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The map label for this gene is atpH

Identifier: 150006929

GI number: 150006929

Start: 293623

End: 294165

Strand: Reverse

Name: atpH

Synonym: BDI_0265

Alternate gene names: 150006929

Gene position: 294165-293623 (Counterclockwise)

Preceding gene: 150006930

Following gene: 150006928

Centisome position: 6.11

GC content: 50.83

Gene sequence:

>543_bases
ATGGATATAGGAACTATTTCTTCCCGGTATGCCAAAGCGCTTTTCTCCCTAGCGAAAGACAAGGAACAGGAAAGCCGGGT
ATATGATGATATGAAGATGTTGGCGGACAGCTTCTCGATGGAGCCAGAGCTTAGGGGTGCCTTGAGCAACCCGATCGTTT
CCGTACCGGAGAAAGTGAAATTGCTTACGGCGGCGGGAGGTATCGAGGTATGCGAGCTATATTCACGTTTTATCAATCTG
GTATTAGCCCATAAACGGGAGACACTACTGCCCTTCATTGCATACATTTATATCCATTTGTACCGGAAAGAGAAGAAGAT
TACCCGGGTACGATTCGACACGGCCGTAGCGGTAGACGATGCGGTCAAGTCTCACCTGCAAGACAAGCTGCGGAAAGAGA
CGGGATGCACAATCGAGTTCTCCGGCCACGTGGAACCGGAACTAATCGGGGGCTTCCGCCTACGCATCGGCAATTACCGG
ATAGACGCCAGCTATGCGACGCAACTACGGGATATCCGTACCGGGCTACTCGAAAACAGATAA

Upstream 100 bases:

>100_bases
CGCAGAGAAAGTAATGAAAGAGAAAATCGGCCGGGATAAGGAACAACAACAGATGATCGACCGGCTGCTGGATGAGGTAT
CGTTTAGTAAATCGTAAGGT

Downstream 100 bases:

>100_bases
AAAAGAAGAAGTATGACAGAACAGATAAAAGTGAGTGAAGTCTCCTCCATCCTGCGCCAGCAATTGGAAGGAATCCATAC
CAGCATCAAGCTGGAAGAGG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDIGTISSRYAKALFSLAKDKEQESRVYDDMKMLADSFSMEPELRGALSNPIVSVPEKVKLLTAAGGIEVCELYSRFINL
VLAHKRETLLPFIAYIYIHLYRKEKKITRVRFDTAVAVDDAVKSHLQDKLRKETGCTIEFSGHVEPELIGGFRLRIGNYR
IDASYATQLRDIRTGLLENR

Sequences:

>Translated_180_residues
MDIGTISSRYAKALFSLAKDKEQESRVYDDMKMLADSFSMEPELRGALSNPIVSVPEKVKLLTAAGGIEVCELYSRFINL
VLAHKRETLLPFIAYIYIHLYRKEKKITRVRFDTAVAVDDAVKSHLQDKLRKETGCTIEFSGHVEPELIGGFRLRIGNYR
IDASYATQLRDIRTGLLENR
>Mature_180_residues
MDIGTISSRYAKALFSLAKDKEQESRVYDDMKMLADSFSMEPELRGALSNPIVSVPEKVKLLTAAGGIEVCELYSRFINL
VLAHKRETLLPFIAYIYIHLYRKEKKITRVRFDTAVAVDDAVKSHLQDKLRKETGCTIEFSGHVEPELIGGFRLRIGNYR
IDASYATQLRDIRTGLLENR

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PARD8 (A6L8N6)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001301672.1
- ProteinModelPortal:   A6L8N6
- SMR:   A6L8N6
- STRING:   A6L8N6
- GeneID:   5305420
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_0265
- eggNOG:   COG0712
- HOGENOM:   HBG346752
- OMA:   KRVKQQF
- ProtClustDB:   PRK13429
- BioCyc:   PDIS435591:BDI_0265-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20501; Mature: 20501

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGTISSRYAKALFSLAKDKEQESRVYDDMKMLADSFSMEPELRGALSNPIVSVPEKVK
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHH
LLTAAGGIEVCELYSRFINLVLAHKRETLLPFIAYIYIHLYRKEKKITRVRFDTAVAVDD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKSHLQDKLRKETGCTIEFSGHVEPELIGGFRLRIGNYRIDASYATQLRDIRTGLLENR
HHHHHHHHHHHHHHCCEEEECCCCCHHHHCCEEEEECCEEECHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIGTISSRYAKALFSLAKDKEQESRVYDDMKMLADSFSMEPELRGALSNPIVSVPEKVK
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHH
LLTAAGGIEVCELYSRFINLVLAHKRETLLPFIAYIYIHLYRKEKKITRVRFDTAVAVDD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKSHLQDKLRKETGCTIEFSGHVEPELIGGFRLRIGNYRIDASYATQLRDIRTGLLENR
HHHHHHHHHHHHHHCCEEEECCCCCHHHHCCEEEEECCEEECHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA