| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is agaR [H]
Identifier: 150006763
GI number: 150006763
Start: 97496
End: 99694
Strand: Reverse
Name: agaR [H]
Synonym: BDI_0089
Alternate gene names: 150006763
Gene position: 99694-97496 (Counterclockwise)
Preceding gene: 150006764
Following gene: 150006762
Centisome position: 2.07
GC content: 46.16
Gene sequence:
>2199_bases ATGAAAAATCTATTACTTACAGTTATCCTTTTGTGCTTTTGTTTGCCATTCGTAAAAGCCGCCGATCAAAAGATGATCTT AATCTCGACCAACGAGACGGACTTGATTTTACAAGTAGCCCCCAACGGACGGCTCTACCAAACTTATCTGGGAAATAAAT TAGTAAACGAATCCGAATTTGAGAACCTCTCATGGAATATCCAAGCCGGAACGGATGGCAGCGTATCAACCCGTGGATGG GAAGTATATCCTTGCTCAGGAGCGGAAGATTATTTCGAACCGGCTTTCGCCATCCAGCATAACGACGGAAACATGACTAG CATATTCAAGTATGTTTCCAGCGAATCTAAGAAACTAGACAATAACGTTACGGAGACAATTATCTCCCTGAAAGACGATG TATACCCAGTGGAGGCTAAATTACATTATGTAACCTTCGCTAAAGAAAACGTGATCAAGGCTTGGACTGAGATTCGTCAT ATGGAGAAAAAACCGGTCACGATTACCCAATACGCTTCCAATATGCTTTATTTCGAGAGTCCTCGCTATGTATTGACCGA GTTTAGCGGTGACTGGGCCAAGGAAGTACAGATGAGCAGCCAAGACTTGAAATTCGGGAAAAAGATTATCGATACGAAAC TAGGCTCCCGTGCCGCTATGCACGCTTACCCGTTTTTTGAGATTGGATTAGGTGCCCCGGCCAGTGAGAATACAGGAGAT GTTTTAATGGGAACGATCGGTTGGACTGGAAACTACCGCTTTACGTTCGAGGTGGACAACGCCGGTAACCTTCGTGTCAT CTCCGGCATCAATCCCTATGCGTCCGCCTATGAATTGAAACCGAACGAATGGTTCGTCACTCCTGAGTTTATCTTTACAT TGAGTAATCAAGGAACCGGAAAAGCCAGTCGTGATATCCATGATTGGGCACGTAATTACCAGATCAAGGATGGTAAAGGC GATCGCCTTACCCTACTGAACAACTGGGAATCGACCGGTTTCAATTTCAACGAGAAGAAATTGGAGGAATTAATGAAAGA AGCCAAGCACCTAGGTGTAGATATGTTCTTGCTGGACGATGGTTGGTTCGCTAATAAATACCCTCGTCAAAACGATAAGG CCGGATTGGGCGATTGGGAGGTTACACACGATAAGTTGCCGAACGGCATTCCTCATCTGGTGCAGACCGCTAAAGATGCC GGCGTGAAATTCGGTATCTGGATCGAGCCGGAGATGGTAAACCCCAAGAGCGAACTTTTCGAGAAACACCCGGATTGGGC GATCCATCTACCGAATCGTGAGACTTATTACTACCGCAATCAACTTGTCTTGGACTTAAGTAACCCGAAAGTACAGGATT ATGTATTCAGCGTGGTGGATAATATCATGATCGAGAATCCGGATCTGGCTTTCTTCAAATGGGATTGCAACAGCCCGATT ACCAATGTCTATTCCCCCTATCTTAAAGAGAAGCAGAATCAATTGTATATCGACCATGTACGAGGTGTCTATAACGTATT CAAACGGGTAGCCGAGAAATACCCTCACCTACCGATCATGCTTTGCTCCGGTGGGGGTGCCCGCTGTGATTACGAGGCAT TGAAATATTTCACGGAATTCTGGTGCAGCGACAACACCGATCCGATCGAGCGTTTGTATATCCAATGGGGATTCTCCCAG TTCTTCCCGGCAAAGGCAATGTGCGCCCACGTGACTAGCTGGAACAAGAATACCTCCATCAAGTTCCGTACCGACGTGGC CATGATGTGTAAGATGGGCTTCGATATCAGCTTGAAGGAAATGAACGATGACGAGATGAAATACTGCCAAGAAGCAGTTG CCAACTACAAACGTCTAAAGGGCACGATCCTCGACGGCGATCTGTACCGTCTAGTCTCCCCTTACGATACCAACCATTCA TCCGTGATGTACGTGGATAAGGCAAAAAGCAAATCCGTCCTATTCGCTTATGATATCCACCCTCGCTTCGGAGAAAAGAC TTTCCCCGTAAAGCTACAAGGATTGGACCCGAATAAGAAATATAAGGTACAAGAGATAAACCTCATGCCGGGCCAGAAAT CGACCTTGGTTACCGACGGAGGTACCTTCAGCGGAGATTTCTTGATGAAAATAGGAATGAACGTGTTCTCTACGGCTCAT GCCCATAGCAAGGTCATAGAGCTGACCGAGGCTCACTAA
Upstream 100 bases:
>100_bases CACGACGTGATCCTGAAAGAGCAGAATTAATTACAATATGTATTCTAGTAGAGGCGTGGCACGCTACGTCTCTACTATTT ACACATTCAAATAATTTACC
Downstream 100 bases:
>100_bases CTAAATTGTCAACAGAGAATGGACATTATCCGCGAGATAACCCCACTATCGGAAAAGGACTGCTTTTACATCGTAGACCG GCGTAAGACAGAATTTACCT
Product: alpha-glycosidase
Products: NA
Alternate protein names: Melibiase [H]
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MKNLLLTVILLCFCLPFVKAADQKMILISTNETDLILQVAPNGRLYQTYLGNKLVNESEFENLSWNIQAGTDGSVSTRGW EVYPCSGAEDYFEPAFAIQHNDGNMTSIFKYVSSESKKLDNNVTETIISLKDDVYPVEAKLHYVTFAKENVIKAWTEIRH MEKKPVTITQYASNMLYFESPRYVLTEFSGDWAKEVQMSSQDLKFGKKIIDTKLGSRAAMHAYPFFEIGLGAPASENTGD VLMGTIGWTGNYRFTFEVDNAGNLRVISGINPYASAYELKPNEWFVTPEFIFTLSNQGTGKASRDIHDWARNYQIKDGKG DRLTLLNNWESTGFNFNEKKLEELMKEAKHLGVDMFLLDDGWFANKYPRQNDKAGLGDWEVTHDKLPNGIPHLVQTAKDA GVKFGIWIEPEMVNPKSELFEKHPDWAIHLPNRETYYYRNQLVLDLSNPKVQDYVFSVVDNIMIENPDLAFFKWDCNSPI TNVYSPYLKEKQNQLYIDHVRGVYNVFKRVAEKYPHLPIMLCSGGGARCDYEALKYFTEFWCSDNTDPIERLYIQWGFSQ FFPAKAMCAHVTSWNKNTSIKFRTDVAMMCKMGFDISLKEMNDDEMKYCQEAVANYKRLKGTILDGDLYRLVSPYDTNHS SVMYVDKAKSKSVLFAYDIHPRFGEKTFPVKLQGLDPNKKYKVQEINLMPGQKSTLVTDGGTFSGDFLMKIGMNVFSTAH AHSKVIELTEAH
Sequences:
>Translated_732_residues MKNLLLTVILLCFCLPFVKAADQKMILISTNETDLILQVAPNGRLYQTYLGNKLVNESEFENLSWNIQAGTDGSVSTRGW EVYPCSGAEDYFEPAFAIQHNDGNMTSIFKYVSSESKKLDNNVTETIISLKDDVYPVEAKLHYVTFAKENVIKAWTEIRH MEKKPVTITQYASNMLYFESPRYVLTEFSGDWAKEVQMSSQDLKFGKKIIDTKLGSRAAMHAYPFFEIGLGAPASENTGD VLMGTIGWTGNYRFTFEVDNAGNLRVISGINPYASAYELKPNEWFVTPEFIFTLSNQGTGKASRDIHDWARNYQIKDGKG DRLTLLNNWESTGFNFNEKKLEELMKEAKHLGVDMFLLDDGWFANKYPRQNDKAGLGDWEVTHDKLPNGIPHLVQTAKDA GVKFGIWIEPEMVNPKSELFEKHPDWAIHLPNRETYYYRNQLVLDLSNPKVQDYVFSVVDNIMIENPDLAFFKWDCNSPI TNVYSPYLKEKQNQLYIDHVRGVYNVFKRVAEKYPHLPIMLCSGGGARCDYEALKYFTEFWCSDNTDPIERLYIQWGFSQ FFPAKAMCAHVTSWNKNTSIKFRTDVAMMCKMGFDISLKEMNDDEMKYCQEAVANYKRLKGTILDGDLYRLVSPYDTNHS SVMYVDKAKSKSVLFAYDIHPRFGEKTFPVKLQGLDPNKKYKVQEINLMPGQKSTLVTDGGTFSGDFLMKIGMNVFSTAH AHSKVIELTEAH >Mature_732_residues MKNLLLTVILLCFCLPFVKAADQKMILISTNETDLILQVAPNGRLYQTYLGNKLVNESEFENLSWNIQAGTDGSVSTRGW EVYPCSGAEDYFEPAFAIQHNDGNMTSIFKYVSSESKKLDNNVTETIISLKDDVYPVEAKLHYVTFAKENVIKAWTEIRH MEKKPVTITQYASNMLYFESPRYVLTEFSGDWAKEVQMSSQDLKFGKKIIDTKLGSRAAMHAYPFFEIGLGAPASENTGD VLMGTIGWTGNYRFTFEVDNAGNLRVISGINPYASAYELKPNEWFVTPEFIFTLSNQGTGKASRDIHDWARNYQIKDGKG DRLTLLNNWESTGFNFNEKKLEELMKEAKHLGVDMFLLDDGWFANKYPRQNDKAGLGDWEVTHDKLPNGIPHLVQTAKDA GVKFGIWIEPEMVNPKSELFEKHPDWAIHLPNRETYYYRNQLVLDLSNPKVQDYVFSVVDNIMIENPDLAFFKWDCNSPI TNVYSPYLKEKQNQLYIDHVRGVYNVFKRVAEKYPHLPIMLCSGGGARCDYEALKYFTEFWCSDNTDPIERLYIQWGFSQ FFPAKAMCAHVTSWNKNTSIKFRTDVAMMCKMGFDISLKEMNDDEMKYCQEAVANYKRLKGTILDGDLYRLVSPYDTNHS SVMYVDKAKSKSVLFAYDIHPRFGEKTFPVKLQGLDPNKKYKVQEINLMPGQKSTLVTDGGTFSGDFLMKIGMNVFSTAH AHSKVIELTEAH
Specific function: Alpha-galactosidase associated with the raffinose operon [H]
COG id: COG3345
COG function: function code G; Alpha-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 36 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002252 - InterPro: IPR017853 - InterPro: IPR000111 [H]
Pfam domain/function: PF02065 Melibiase [H]
EC number: =3.2.1.22 [H]
Molecular weight: Translated: 83755; Mature: 83755
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLTVILLCFCLPFVKAADQKMILISTNETDLILQVAPNGRLYQTYLGNKLVNESEF CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCHHCCCCCC ENLSWNIQAGTDGSVSTRGWEVYPCSGAEDYFEPAFAIQHNDGNMTSIFKYVSSESKKLD CCCEEEEECCCCCCCCCCCEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHCCHHHHC NNVTETIISLKDDVYPVEAKLHYVTFAKENVIKAWTEIRHMEKKPVTITQYASNMLYFES CHHHHHHHHHCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHCCEEEEEC PRYVLTEFSGDWAKEVQMSSQDLKFGKKIIDTKLGSRAAMHAYPFFEIGLGAPASENTGD CCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCC VLMGTIGWTGNYRFTFEVDNAGNLRVISGINPYASAYELKPNEWFVTPEFIFTLSNQGTG EEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCCCEEECHHEEEEECCCCCC KASRDIHDWARNYQIKDGKGDRLTLLNNWESTGFNFNEKKLEELMKEAKHLGVDMFLLDD CCCCHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC GWFANKYPRQNDKAGLGDWEVTHDKLPNGIPHLVQTAKDAGVKFGIWIEPEMVNPKSELF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH EKHPDWAIHLPNRETYYYRNQLVLDLSNPKVQDYVFSVVDNIMIENPDLAFFKWDCNSPI HCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCCH TNVYSPYLKEKQNQLYIDHVRGVYNVFKRVAEKYPHLPIMLCSGGGARCDYEALKYFTEF HHHHCHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH WCSDNTDPIERLYIQWGFSQFFPAKAMCAHVTSWNKNTSIKFRTDVAMMCKMGFDISLKE HCCCCCCHHHHEEEEECHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEC MNDDEMKYCQEAVANYKRLKGTILDGDLYRLVSPYDTNHSSVMYVDKAKSKSVLFAYDIH CCCHHHHHHHHHHHHHHHHCCEEECCCHHEEECCCCCCCCEEEEEECCCCCEEEEEEECC PRFGEKTFPVKLQGLDPNKKYKVQEINLMPGQKSTLVTDGGTFSGDFLMKIGMNVFSTAH CCCCCEECCEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHCHHHHHHHH AHSKVIELTEAH HHHHEEEEECCC >Mature Secondary Structure MKNLLLTVILLCFCLPFVKAADQKMILISTNETDLILQVAPNGRLYQTYLGNKLVNESEF CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCHHCCCCCC ENLSWNIQAGTDGSVSTRGWEVYPCSGAEDYFEPAFAIQHNDGNMTSIFKYVSSESKKLD CCCEEEEECCCCCCCCCCCEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHCCHHHHC NNVTETIISLKDDVYPVEAKLHYVTFAKENVIKAWTEIRHMEKKPVTITQYASNMLYFES CHHHHHHHHHCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHCCEEEEEC PRYVLTEFSGDWAKEVQMSSQDLKFGKKIIDTKLGSRAAMHAYPFFEIGLGAPASENTGD CCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCC VLMGTIGWTGNYRFTFEVDNAGNLRVISGINPYASAYELKPNEWFVTPEFIFTLSNQGTG EEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCCCEEECHHEEEEECCCCCC KASRDIHDWARNYQIKDGKGDRLTLLNNWESTGFNFNEKKLEELMKEAKHLGVDMFLLDD CCCCHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC GWFANKYPRQNDKAGLGDWEVTHDKLPNGIPHLVQTAKDAGVKFGIWIEPEMVNPKSELF CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH EKHPDWAIHLPNRETYYYRNQLVLDLSNPKVQDYVFSVVDNIMIENPDLAFFKWDCNSPI HCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCCH TNVYSPYLKEKQNQLYIDHVRGVYNVFKRVAEKYPHLPIMLCSGGGARCDYEALKYFTEF HHHHCHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH WCSDNTDPIERLYIQWGFSQFFPAKAMCAHVTSWNKNTSIKFRTDVAMMCKMGFDISLKE HCCCCCCHHHHEEEEECHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEC MNDDEMKYCQEAVANYKRLKGTILDGDLYRLVSPYDTNHSSVMYVDKAKSKSVLFAYDIH CCCHHHHHHHHHHHHHHHHCCEEECCCHHEEECCCCCCCCEEEEEECCCCCEEEEEEECC PRFGEKTFPVKLQGLDPNKKYKVQEINLMPGQKSTLVTDGGTFSGDFLMKIGMNVFSTAH CCCCCEECCEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHCHHHHHHHH AHSKVIELTEAH HHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA