKDKAVFYWWKTEHFVNQHLPRVKMNGLSPDKKYRVCELNRIDNEPLAFEGKAFTGEYLMANGLEIPYNHIVDYHK QNDYSSRVLYLEEVK
Specific function: Unknown
COG id: COG3345
COG function: function code G; Alpha-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 36 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002252 - InterPro: IPR017853 - InterPro: IPR000111 [H]
Pfam domain/function: PF02065 Melibiase [H]
EC number: =3.2.1.22 [H]
Molecular weight: Translated: 83686; Mature: 83686
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKSKFGYLCCASLLTTSLWAQDVLISTRNTSLLLDAPVGGEVRFIYYGDKLSTSDAAT CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHH LLETEQKTFSAYPVYGLNCPSESALSVTHGDGNMTLQLEVIKVDTRKEQTADITTIRLKD HHHHHHHHEEECCEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEC KVYPFYMNLCYRTYPDADIIETWTEITHEEKKAITLNRFASAYLPIRKGDVWVSHLYGSW CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCEEECCCEEEEEHHCCC ANEAQLAQEPLRPGIKMIKNKDGIRNSHTAHAEVMISLDGKPKENTGSVIGAALCYSGNY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCE KLFFDTDDSDYHHFFAGINEENSAYTLKAKESFRTPELALTYSKDGLSGSSRNFHAWARK EEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHH HKIANGATARKILLNSWEGVYFDINQEGMDQMMSDIQSMGGELFVMDDGWFGDKYPRNKD HHCCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC NSSLGDWMVDARKLPRGIEGLIADANKHGIKFGIWIEPEMANTTSELYEKHPEWVLKAPN CCCHHHHHHHHHHCCCCHHHHEECCCCCCEEEEEEECCHHCCCHHHHHHCCCCEEEECCC REIVLGRGGTQVVLDLSNPEVQDFIFGIVDNLMTTYPEIDYIKWDANMSILNHGSQYLPS CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCC DQQSHMYIEYHGGFKKVCERIRAKYPDLTLQACASGGGRANYGVMPYFDEFWVSDNTDAL CCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHH QRIYMQWGTSYFFPAIAMASHISAAPNHQTFRVIPLKYRIDVAMSGRLGMEIQPKNMTEE HHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCEECCCCCCHH EKTLCRKAIADYKTIRPVVQFGDIYRLVSPYDRLGVASLMYTSPEKDKAVFYWWKTEHFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHEECCCCCCCEEEEEECCHHHH NQHLPRVKMNGLSPDKKYRVCELNRIDNEPLAFEGKAFTGEYLMANGLEIPYNHIVDYHK HHCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEECCCCCCHHHHHHHHC QNDYSSRVLYLEEVK CCCCCCEEEEEEECC >Mature Secondary Structure MNIKSKFGYLCCASLLTTSLWAQDVLISTRNTSLLLDAPVGGEVRFIYYGDKLSTSDAAT CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHH LLETEQKTFSAYPVYGLNCPSESALSVTHGDGNMTLQLEVIKVDTRKEQTADITTIRLKD HHHHHHHHEEECCEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEC KVYPFYMNLCYRTYPDADIIETWTEITHEEKKAITLNRFASAYLPIRKGDVWVSHLYGSW CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHCCEEECCCEEEEEHHCCC ANEAQLAQEPLRPGIKMIKNKDGIRNSHTAHAEVMISLDGKPKENTGSVIGAALCYSGNY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCE KLFFDTDDSDYHHFFAGINEENSAYTLKAKESFRTPELALTYSKDGLSGSSRNFHAWARK EEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHH HKIANGATARKILLNSWEGVYFDINQEGMDQMMSDIQSMGGELFVMDDGWFGDKYPRNKD HHCCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC NSSLGDWMVDARKLPRGIEGLIADANKHGIKFGIWIEPEMANTTSELYEKHPEWVLKAPN CCCHHHHHHHHHHCCCCHHHHEECCCCCCEEEEEEECCHHCCCHHHHHHCCCCEEEECCC REIVLGRGGTQVVLDLSNPEVQDFIFGIVDNLMTTYPEIDYIKWDANMSILNHGSQYLPS CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCC DQQSHMYIEYHGGFKKVCERIRAKYPDLTLQACASGGGRANYGVMPYFDEFWVSDNTDAL CCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHH QRIYMQWGTSYFFPAIAMASHISAAPNHQTFRVIPLKYRIDVAMSGRLGMEIQPKNMTEE HHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCEECCCCCCHH EKTLCRKAIADYKTIRPVVQFGDIYRLVSPYDRLGVASLMYTSPEKDKAVFYWWKTEHFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHEECCCCCCCEEEEEECCHHHH NQHLPRVKMNGLSPDKKYRVCELNRIDNEPLAFEGKAFTGEYLMANGLEIPYNHIVDYHK HHCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEECCCCCCHHHHHHHHC QNDYSSRVLYLEEVK CCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1649890; 1660918; 12397186 [H]