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The map label for this gene is atpF

Identifier: 150006930

GI number: 150006930

Start: 294169

End: 294669

Strand: Reverse

Name: atpF

Synonym: BDI_0266

Alternate gene names: 150006930

Gene position: 294669-294169 (Counterclockwise)

Preceding gene: 150006931

Following gene: 150006929

Centisome position: 6.12

GC content: 49.7

Gene sequence:

>501_bases
ATGTCTTTATTAACACCGGATTCAGGGCTTCTATTCTGGATGATCGTTTCATTCGGGATTGTCTTCGTGATCCTTTCCAA
ATACGGTTTTCCCGTGATCGTCAAGGCAATCGAACAACGGAAAGCTTACATTGACAATTCCTTAGAGACGGCACGTCAGG
CGAATGAGCGACTTGCCCATATCCAAGCCGAGGGCGAGAAGATGCTAGCCGAGGCCAAGGAAAAGCAAAACGCCGTCCTG
AAGGAAGCCTTTGCCGAAAAGGAGCGGATCATCGAGGAGGCACGGAAAAAGGCCGTCTCCGAGGCACATCTGCAGATAGA
GGAGGCTACCCGGCGTATCCGCGAAGAAAAAGAGAAAGCTATTCGCGAAGTCCGCTCGGAGATAGCGGATCTGTCTATCG
CTATCGCAGAGAAAGTAATGAAAGAGAAAATCGGCCGGGATAAGGAACAACAACAGATGATCGACCGGCTGCTGGATGAG
GTATCGTTTAGTAAATCGTAA

Upstream 100 bases:

>100_bases
GTACCTCGATGTTGATTATGGGAGCGTTGGTAGAAGGTGTGGCATTGTTCGCTATTGTCGTATGTTTCTTAGCGTTGTTC
CAATAAAAAAGTAACAAACT

Downstream 100 bases:

>100_bases
GGTATGGATATAGGAACTATTTCTTCCCGGTATGCCAAAGCGCTTTTCTCCCTAGCGAAAGACAAGGAACAGGAAAGCCG
GGTATATGATGATATGAAGA

Product: ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSLLTPDSGLLFWMIVSFGIVFVILSKYGFPVIVKAIEQRKAYIDNSLETARQANERLAHIQAEGEKMLAEAKEKQNAVL
KEAFAEKERIIEEARKKAVSEAHLQIEEATRRIREEKEKAIREVRSEIADLSIAIAEKVMKEKIGRDKEQQQMIDRLLDE
VSFSKS

Sequences:

>Translated_166_residues
MSLLTPDSGLLFWMIVSFGIVFVILSKYGFPVIVKAIEQRKAYIDNSLETARQANERLAHIQAEGEKMLAEAKEKQNAVL
KEAFAEKERIIEEARKKAVSEAHLQIEEATRRIREEKEKAIREVRSEIADLSIAIAEKVMKEKIGRDKEQQQMIDRLLDE
VSFSKS
>Mature_165_residues
SLLTPDSGLLFWMIVSFGIVFVILSKYGFPVIVKAIEQRKAYIDNSLETARQANERLAHIQAEGEKMLAEAKEKQNAVLK
EAFAEKERIIEEARKKAVSEAHLQIEEATRRIREEKEKAIREVRSEIADLSIAIAEKVMKEKIGRDKEQQQMIDRLLDEV
SFSKS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PARD8 (A6L8N7)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001301673.1
- STRING:   A6L8N7
- GeneID:   5305421
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_0266
- eggNOG:   NOG148300
- HOGENOM:   HBG617328
- OMA:   LEEYKQQ
- ProtClustDB:   CLSK822337
- BioCyc:   PDIS435591:BDI_0266-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19031; Mature: 18900

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1fb31b9c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLTPDSGLLFWMIVSFGIVFVILSKYGFPVIVKAIEQRKAYIDNSLETARQANERLAH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQAEGEKMLAEAKEKQNAVLKEAFAEKERIIEEARKKAVSEAHLQIEEATRRIREEKEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IREVRSEIADLSIAIAEKVMKEKIGRDKEQQQMIDRLLDEVSFSKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
SLLTPDSGLLFWMIVSFGIVFVILSKYGFPVIVKAIEQRKAYIDNSLETARQANERLAH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQAEGEKMLAEAKEKQNAVLKEAFAEKERIIEEARKKAVSEAHLQIEEATRRIREEKEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IREVRSEIADLSIAIAEKVMKEKIGRDKEQQQMIDRLLDEVSFSKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA