| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150006733
Identifier: 150006733
GI number: 150006733
Start: 61406
End: 62578
Strand: Reverse
Name: 150006733
Synonym: BDI_0059
Alternate gene names: NA
Gene position: 62578-61406 (Counterclockwise)
Preceding gene: 150006734
Following gene: 150006732
Centisome position: 1.3
GC content: 49.45
Gene sequence:
>1173_bases ATGGAACAATTTCAAGAAAAAGTAAACGAACTCTTCGCTAAACACGAAACCTTGTTAAGCCGGAAAAATATCCCTTTAGA AGACGGAAACGGAATCTTCACCCGTTATCAACACCCTGTACTGACAGCTGCGCATACCCCGATCTTCTGGAGATATGACT TAAATGAAAAGACAAACCCCTACTTGATGGAACGCATCGGCATGAACGCAACCATGAACTCCGGTGCGATCAAATGGAAT GACAAATATATATTAATGGTACGTGTAGAAGGAAGCGACCGTAAATCCTTCTTCGCCGTAGCCGAAAGCCCGAACGGAGT AGACAATTTCCGCTTTTGGGATTACCCGGTAACCATGCCGGACGATCTTGTCCCGGCCACGAATATTTACGACATGCGCC TAACCGCTCATGAAGACGGCTGGGTTTACGGAATCTTTTGCGCCGAGCGCCATGACCCGAACGCAGCTCCCGGAGATCTA TCCTCGGCAACCGCCACGGCAGCTATCGCCCGGACAAAAGACTTGAAAAACTGGGAACGTCTCCCGGATTTAAAGACCAA GAGCCAACAACGTAACGTCGTATTACATCCGGAATTCGTAAATGGTAAATACGCCCTTTACACCCGCCCCCAAGACGGAT TTATCGACGCAGGAAGTGGCGGTGGTATCGGATGGGCCTTGATTGATGATATCACGCACGCCGAAGTCAAGGAAGAAACC ATCATCGACCAACGTTACTACCATACGATCAAGGAAGTGAAAAATGGCGAAGGCCCCCACCCGATCAAGACACCGAGAGG TTGGTTACATCTCGCCCATGGCGTACGGGGATGCGCCGCCGGATTACGTTACGTGCTTTATATGTATATGACCGCATTGG AAGATCCCACGAGACCTATCGCCACACCCGCCGGCTATTTCATGGCTCCGGAAAATGAGGAACGGATCGGCGATGTATCC AACGTTTTATTCTCTAACGGATGGATCGCGGATGAGGATGGAACCGTGTATATTTACTATGCGTCTTCCGATACCCGTAT GCACGTGGCTGTATCCACAATCGATAAATTGGTAGATTACTGCATGAACACTCCGGCCGACGGGCTGACTACGACCGCAT CTGTCGAGACGCTGAAAAAGCTAATCGATCGAAATCTTCCACTCCTGAAATAA
Upstream 100 bases:
>100_bases CATCATACATAAACCAGATAAATCACGTCATATCTAGTTGTAGAGACGGGGCGTGCCCCGTCTCCCACCATCTGATAATA TCATTTAAAGCAAAAACATC
Downstream 100 bases:
>100_bases CCTACAAAAACCACTCATATGATTAAACTAACAGAGAAGATAGGCTACGGTTTCGGGGACATGGCATCGTCCATGTTCTG GAAACTGTTTGGCGCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosidase-Like Protein; Glycosylase; Conserved Domain Protein; Glycosidase-Related; Unknwon Conserved Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MEQFQEKVNELFAKHETLLSRKNIPLEDGNGIFTRYQHPVLTAAHTPIFWRYDLNEKTNPYLMERIGMNATMNSGAIKWN DKYILMVRVEGSDRKSFFAVAESPNGVDNFRFWDYPVTMPDDLVPATNIYDMRLTAHEDGWVYGIFCAERHDPNAAPGDL SSATATAAIARTKDLKNWERLPDLKTKSQQRNVVLHPEFVNGKYALYTRPQDGFIDAGSGGGIGWALIDDITHAEVKEET IIDQRYYHTIKEVKNGEGPHPIKTPRGWLHLAHGVRGCAAGLRYVLYMYMTALEDPTRPIATPAGYFMAPENEERIGDVS NVLFSNGWIADEDGTVYIYYASSDTRMHVAVSTIDKLVDYCMNTPADGLTTTASVETLKKLIDRNLPLLK
Sequences:
>Translated_390_residues MEQFQEKVNELFAKHETLLSRKNIPLEDGNGIFTRYQHPVLTAAHTPIFWRYDLNEKTNPYLMERIGMNATMNSGAIKWN DKYILMVRVEGSDRKSFFAVAESPNGVDNFRFWDYPVTMPDDLVPATNIYDMRLTAHEDGWVYGIFCAERHDPNAAPGDL SSATATAAIARTKDLKNWERLPDLKTKSQQRNVVLHPEFVNGKYALYTRPQDGFIDAGSGGGIGWALIDDITHAEVKEET IIDQRYYHTIKEVKNGEGPHPIKTPRGWLHLAHGVRGCAAGLRYVLYMYMTALEDPTRPIATPAGYFMAPENEERIGDVS NVLFSNGWIADEDGTVYIYYASSDTRMHVAVSTIDKLVDYCMNTPADGLTTTASVETLKKLIDRNLPLLK >Mature_390_residues MEQFQEKVNELFAKHETLLSRKNIPLEDGNGIFTRYQHPVLTAAHTPIFWRYDLNEKTNPYLMERIGMNATMNSGAIKWN DKYILMVRVEGSDRKSFFAVAESPNGVDNFRFWDYPVTMPDDLVPATNIYDMRLTAHEDGWVYGIFCAERHDPNAAPGDL SSATATAAIARTKDLKNWERLPDLKTKSQQRNVVLHPEFVNGKYALYTRPQDGFIDAGSGGGIGWALIDDITHAEVKEET IIDQRYYHTIKEVKNGEGPHPIKTPRGWLHLAHGVRGCAAGLRYVLYMYMTALEDPTRPIATPAGYFMAPENEERIGDVS NVLFSNGWIADEDGTVYIYYASSDTRMHVAVSTIDKLVDYCMNTPADGLTTTASVETLKKLIDRNLPLLK
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44047; Mature: 44047
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFQEKVNELFAKHETLLSRKNIPLEDGNGIFTRYQHPVLTAAHTPIFWRYDLNEKTNP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCCH YLMERIGMNATMNSGAIKWNDKYILMVRVEGSDRKSFFAVAESPNGVDNFRFWDYPVTMP HHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCC DDLVPATNIYDMRLTAHEDGWVYGIFCAERHDPNAAPGDLSSATATAAIARTKDLKNWER CCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPDLKTKSQQRNVVLHPEFVNGKYALYTRPQDGFIDAGSGGGIGWALIDDITHAEVKEET CCCCCCCHHCCCEEEEEEECCCEEEEEECCCCCCEECCCCCCEEEHHHHCCHHHHHHHHH IIDQRYYHTIKEVKNGEGPHPIKTPRGWLHLAHGVRGCAAGLRYVLYMYMTALEDPTRPI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATPAGYFMAPENEERIGDVSNVLFSNGWIADEDGTVYIYYASSDTRMHVAVSTIDKLVDY CCCCCCEECCCCHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCEEEEHHHHHHHHHHH CMNTPADGLTTTASVETLKKLIDRNLPLLK HHCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEQFQEKVNELFAKHETLLSRKNIPLEDGNGIFTRYQHPVLTAAHTPIFWRYDLNEKTNP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCCH YLMERIGMNATMNSGAIKWNDKYILMVRVEGSDRKSFFAVAESPNGVDNFRFWDYPVTMP HHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCC DDLVPATNIYDMRLTAHEDGWVYGIFCAERHDPNAAPGDLSSATATAAIARTKDLKNWER CCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPDLKTKSQQRNVVLHPEFVNGKYALYTRPQDGFIDAGSGGGIGWALIDDITHAEVKEET CCCCCCCHHCCCEEEEEEECCCEEEEEECCCCCCEECCCCCCEEEHHHHCCHHHHHHHHH IIDQRYYHTIKEVKNGEGPHPIKTPRGWLHLAHGVRGCAAGLRYVLYMYMTALEDPTRPI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATPAGYFMAPENEERIGDVSNVLFSNGWIADEDGTVYIYYASSDTRMHVAVSTIDKLVDY CCCCCCEECCCCHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCEEEEHHHHHHHHHHH CMNTPADGLTTTASVETLKKLIDRNLPLLK HHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA