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The map label for this gene is rfaB [C]

Identifier: 150006456

GI number: 150006456

Start: 4893337

End: 4894482

Strand: Direct

Name: rfaB [C]

Synonym: BVU_3975

Alternate gene names: 150006456

Gene position: 4893337-4894482 (Clockwise)

Preceding gene: 150006454

Following gene: 150006457

Centisome position: 94.77

GC content: 41.62

Gene sequence:

>1146_bases
ATGAAAATAGTATATGTATACGACTCCATAGCCCGTATAGGAGGCATGGAACGGATTTTAACGGATAAGATGAATTACTT
GGCCGAAATTTATGGGCACGAGGTCTATCTTATCACTTCTTCCCAAGGCAATCATCCTTTTTCTTTCCCGTTATCCCACA
AAGTGGAACATATCGATCTGGATACAAAGTTTCATTTGCAATACCAGCATCCGCTTCTGGAACAATTGAGAGTGGGATGG
ACTTTGAACCATAAATTCGAACAAAAATTTAAAAAAGAGATTAGGCTCATCAATCCCGATATCATATCAGGAAATACCAG
TTTCAAAGCGGATTTGATCTGTAAATTAGACTGCAAGGCAAAGAAAATCATAGAATCGCATTGCGCCAAAATATACACCC
GGATACCTGCAAACCGCAAAAAGAGTTTTTTTAAAGATATAAAAGACAGATACGTCAGCTACCAATGTTTCCGTGATGTA
AAACGATACAGCGATGCTATAGTCACACTGACACAAGGAGATGCCGCCATGTGGGGACAACATCCGAATATACATATCAT
TCCGAACACCACCTCTATTGATATACAAACAATCAGCTCCTGTGAGGCTCCCCGTGTAATAGCGGCAGGCAGACTGACCT
GGCAAAAAGGATTCGACAGACTGGTTGACGCATGGAATATCGTGCAGAAACGCCACCCCGACTGGATACTGGATATATTT
GGTGAAGGATTTTACAAGGATAGCTTAACCCGGCAGATTAAAGACAGAAAGCTGGAACACTCCATCACAATTCATCCTTT
TACACAAAACATAACGCAAGAATACCTGAACAGTTCCATTCTGGCCCTAAGCTCCAATTACGAAGGTTTTGGACTGGTCT
TGATCGAAGCCATGAGTCTGGGTGTTCCTTGTGTTTCTTTCGACTGTCCTTTCGGTCCATCGGAAATCATCAGAAACCAG
GAAGACGGACTCCTCGTCAAAAACGGAGATATACAAGGATTTGCCAACGCTCTTTGCCACTTGATAGAACATGAAGCAGA
AAGAAAAGCTTTTGGCAAAAGAGCTAAACAAAATATAACACGCTACTCACTCCGAAACATCATGCCGCAATGGGAAATGT
TGTTTCATAAACTGACTGAAAAATGA

Upstream 100 bases:

>100_bases
GACATTCCATAAAAAAACGGATATGGACAGGAATTTCAACAACTTCTTATTGGATATATAAAAAGAATACACTATTTTTA
CGGAAAAACAAACCAGGGGA

Downstream 100 bases:

>100_bases
CCATCGTTTATCTATACACAGCACTATGCACCGTGGGAGGCGCAGACCGGAGCATCATCCAAAAAGCGAACTATCTGGCT
GACGAAATGCATCAGGATGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Stealth protein SCO2592 [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKIVYVYDSIARIGGMERILTDKMNYLAEIYGHEVYLITSSQGNHPFSFPLSHKVEHIDLDTKFHLQYQHPLLEQLRVGW
TLNHKFEQKFKKEIRLINPDIISGNTSFKADLICKLDCKAKKIIESHCAKIYTRIPANRKKSFFKDIKDRYVSYQCFRDV
KRYSDAIVTLTQGDAAMWGQHPNIHIIPNTTSIDIQTISSCEAPRVIAAGRLTWQKGFDRLVDAWNIVQKRHPDWILDIF
GEGFYKDSLTRQIKDRKLEHSITIHPFTQNITQEYLNSSILALSSNYEGFGLVLIEAMSLGVPCVSFDCPFGPSEIIRNQ
EDGLLVKNGDIQGFANALCHLIEHEAERKAFGKRAKQNITRYSLRNIMPQWEMLFHKLTEK

Sequences:

>Translated_381_residues
MKIVYVYDSIARIGGMERILTDKMNYLAEIYGHEVYLITSSQGNHPFSFPLSHKVEHIDLDTKFHLQYQHPLLEQLRVGW
TLNHKFEQKFKKEIRLINPDIISGNTSFKADLICKLDCKAKKIIESHCAKIYTRIPANRKKSFFKDIKDRYVSYQCFRDV
KRYSDAIVTLTQGDAAMWGQHPNIHIIPNTTSIDIQTISSCEAPRVIAAGRLTWQKGFDRLVDAWNIVQKRHPDWILDIF
GEGFYKDSLTRQIKDRKLEHSITIHPFTQNITQEYLNSSILALSSNYEGFGLVLIEAMSLGVPCVSFDCPFGPSEIIRNQ
EDGLLVKNGDIQGFANALCHLIEHEAERKAFGKRAKQNITRYSLRNIMPQWEMLFHKLTEK
>Mature_381_residues
MKIVYVYDSIARIGGMERILTDKMNYLAEIYGHEVYLITSSQGNHPFSFPLSHKVEHIDLDTKFHLQYQHPLLEQLRVGW
TLNHKFEQKFKKEIRLINPDIISGNTSFKADLICKLDCKAKKIIESHCAKIYTRIPANRKKSFFKDIKDRYVSYQCFRDV
KRYSDAIVTLTQGDAAMWGQHPNIHIIPNTTSIDIQTISSCEAPRVIAAGRLTWQKGFDRLVDAWNIVQKRHPDWILDIF
GEGFYKDSLTRQIKDRKLEHSITIHPFTQNITQEYLNSSILALSSNYEGFGLVLIEAMSLGVPCVSFDCPFGPSEIIRNQ
EDGLLVKNGDIQGFANALCHLIEHEAERKAFGKRAKQNITRYSLRNIMPQWEMLFHKLTEK

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the stealth family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=360, Percent_Identity=26.1111111111111, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44079; Mature: 44079

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVYVYDSIARIGGMERILTDKMNYLAEIYGHEVYLITSSQGNHPFSFPLSHKVEHIDL
CEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEC
DTKFHLQYQHPLLEQLRVGWTLNHKFEQKFKKEIRLINPDIISGNTSFKADLICKLDCKA
CCEEEEEECCHHHHHHHCCCEECHHHHHHHHHHHEECCCCEECCCCCEEEEEEEEECCHH
KKIIESHCAKIYTRIPANRKKSFFKDIKDRYVSYQCFRDVKRYSDAIVTLTQGDAAMWGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCC
HPNIHIIPNTTSIDIQTISSCEAPRVIAAGRLTWQKGFDRLVDAWNIVQKRHPDWILDIF
CCCEEEECCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
GEGFYKDSLTRQIKDRKLEHSITIHPFTQNITQEYLNSSILALSSNYEGFGLVLIEAMSL
CCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHEEHHHC
GVPCVSFDCPFGPSEIIRNQEDGLLVKNGDIQGFANALCHLIEHEAERKAFGKRAKQNIT
CCCEEEECCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSLRNIMPQWEMLFHKLTEK
HHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIVYVYDSIARIGGMERILTDKMNYLAEIYGHEVYLITSSQGNHPFSFPLSHKVEHIDL
CEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEC
DTKFHLQYQHPLLEQLRVGWTLNHKFEQKFKKEIRLINPDIISGNTSFKADLICKLDCKA
CCEEEEEECCHHHHHHHCCCEECHHHHHHHHHHHEECCCCEECCCCCEEEEEEEEECCHH
KKIIESHCAKIYTRIPANRKKSFFKDIKDRYVSYQCFRDVKRYSDAIVTLTQGDAAMWGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCC
HPNIHIIPNTTSIDIQTISSCEAPRVIAAGRLTWQKGFDRLVDAWNIVQKRHPDWILDIF
CCCEEEECCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
GEGFYKDSLTRQIKDRKLEHSITIHPFTQNITQEYLNSSILALSSNYEGFGLVLIEAMSL
CCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHEEHHHC
GVPCVSFDCPFGPSEIIRNQEDGLLVKNGDIQGFANALCHLIEHEAERKAFGKRAKQNIT
CCCEEEECCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYSLRNIMPQWEMLFHKLTEK
HHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]