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The map label for this gene is (hspc4-1 [H]

Identifier: 150006775

GI number: 150006775

Start: 111370

End: 111798

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: BDI_0101

Alternate gene names: 150006775

Gene position: 111798-111370 (Counterclockwise)

Preceding gene: 150006781

Following gene: 150006774

Centisome position: 2.32

GC content: 41.03

Gene sequence:

>429_bases
ATGACACCGATGAGAAGAAGTCAAAATTGGTTACCGTATGTATTCAATGATTTATTTGACAACGACTGGATGATAAAAGC
AAACTCTACAGCTCCAGCCATCAACGTGATAGAATCCGATAAGGATTATCGAGTTGAGGTAGCCGCTCCCGGTATGACGA
AGAACGATTTCAACATCAAGATCGATGAGAACAACAACTTGGTCGTATCTATGGAGAAAAAAGAAGAAAAGAATGAGGAT
AAGAAAGACGGACGCTATCTGAGACGCGAATTCTCTTATAGCAAGTTCCAACAAACCATGGTTTTGCCTGACAATGTAGA
GAAAGACAAGATTGAGGCGAAGGTTGAGAACGGCGTCTTGAGTATCAGCATACCGAAAAGAACTGAGGAAGAGGCTAAAA
TGGCCGAGAAAGTAATCGAGATCAAATAA

Upstream 100 bases:

>100_bases
GCCATTTGAAGTATCTATAGCGAATTCGAGATTAAAAAGGACGAGTTCAGAAATAAGAATAGTAAATAGAATGTTTAACT
AATAATTGGAGGACTGTATT

Downstream 100 bases:

>100_bases
CCTCGATACACTTTCCTTCGTAAAAACTCAACAAAACCGATAATGGCTTGTTCTATTTATAAACAACATAAAATAGAATA
AGCCATTATGATTTTAAACA

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTPMRRSQNWLPYVFNDLFDNDWMIKANSTAPAINVIESDKDYRVEVAAPGMTKNDFNIKIDENNNLVVSMEKKEEKNED
KKDGRYLRREFSYSKFQQTMVLPDNVEKDKIEAKVENGVLSISIPKRTEEEAKMAEKVIEIK

Sequences:

>Translated_142_residues
MTPMRRSQNWLPYVFNDLFDNDWMIKANSTAPAINVIESDKDYRVEVAAPGMTKNDFNIKIDENNNLVVSMEKKEEKNED
KKDGRYLRREFSYSKFQQTMVLPDNVEKDKIEAKVENGVLSISIPKRTEEEAKMAEKVIEIK
>Mature_141_residues
TPMRRSQNWLPYVFNDLFDNDWMIKANSTAPAINVIESDKDYRVEVAAPGMTKNDFNIKIDENNNLVVSMEKKEEKNEDK
KDGRYLRREFSYSKFQQTMVLPDNVEKDKIEAKVENGVLSISIPKRTEEEAKMAEKVIEIK

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319546, Length=139, Percent_Identity=32.3741007194245, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16595; Mature: 16464

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPMRRSQNWLPYVFNDLFDNDWMIKANSTAPAINVIESDKDYRVEVAAPGMTKNDFNIK
CCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCEEE
IDENNNLVVSMEKKEEKNEDKKDGRYLRREFSYSKFQQTMVLPDNVEKDKIEAKVENGVL
EECCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHEEEECCCCCCCHHHHEEECCCEE
SISIPKRTEEEAKMAEKVIEIK
EEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TPMRRSQNWLPYVFNDLFDNDWMIKANSTAPAINVIESDKDYRVEVAAPGMTKNDFNIK
CCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCEEE
IDENNNLVVSMEKKEEKNEDKKDGRYLRREFSYSKFQQTMVLPDNVEKDKIEAKVENGVL
EECCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHEEEECCCCCCCHHHHEEECCCEE
SISIPKRTEEEAKMAEKVIEIK
EEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA