| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006615
Identifier: 150006615
GI number: 150006615
Start: 5087029
End: 5089281
Strand: Reverse
Name: 150006615
Synonym: BVU_4135
Alternate gene names: NA
Gene position: 5089281-5087029 (Counterclockwise)
Preceding gene: 150006616
Following gene: 150006614
Centisome position: 98.57
GC content: 42.12
Gene sequence:
>2253_bases ATGAAGAAACAAATTTTGTTATCGGCTGTTCTGGCTTGTATCTCAGTTTTTTCTGCGGCAGCACAGAAAGAGCCGGTAGA TTATGTAAACCCTTTTGTGGGTACTACTAATTACGGTACGACAAACCCCGGAGCATTAACCCCTCATGGAATGATGTCGG TGACTCCTTTCAATGTGATGGGGGTTCCCGAAGGGGATAAGGATAAAGACAAGCAATGGTGGTCCACTCCATACGAATTC AATAATAAATATCTTACCGGCTTTGCGCACGTTAATCTTAGCGGGGTAGGCTGTCCGGAATTGGGATCATTGTTATTAAT GCCTACCACCGGCAAACTGGATGTGGATTATCATAATTATGGAAGCTTCTATCAAGGTGAAACTGCAAATCCGGGTTATT ATACCAATATACTGGATAAATACAATGTGAAATGTGAACTGACTGCCACTCCACGTACCAGTATGGCACGCTTTACTTTT CCTGCCGGACAAAGCAATATCTTGTTGAATCTGGGAGAGGGATTGACCAATGAGAGTGGTGCTACCGTTCGTTTTGTAAA CGACCGTGAGATTGAAGGTACCAAATTGTTGGGAACTTTCTGTTATAATCCTCAGGCGGTATTTCCTATCTATTTTGTAA TGCGTATCAACAAAGTACCGGCAAAACGCGGTTATTGGAAAATGATGCGTCCGATGGGTGTGGAGGCGCAATGGGATGAT ACGGCCGGTAAATACAAACTCTATACTGCTTATACAAAAGAAATAAGCGGAGATGATATAGGAGTGTGGTTTACTTACGA TACCACAGCGGAAGAAGTGATTGAAGTCAGTATGGGCGTGTCTTTTGTCAGCATAGAGAATGCCCGTTTGAATCTGGAAA AAGAACAGCCTTTCGGTACAACATTCGACAAACTGCGTGCGGAAGCCCGTAAGAAATGGAACGATGATCTTTCCCGTATC AAAGTGGAAGGTGGAACGGAAGAGCAAAAAGGAGTATTCTATACCGCTATGTATCACACGATGGTTCATCCGAATATTTT GCAGGATGTAAGCGGACAATATCCACAAATGGAGGGAGATAAGATTTTGACCACCAACCATAACCGTTACACGGTATTCT CATTGTGGGATACTTATCGTAACTATCACCAGTTGATGACTTTGGTATATCCGGAGCGTCAGATGGATATGATTCACACC ATGATGGGCATATACAAGGAACACGGATGGTTCCCGAAATGGGAATTGTATGGTCGTGAAACATTGACGATGGAAGGTGA CCCTTCTATTCCTGTTCTGGTAGACAGTTGGATGAAGGGATTGCAAGACTTTGACATTGACGAAGCTTATAAGGGAATGT ATAAGTCGGCCACTACTCCGGGCAAGGATAATCTGATGCGTCCGGATAATGACGATTATATGTCCAAAGGGTATGTGCCG ATGGAAAGTCAGTATGATAATTCGGTTTCTCATGCTTTGGAATACTATGTTGCCGACTATGCACTTTCTACCTTGGCGGA GGCTTTAGGTAAGAAAGAAGATGCGAAATTGTTCCGCAAACGTTCTATGGGCTATAAAAATTATTATAGCAAGGATTTCG GAACCTTGCGTCCGATAACTAAAGAAGGCAAATTCTATGAACCGTTTGATCCGAAAGAAGGAGCTAATTTTGCACCTAGT CCCGGTTTCCATGAAGGTAATGCATGGAATTACACTTTCTTTGTGCCTCATGATATCAATGGCTTGGTAAAGTTGATGGG GGGCGACAAGAAATTTGTTGATAAATTGCAAAGCGTGTTTGATGAAGGGAATTATGATCCGGCCAATGAACCCGATATAG CCTATCCTTACCTGTTCAGTCGTTTCAAAGGTGAAGAATGGCGTACACAGAAATTGGTGAAGGAATTGCTGGCTAAGTAT TTCACAACTAAGCCGGATGGAATTCCCGGCAATGATGATACGGGTACGATGTCTGCATGGGCTATATTCAGTATGATGGG ATTCTATCCGGATTGTCCGGGTGTGCCCGAATATACATTGACCACTCCTACTTTTGATAAAGTGACCGTTCAGCTTGATC CTAAATATTGGGGCAAGAAAGAATTGGTTATCAAGAAAGAAGGACAAGGGGATTATATAAAGGAAATCAGACTGGGCAAT AAGAAGATTAATAAATATTTGATTTCGCATGATGATTTGATCAAGGCAGGTGAAATTACTTTTATAGTAACAGAAAATCC TAATAAGAAATAA
Upstream 100 bases:
>100_bases GTTACATACGTTATCAGGCATCTTCGGGCGAATTCGGAGGTTTCTTGTTTACAGATGAAATTGTAGTGAAATAATAGAAC TTATATAAACAACAAATAGC
Downstream 100 bases:
>100_bases CTATGAATACGAAACGATTTTTGTGTGCTGCGTTAGGAGCTGTTTGTTATTTTGCTTTTTTGCAAGCGCAGGTACGTACA GAGCAGACTTTCGAAAAAGG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MKKQILLSAVLACISVFSAAAQKEPVDYVNPFVGTTNYGTTNPGALTPHGMMSVTPFNVMGVPEGDKDKDKQWWSTPYEF NNKYLTGFAHVNLSGVGCPELGSLLLMPTTGKLDVDYHNYGSFYQGETANPGYYTNILDKYNVKCELTATPRTSMARFTF PAGQSNILLNLGEGLTNESGATVRFVNDREIEGTKLLGTFCYNPQAVFPIYFVMRINKVPAKRGYWKMMRPMGVEAQWDD TAGKYKLYTAYTKEISGDDIGVWFTYDTTAEEVIEVSMGVSFVSIENARLNLEKEQPFGTTFDKLRAEARKKWNDDLSRI KVEGGTEEQKGVFYTAMYHTMVHPNILQDVSGQYPQMEGDKILTTNHNRYTVFSLWDTYRNYHQLMTLVYPERQMDMIHT MMGIYKEHGWFPKWELYGRETLTMEGDPSIPVLVDSWMKGLQDFDIDEAYKGMYKSATTPGKDNLMRPDNDDYMSKGYVP MESQYDNSVSHALEYYVADYALSTLAEALGKKEDAKLFRKRSMGYKNYYSKDFGTLRPITKEGKFYEPFDPKEGANFAPS PGFHEGNAWNYTFFVPHDINGLVKLMGGDKKFVDKLQSVFDEGNYDPANEPDIAYPYLFSRFKGEEWRTQKLVKELLAKY FTTKPDGIPGNDDTGTMSAWAIFSMMGFYPDCPGVPEYTLTTPTFDKVTVQLDPKYWGKKELVIKKEGQGDYIKEIRLGN KKINKYLISHDDLIKAGEITFIVTENPNKK
Sequences:
>Translated_750_residues MKKQILLSAVLACISVFSAAAQKEPVDYVNPFVGTTNYGTTNPGALTPHGMMSVTPFNVMGVPEGDKDKDKQWWSTPYEF NNKYLTGFAHVNLSGVGCPELGSLLLMPTTGKLDVDYHNYGSFYQGETANPGYYTNILDKYNVKCELTATPRTSMARFTF PAGQSNILLNLGEGLTNESGATVRFVNDREIEGTKLLGTFCYNPQAVFPIYFVMRINKVPAKRGYWKMMRPMGVEAQWDD TAGKYKLYTAYTKEISGDDIGVWFTYDTTAEEVIEVSMGVSFVSIENARLNLEKEQPFGTTFDKLRAEARKKWNDDLSRI KVEGGTEEQKGVFYTAMYHTMVHPNILQDVSGQYPQMEGDKILTTNHNRYTVFSLWDTYRNYHQLMTLVYPERQMDMIHT MMGIYKEHGWFPKWELYGRETLTMEGDPSIPVLVDSWMKGLQDFDIDEAYKGMYKSATTPGKDNLMRPDNDDYMSKGYVP MESQYDNSVSHALEYYVADYALSTLAEALGKKEDAKLFRKRSMGYKNYYSKDFGTLRPITKEGKFYEPFDPKEGANFAPS PGFHEGNAWNYTFFVPHDINGLVKLMGGDKKFVDKLQSVFDEGNYDPANEPDIAYPYLFSRFKGEEWRTQKLVKELLAKY FTTKPDGIPGNDDTGTMSAWAIFSMMGFYPDCPGVPEYTLTTPTFDKVTVQLDPKYWGKKELVIKKEGQGDYIKEIRLGN KKINKYLISHDDLIKAGEITFIVTENPNKK >Mature_750_residues MKKQILLSAVLACISVFSAAAQKEPVDYVNPFVGTTNYGTTNPGALTPHGMMSVTPFNVMGVPEGDKDKDKQWWSTPYEF NNKYLTGFAHVNLSGVGCPELGSLLLMPTTGKLDVDYHNYGSFYQGETANPGYYTNILDKYNVKCELTATPRTSMARFTF PAGQSNILLNLGEGLTNESGATVRFVNDREIEGTKLLGTFCYNPQAVFPIYFVMRINKVPAKRGYWKMMRPMGVEAQWDD TAGKYKLYTAYTKEISGDDIGVWFTYDTTAEEVIEVSMGVSFVSIENARLNLEKEQPFGTTFDKLRAEARKKWNDDLSRI KVEGGTEEQKGVFYTAMYHTMVHPNILQDVSGQYPQMEGDKILTTNHNRYTVFSLWDTYRNYHQLMTLVYPERQMDMIHT MMGIYKEHGWFPKWELYGRETLTMEGDPSIPVLVDSWMKGLQDFDIDEAYKGMYKSATTPGKDNLMRPDNDDYMSKGYVP MESQYDNSVSHALEYYVADYALSTLAEALGKKEDAKLFRKRSMGYKNYYSKDFGTLRPITKEGKFYEPFDPKEGANFAPS PGFHEGNAWNYTFFVPHDINGLVKLMGGDKKFVDKLQSVFDEGNYDPANEPDIAYPYLFSRFKGEEWRTQKLVKELLAKY FTTKPDGIPGNDDTGTMSAWAIFSMMGFYPDCPGVPEYTLTTPTFDKVTVQLDPKYWGKKELVIKKEGQGDYIKEIRLGN KKINKYLISHDDLIKAGEITFIVTENPNKK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85447; Mature: 85447
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQILLSAVLACISVFSAAAQKEPVDYVNPFVGTTNYGTTNPGALTPHGMMSVTPFNVM CCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEE GVPEGDKDKDKQWWSTPYEFNNKYLTGFAHVNLSGVGCPELGSLLLMPTTGKLDVDYHNY ECCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCC GSFYQGETANPGYYTNILDKYNVKCELTATPRTSMARFTFPAGQSNILLNLGEGLTNESG CCEECCCCCCCCEEEHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCCC ATVRFVNDREIEGTKLLGTFCYNPQAVFPIYFVMRINKVPAKRGYWKMMRPMGVEAQWDD CEEEEECCCCCCCEEEEEEEECCCCHHHHEEEEEEECCCCCCCCHHHHHCCCCCCCCCCC TAGKYKLYTAYTKEISGDDIGVWFTYDTTAEEVIEVSMGVSFVSIENARLNLEKEQPFGT CCCCEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEECCEEEEECCCCCCC TFDKLRAEARKKWNDDLSRIKVEGGTEEQKGVFYTAMYHTMVHPNILQDVSGQYPQMEGD CHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEHHHHCCCHHHHHHCCCCCCCCCC KILTTNHNRYTVFSLWDTYRNYHQLMTLVYPERQMDMIHTMMGIYKEHGWFPKWELYGRE EEEEECCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCE TLTMEGDPSIPVLVDSWMKGLQDFDIDEAYKGMYKSATTPGKDNLMRPDNDDYMSKGYVP EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCC MESQYDNSVSHALEYYVADYALSTLAEALGKKEDAKLFRKRSMGYKNYYSKDFGTLRPIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCC KEGKFYEPFDPKEGANFAPSPGFHEGNAWNYTFFVPHDINGLVKLMGGDKKFVDKLQSVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHH DEGNYDPANEPDIAYPYLFSRFKGEEWRTQKLVKELLAKYFTTKPDGIPGNDDTGTMSAW HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH AIFSMMGFYPDCPGVPEYTLTTPTFDKVTVQLDPKYWGKKELVIKKEGQGDYIKEIRLGN HHHHHHHCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHCCC KKINKYLISHDDLIKAGEITFIVTENPNKK HHHHHHHCCCCCEEECCCEEEEEECCCCCC >Mature Secondary Structure MKKQILLSAVLACISVFSAAAQKEPVDYVNPFVGTTNYGTTNPGALTPHGMMSVTPFNVM CCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEE GVPEGDKDKDKQWWSTPYEFNNKYLTGFAHVNLSGVGCPELGSLLLMPTTGKLDVDYHNY ECCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCC GSFYQGETANPGYYTNILDKYNVKCELTATPRTSMARFTFPAGQSNILLNLGEGLTNESG CCEECCCCCCCCEEEHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCCC ATVRFVNDREIEGTKLLGTFCYNPQAVFPIYFVMRINKVPAKRGYWKMMRPMGVEAQWDD CEEEEECCCCCCCEEEEEEEECCCCHHHHEEEEEEECCCCCCCCHHHHHCCCCCCCCCCC TAGKYKLYTAYTKEISGDDIGVWFTYDTTAEEVIEVSMGVSFVSIENARLNLEKEQPFGT CCCCEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEECCEEEEECCCCCCC TFDKLRAEARKKWNDDLSRIKVEGGTEEQKGVFYTAMYHTMVHPNILQDVSGQYPQMEGD CHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEHHHHCCCHHHHHHCCCCCCCCCC KILTTNHNRYTVFSLWDTYRNYHQLMTLVYPERQMDMIHTMMGIYKEHGWFPKWELYGRE EEEEECCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCE TLTMEGDPSIPVLVDSWMKGLQDFDIDEAYKGMYKSATTPGKDNLMRPDNDDYMSKGYVP EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCC MESQYDNSVSHALEYYVADYALSTLAEALGKKEDAKLFRKRSMGYKNYYSKDFGTLRPIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCC KEGKFYEPFDPKEGANFAPSPGFHEGNAWNYTFFVPHDINGLVKLMGGDKKFVDKLQSVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHH DEGNYDPANEPDIAYPYLFSRFKGEEWRTQKLVKELLAKYFTTKPDGIPGNDDTGTMSAW HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH AIFSMMGFYPDCPGVPEYTLTTPTFDKVTVQLDPKYWGKKELVIKKEGQGDYIKEIRLGN HHHHHHHCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHCCC KKINKYLISHDDLIKAGEITFIVTENPNKK HHHHHHHCCCCCEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA