Click here to switch to the map view.

The map label for this gene is rfaB [C]

Identifier: 150006457

GI number: 150006457

Start: 4894479

End: 4895630

Strand: Direct

Name: rfaB [C]

Synonym: BVU_3976

Alternate gene names: 150006457

Gene position: 4894479-4895630 (Clockwise)

Preceding gene: 150006456

Following gene: 150006458

Centisome position: 94.8

GC content: 45.05

Gene sequence:

>1152_bases
ATGACCATCGTTTATCTATACACAGCACTATGCACCGTGGGAGGCGCAGACCGGAGCATCATCCAAAAAGCGAACTATCT
GGCTGACGAAATGCATCAGGATGTATTTATTATCACAGATTCACAAAAAGAACGCCCGCCCGTTTTCCCGATATCTCCCA
GAATCAGGCACATTGACATAGGAATTGATTTTGACAGACAATATCATCACAACCTGTTAGTAAGAGGATATTATTATTTT
ACCCTGATGCACCTGTACAGAAAGAAGCTGGAGTATTGGCTGAAAACCTTGAAACCGGATATTGTCATCAGCACATTGGG
CCGAGAATTGGATTTTCTGACACAACTGGATGATGGAAGCGTAAAAATAGGAGAATCCCATATAGCCAAACCATACACTC
GTAACCTGCATCTGATGGAACAACGGGGATTCCCATACAAGCAAATCGCACGGCATTGGAGAAAGAAACAGGAGGAGGCT
GTAAAAAAACTGGATGCGCTGGTTGTTCTGACACAACATGATGCGGATAATTGGAAAGAAGTGAAGAAGGCTTGTGTCAT
ACCGAACTTCTTACCTTTCTCACCCGAAAAAGGGAGTTCTTGCCTGGAGAAAAGAATCATCAGCATAGGAAGATACAGCG
AACAGAAGGGGTATGACCGCCTGATTGAAGCCTGGATCAAAGTCAATCGGAAGCATCCCGACTGGCATATCCGCATTTAC
GGAGAAGGACAGGATAGGAACAGCCTGCAAGAGCTTATTGAAAAGCATCATATAGAAAACAGTTTTTCACTATGCCCTCC
GACAAAAAGCATTCAAGAAAAATATCTGGAAAGTTCCATATACGTCATGAGTTCACGATTTGAAGGATTACCGATGGCAC
TTCTGGAAGCGATGGCATGTGGTGTTCCCTGCATTTCATTCGACTGCCCGTACGGACCTGCCGAGATTATCACTCCGGAA
GAAGACGGAATACTGGTGAAGAACGGAAACACGGACGAACTGGCTGACGCGATATGCCGGCTGATAGAGGATACGGACAA
ACGCATACGGATGGGAAAGCAGGCCCAAAAGAATATCCAACGTTATTCACGCGAAGAAGTGATGAAACTGTGGGATGAAC
TATTCAACACCTTAACAACTGCCCGACCATGA

Upstream 100 bases:

>100_bases
GAAAAGCTTTTGGCAAAAGAGCTAAACAAAATATAACACGCTACTCACTCCGAAACATCATGCCGCAATGGGAAATGTTG
TTTCATAAACTGACTGAAAA

Downstream 100 bases:

>100_bases
ATATCATCTACCTCCTTTTCCACGGACTATCCCCTTACAGCGGCATCAGTAAAAAGATCTTGCATCAGGTTAAAGGCTTT
GAAGCATGTGGACACCGGGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Stealth protein SCO2592 [H]

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTIVYLYTALCTVGGADRSIIQKANYLADEMHQDVFIITDSQKERPPVFPISPRIRHIDIGIDFDRQYHHNLLVRGYYYF
TLMHLYRKKLEYWLKTLKPDIVISTLGRELDFLTQLDDGSVKIGESHIAKPYTRNLHLMEQRGFPYKQIARHWRKKQEEA
VKKLDALVVLTQHDADNWKEVKKACVIPNFLPFSPEKGSSCLEKRIISIGRYSEQKGYDRLIEAWIKVNRKHPDWHIRIY
GEGQDRNSLQELIEKHHIENSFSLCPPTKSIQEKYLESSIYVMSSRFEGLPMALLEAMACGVPCISFDCPYGPAEIITPE
EDGILVKNGNTDELADAICRLIEDTDKRIRMGKQAQKNIQRYSREEVMKLWDELFNTLTTARP

Sequences:

>Translated_383_residues
MTIVYLYTALCTVGGADRSIIQKANYLADEMHQDVFIITDSQKERPPVFPISPRIRHIDIGIDFDRQYHHNLLVRGYYYF
TLMHLYRKKLEYWLKTLKPDIVISTLGRELDFLTQLDDGSVKIGESHIAKPYTRNLHLMEQRGFPYKQIARHWRKKQEEA
VKKLDALVVLTQHDADNWKEVKKACVIPNFLPFSPEKGSSCLEKRIISIGRYSEQKGYDRLIEAWIKVNRKHPDWHIRIY
GEGQDRNSLQELIEKHHIENSFSLCPPTKSIQEKYLESSIYVMSSRFEGLPMALLEAMACGVPCISFDCPYGPAEIITPE
EDGILVKNGNTDELADAICRLIEDTDKRIRMGKQAQKNIQRYSREEVMKLWDELFNTLTTARP
>Mature_382_residues
TIVYLYTALCTVGGADRSIIQKANYLADEMHQDVFIITDSQKERPPVFPISPRIRHIDIGIDFDRQYHHNLLVRGYYYFT
LMHLYRKKLEYWLKTLKPDIVISTLGRELDFLTQLDDGSVKIGESHIAKPYTRNLHLMEQRGFPYKQIARHWRKKQEEAV
KKLDALVVLTQHDADNWKEVKKACVIPNFLPFSPEKGSSCLEKRIISIGRYSEQKGYDRLIEAWIKVNRKHPDWHIRIYG
EGQDRNSLQELIEKHHIENSFSLCPPTKSIQEKYLESSIYVMSSRFEGLPMALLEAMACGVPCISFDCPYGPAEIITPEE
DGILVKNGNTDELADAICRLIEDTDKRIRMGKQAQKNIQRYSREEVMKLWDELFNTLTTARP

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the stealth family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=154, Percent_Identity=31.1688311688312, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44609; Mature: 44478

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVYLYTALCTVGGADRSIIQKANYLADEMHQDVFIITDSQKERPPVFPISPRIRHIDI
CEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEE
GIDFDRQYHHNLLVRGYYYFTLMHLYRKKLEYWLKTLKPDIVISTLGRELDFLTQLDDGS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
VKIGESHIAKPYTRNLHLMEQRGFPYKQIARHWRKKQEEAVKKLDALVVLTQHDADNWKE
EEECHHHCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
VKKACVIPNFLPFSPEKGSSCLEKRIISIGRYSEQKGYDRLIEAWIKVNRKHPDWHIRIY
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
GEGQDRNSLQELIEKHHIENSFSLCPPTKSIQEKYLESSIYVMSSRFEGLPMALLEAMAC
ECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GVPCISFDCPYGPAEIITPEEDGILVKNGNTDELADAICRLIEDTDKRIRMGKQAQKNIQ
CCCEEECCCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RYSREEVMKLWDELFNTLTTARP
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIVYLYTALCTVGGADRSIIQKANYLADEMHQDVFIITDSQKERPPVFPISPRIRHIDI
EEEEEEHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEE
GIDFDRQYHHNLLVRGYYYFTLMHLYRKKLEYWLKTLKPDIVISTLGRELDFLTQLDDGS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
VKIGESHIAKPYTRNLHLMEQRGFPYKQIARHWRKKQEEAVKKLDALVVLTQHDADNWKE
EEECHHHCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
VKKACVIPNFLPFSPEKGSSCLEKRIISIGRYSEQKGYDRLIEAWIKVNRKHPDWHIRIY
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
GEGQDRNSLQELIEKHHIENSFSLCPPTKSIQEKYLESSIYVMSSRFEGLPMALLEAMAC
ECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GVPCISFDCPYGPAEIITPEEDGILVKNGNTDELADAICRLIEDTDKRIRMGKQAQKNIQ
CCCEEECCCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RYSREEVMKLWDELFNTLTTARP
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]