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The map label for this gene is ytxE [H]

Identifier: 150006781

GI number: 150006781

Start: 115740

End: 116573

Strand: Reverse

Name: ytxE [H]

Synonym: BDI_0107

Alternate gene names: 150006781

Gene position: 116573-115740 (Counterclockwise)

Preceding gene: 150006790

Following gene: 150006775

Centisome position: 2.42

GC content: 48.68

Gene sequence:

>834_bases
ATGAAAAGATTGTTATTTATCTCGGTCTCCGCACTCCTTTTATGTTCTTCGTGCGTGAGTAAAAAGAAATACCTCCTTGC
CGAGAACGGCCGGTTGGAGGCGATCGGACGTGGCGACGCCTTGAAGGAGGAATTGATTAAATGCAAGGACGATAACGACG
CGCTCAACAACCGGATCGCCGCCTTGATAAGGGATACGACCACAATGGGGCGTGATATCCGTAATTACCAGACCATGTTG
AATACCAATATGGGTGAGCAGGACAAGCTGAATGCCTTGTTACAGCAAAAGATGAGTGAGCTGGACGAGCGTGAGCGTAC
CATCAACGAGCTACAGGATATGATGAACGCACAGAACGCAAAGGTACAGAATTTGTTGAGTAGCGTGAAAGACGCTTTGC
TGGGTTTCAACAGTGATGAGCTGACCGTAACCGAGAAGAATGGTAAAGTATATGTAGCCATGTCAGATAAGCTTCTGTTC
CAATCGGGTAGCGCAAAGGTCGATAAACGAGGCAAGGAAGCGTTGGCTAAGTTGGCCGAGGTGTTGAATAAGCAAAACGA
TATAGACGTTTATATAGAGGGCCATACGGACAGCAAGCCGATCAATACCGCCCAATTCAAGGATAATTGGGATCTAAGCG
TGATCCGTGCGACCTCCGTAGTGCGTATCCTTACCAAGGATTACGGGGTGAATCCGCTACAGATACAACCTTGTGGTCGT
GGGGAGTTTATGCCGGTCGCTGATAACGAGACCGCCGATGGACGTAGCAAGAACCGCCGTACGGAGATCATCATGGCTCC
GAAGTTGGATAAGTTGATGCAGATGTTGCAGTGA

Upstream 100 bases:

>100_bases
CCGCTGATTCTTTAATATTGGTTTATGAGACACAAATATCCTAAACTTGCGTGTAGGAAATTGTAATAAATATTACATTG
CACGAAATTTTATGCGTAAA

Downstream 100 bases:

>100_bases
TAATGTATTGTCAAGCTCCGGGTATTATCTACTGCCGGAGCTTGGCTAAAAACATTCCGTTCACTCTTCTAAATGATATA
CAACACATCGATACCTCAAT

Product: putative flagellar motor protein MotB

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKRLLFISVSALLLCSSCVSKKKYLLAENGRLEAIGRGDALKEELIKCKDDNDALNNRIAALIRDTTTMGRDIRNYQTML
NTNMGEQDKLNALLQQKMSELDERERTINELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKLLF
QSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGR
GEFMPVADNETADGRSKNRRTEIIMAPKLDKLMQMLQ

Sequences:

>Translated_277_residues
MKRLLFISVSALLLCSSCVSKKKYLLAENGRLEAIGRGDALKEELIKCKDDNDALNNRIAALIRDTTTMGRDIRNYQTML
NTNMGEQDKLNALLQQKMSELDERERTINELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKLLF
QSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGR
GEFMPVADNETADGRSKNRRTEIIMAPKLDKLMQMLQ
>Mature_277_residues
MKRLLFISVSALLLCSSCVSKKKYLLAENGRLEAIGRGDALKEELIKCKDDNDALNNRIAALIRDTTTMGRDIRNYQTML
NTNMGEQDKLNALLQQKMSELDERERTINELQDMMNAQNAKVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKLLF
QSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGR
GEFMPVADNETADGRSKNRRTEIIMAPKLDKLMQMLQ

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=127, Percent_Identity=33.8582677165354, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31118; Mature: 31118

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLFISVSALLLCSSCVSKKKYLLAENGRLEAIGRGDALKEELIKCKDDNDALNNRIA
CCEEEEEHHHHHHHHHHHHHHHCEEEECCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHH
ALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTINELQDMMNAQNA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAE
HHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH
VLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGR
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCC
GEFMPVADNETADGRSKNRRTEIIMAPKLDKLMQMLQ
CCEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHC
>Mature Secondary Structure
MKRLLFISVSALLLCSSCVSKKKYLLAENGRLEAIGRGDALKEELIKCKDDNDALNNRIA
CCEEEEEHHHHHHHHHHHHHHHCEEEECCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHH
ALIRDTTTMGRDIRNYQTMLNTNMGEQDKLNALLQQKMSELDERERTINELQDMMNAQNA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KVQNLLSSVKDALLGFNSDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAE
HHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH
VLNKQNDIDVYIEGHTDSKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGR
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCC
GEFMPVADNETADGRSKNRRTEIIMAPKLDKLMQMLQ
CCEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]