| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yagG [H]
Identifier: 150006732
GI number: 150006732
Start: 59996
End: 61387
Strand: Reverse
Name: yagG [H]
Synonym: BDI_0058
Alternate gene names: 150006732
Gene position: 61387-59996 (Counterclockwise)
Preceding gene: 150006733
Following gene: 150006731
Centisome position: 1.28
GC content: 46.84
Gene sequence:
>1392_bases ATGATTAAACTAACAGAGAAGATAGGCTACGGTTTCGGGGACATGGCATCGTCCATGTTCTGGAAACTGTTTGGCGCTTA CTTGATGATTTTCTATACGGACGTATTCGGATTACCGGCAGCAGCCGTAGGTACGATGTTTTTGATAACTCGTATATGGG ACTCGGTCTTTGACCCGATTGTCGGCGTTGCGGCGGATCGTACGCAAACACGCTGGGGAAAATTTCGCCCTTATTTGCTT TGGCTGGCGATCCCGTTCGCCGCTATCGGAGTGCTCACTTTCATGACTCCTTCTTTCGGACAAACAGGTAATTTGATCTA TGCCTATATCACCTATTCCTTGATGATGATGGTGTACTCCGCTATAAACGTGCCTTATGCGTCCTTGCTTGGAGTAATGA GCCCGTTGCCACAAGACCGTAATACCCTTTCTACGTACCGTATGGTATTCGCCTATATTGGCAGTTTTATAGCCCTGTTG CTATTCATGCCGATGGTGCGTTTCTTTAGTGGAAATAGCGATGAATTGGCGGATCAACAACATGGATGGACCATGGCTGT CGTAGTTATCGCTATCCTGTGCGCCATTCTCTTTTATGGATGTTTCGCATGGACAAAAGAACGGGTAAAACCGATTAAAG AGCAACAAGGCTCGTTAAAAGATGACTTGAGAGATCTATTGCACAACAAGCCTTGGTGGATACTATTGGGAGCAGGTGTC TCCGCTCTGGTTTTCAATTCCATCCGCGACGGGGCTACCGTATATTATTTCAAATACTTTATCATTGAGGAAGCCTATGC CAATGTATCTCTTTTCGGAGTCTCCTTCGTCTTAAGCGGATTATATCTGGCGGTAGGACAGGCGGCCAATATTGTCGGCG TGATCTTGGCCGCCCCATTAAGCAACCAGATCGGAAAGAAAAGAACCTATATGGGCTCCATGCTGATCGCCTCGGTTTTA AGCATCCTCTTTTTCTGGCTCGACAAGACGGATCTAGCCCTGATATTCACGTTCCAAGTGTTCATCAGTATTTGTGCCGG TAGTATTTTCCCCCTACTTTGGTCCATGTATGCCGATTGCACGGACTACTCAGAACTAAAAACAGGGAACCGTGCCACAG GATTGATCTTCAGTTCCTCGTCCATGAGCCAGAAATTCGGATGGGCGATCGGCACGGCAATCACAGGCTGGCTACTCGCT TTCTTCGGGTTTCAGGCCAATACCGTACAAAGCGAGGAAACGATTAGCGGAATCAAGATGTTCCTCAGTTTCTTACCGGC CGTAGGTACGATCCTGTCCGTTGTATTTATCGCCTTCTACCCGCTTAGCGAGACAAAGATGAAGGAAATCACCGCTACGT TAGAAACCAAAAGAAAAGAAACAAATGAATAA
Upstream 100 bases:
>100_bases TCCGGCCGACGGGCTGACTACGACCGCATCTGTCGAGACGCTGAAAAAGCTAATCGATCGAAATCTTCCACTCCTGAAAT AACCTACAAAAACCACTCAT
Downstream 100 bases:
>100_bases AATCACCGAAGATTTACAAAACGAGGTTCAATGGGAGCTAGAGAACAATATCCTCCCTTTCTGGATGAACCGAATGATAG ATAGTGAGTATGGTGGTTTC
Product: putative cation symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MIKLTEKIGYGFGDMASSMFWKLFGAYLMIFYTDVFGLPAAAVGTMFLITRIWDSVFDPIVGVAADRTQTRWGKFRPYLL WLAIPFAAIGVLTFMTPSFGQTGNLIYAYITYSLMMMVYSAINVPYASLLGVMSPLPQDRNTLSTYRMVFAYIGSFIALL LFMPMVRFFSGNSDELADQQHGWTMAVVVIAILCAILFYGCFAWTKERVKPIKEQQGSLKDDLRDLLHNKPWWILLGAGV SALVFNSIRDGATVYYFKYFIIEEAYANVSLFGVSFVLSGLYLAVGQAANIVGVILAAPLSNQIGKKRTYMGSMLIASVL SILFFWLDKTDLALIFTFQVFISICAGSIFPLLWSMYADCTDYSELKTGNRATGLIFSSSSMSQKFGWAIGTAITGWLLA FFGFQANTVQSEETISGIKMFLSFLPAVGTILSVVFIAFYPLSETKMKEITATLETKRKETNE
Sequences:
>Translated_463_residues MIKLTEKIGYGFGDMASSMFWKLFGAYLMIFYTDVFGLPAAAVGTMFLITRIWDSVFDPIVGVAADRTQTRWGKFRPYLL WLAIPFAAIGVLTFMTPSFGQTGNLIYAYITYSLMMMVYSAINVPYASLLGVMSPLPQDRNTLSTYRMVFAYIGSFIALL LFMPMVRFFSGNSDELADQQHGWTMAVVVIAILCAILFYGCFAWTKERVKPIKEQQGSLKDDLRDLLHNKPWWILLGAGV SALVFNSIRDGATVYYFKYFIIEEAYANVSLFGVSFVLSGLYLAVGQAANIVGVILAAPLSNQIGKKRTYMGSMLIASVL SILFFWLDKTDLALIFTFQVFISICAGSIFPLLWSMYADCTDYSELKTGNRATGLIFSSSSMSQKFGWAIGTAITGWLLA FFGFQANTVQSEETISGIKMFLSFLPAVGTILSVVFIAFYPLSETKMKEITATLETKRKETNE >Mature_463_residues MIKLTEKIGYGFGDMASSMFWKLFGAYLMIFYTDVFGLPAAAVGTMFLITRIWDSVFDPIVGVAADRTQTRWGKFRPYLL WLAIPFAAIGVLTFMTPSFGQTGNLIYAYITYSLMMMVYSAINVPYASLLGVMSPLPQDRNTLSTYRMVFAYIGSFIALL LFMPMVRFFSGNSDELADQQHGWTMAVVVIAILCAILFYGCFAWTKERVKPIKEQQGSLKDDLRDLLHNKPWWILLGAGV SALVFNSIRDGATVYYFKYFIIEEAYANVSLFGVSFVLSGLYLAVGQAANIVGVILAAPLSNQIGKKRTYMGSMLIASVL SILFFWLDKTDLALIFTFQVFISICAGSIFPLLWSMYADCTDYSELKTGNRATGLIFSSSSMSQKFGWAIGTAITGWLLA FFGFQANTVQSEETISGIKMFLSFLPAVGTILSVVFIAFYPLSETKMKEITATLETKRKETNE
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Homo sapiens, GI42713696, Length=494, Percent_Identity=21.4574898785425, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI211063479, Length=508, Percent_Identity=22.0472440944882, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1786466, Length=463, Percent_Identity=34.7732181425486, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI87082306, Length=465, Percent_Identity=32.6881720430108, Blast_Score=252, Evalue=4e-68, Organism=Escherichia coli, GI1787902, Length=462, Percent_Identity=32.034632034632, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI145693206, Length=468, Percent_Identity=25.2136752136752, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI48994989, Length=470, Percent_Identity=27.2340425531915, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1790561, Length=465, Percent_Identity=25.8064516129032, Blast_Score=151, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51614; Mature: 51614
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLTEKIGYGFGDMASSMFWKLFGAYLMIFYTDVFGLPAAAVGTMFLITRIWDSVFDPI CCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGVAADRTQTRWGKFRPYLLWLAIPFAAIGVLTFMTPSFGQTGNLIYAYITYSLMMMVYS HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AINVPYASLLGVMSPLPQDRNTLSTYRMVFAYIGSFIALLLFMPMVRFFSGNSDELADQQ HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH HGWTMAVVVIAILCAILFYGCFAWTKERVKPIKEQQGSLKDDLRDLLHNKPWWILLGAGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCH SALVFNSIRDGATVYYFKYFIIEEAYANVSLFGVSFVLSGLYLAVGQAANIVGVILAAPL HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SNQIGKKRTYMGSMLIASVLSILFFWLDKTDLALIFTFQVFISICAGSIFPLLWSMYADC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDYSELKTGNRATGLIFSSSSMSQKFGWAIGTAITGWLLAFFGFQANTVQSEETISGIKM CCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FLSFLPAVGTILSVVFIAFYPLSETKMKEITATLETKRKETNE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKLTEKIGYGFGDMASSMFWKLFGAYLMIFYTDVFGLPAAAVGTMFLITRIWDSVFDPI CCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGVAADRTQTRWGKFRPYLLWLAIPFAAIGVLTFMTPSFGQTGNLIYAYITYSLMMMVYS HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AINVPYASLLGVMSPLPQDRNTLSTYRMVFAYIGSFIALLLFMPMVRFFSGNSDELADQQ HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH HGWTMAVVVIAILCAILFYGCFAWTKERVKPIKEQQGSLKDDLRDLLHNKPWWILLGAGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCH SALVFNSIRDGATVYYFKYFIIEEAYANVSLFGVSFVLSGLYLAVGQAANIVGVILAAPL HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SNQIGKKRTYMGSMLIASVLSILFFWLDKTDLALIFTFQVFISICAGSIFPLLWSMYADC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDYSELKTGNRATGLIFSSSSMSQKFGWAIGTAITGWLLAFFGFQANTVQSEETISGIKM CCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FLSFLPAVGTILSVVFIAFYPLSETKMKEITATLETKRKETNE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]