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The map label for this gene is yibD [C]

Identifier: 150006454

GI number: 150006454

Start: 4891112

End: 4892062

Strand: Direct

Name: yibD [C]

Synonym: BVU_3973

Alternate gene names: 150006454

Gene position: 4891112-4892062 (Clockwise)

Preceding gene: 150006447

Following gene: 150006456

Centisome position: 94.73

GC content: 42.8

Gene sequence:

>951_bases
ATGACAAAGAACACAAGTTACCATTACAGCATCATTATTCCGCACAAGAATACCCCCCGTCTTCTGGAACGCTGTCTGTG
CTCAATTCCCACTTGGGATGAAATTCAAATCATTATCATTGATGACAACAGCAATTCCGAATCTGTCGATTTTTCTCATT
TTCCGGGAAACGGCAGAAAAAATACGGAAGTCCTGTTCACTAAGGAGGGAAAAGGGGCAGGATACGCACGGAACATAGGG
CTCTCCCACGCCCGTGGCAAATGGATTATCTTTGCAGATGCAGACGATTTCTTTACAGCCGATTGTTTTACTATCTTAAA
CGAATACATGGACAGCCCCCATGAAGTCATCTATTTCAATGTACGTTTTGTCATGTCCGACAATCCGTCCCAAGAAAGCC
GACGCGGAACTTACTATACCAACTTCTTCAATGATGTAAACCCGGAAAACAAACTGCGATACCAATCTCAAGTTCCTTGG
GGCAAAATGATAAGGCGCAGCTTCCTGTCAACATTCCACATTCAATTCGATGAAACAAGAATAGCCAACGATGTGTATTT
TTCATGCCTTGTCGGTATATATGCCCCCAAAGCAACCACAGACAGAAGAATCATTTATTATTGTACCGAATCCGGCCAGT
CCCTTGCTATGTCCAAACAAGACCGCGAGAGTTTAATCATACGGTTTAACGCAAGCATGAAATGCAACAGACTGTTGCGA
CAAGAAAAAATCCACTATTACCTGTCACCACTTCCGTGGTGTATCCCTTCGGCAAAAACAAAAGAATGGCTCCCCGCCAA
ATACTTTTTTGAATACCTGTTTTTCTTCCGCCTGCAAGCATTCAAAGAATTATATTATGCTTTTTCCGCTATCCTGTCAC
ATATGAATGAGCCGGCCACAAAAGAAACCGACAACCAATGTAACAAGAAGACTACCAACCTAAGGGAATAA

Upstream 100 bases:

>100_bases
ACCCCGAATTTCCAGTGAAAGATTCTCATACTCATCGAGATATTATCAAGATAATGCATGATGCTGAATATAAATCAATA
TCTTTGCAAAAAGAAGAAGA

Downstream 100 bases:

>100_bases
TATTCATTACACAAGAAGATTCAACGGTACAACCTTCCCCATATCTTATAATACAATTTGATCAGATTAGCGTATTTATA
CAATATGTGATGTCTGTAAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTKNTSYHYSIIIPHKNTPRLLERCLCSIPTWDEIQIIIIDDNSNSESVDFSHFPGNGRKNTEVLFTKEGKGAGYARNIG
LSHARGKWIIFADADDFFTADCFTILNEYMDSPHEVIYFNVRFVMSDNPSQESRRGTYYTNFFNDVNPENKLRYQSQVPW
GKMIRRSFLSTFHIQFDETRIANDVYFSCLVGIYAPKATTDRRIIYYCTESGQSLAMSKQDRESLIIRFNASMKCNRLLR
QEKIHYYLSPLPWCIPSAKTKEWLPAKYFFEYLFFFRLQAFKELYYAFSAILSHMNEPATKETDNQCNKKTTNLRE

Sequences:

>Translated_316_residues
MTKNTSYHYSIIIPHKNTPRLLERCLCSIPTWDEIQIIIIDDNSNSESVDFSHFPGNGRKNTEVLFTKEGKGAGYARNIG
LSHARGKWIIFADADDFFTADCFTILNEYMDSPHEVIYFNVRFVMSDNPSQESRRGTYYTNFFNDVNPENKLRYQSQVPW
GKMIRRSFLSTFHIQFDETRIANDVYFSCLVGIYAPKATTDRRIIYYCTESGQSLAMSKQDRESLIIRFNASMKCNRLLR
QEKIHYYLSPLPWCIPSAKTKEWLPAKYFFEYLFFFRLQAFKELYYAFSAILSHMNEPATKETDNQCNKKTTNLRE
>Mature_315_residues
TKNTSYHYSIIIPHKNTPRLLERCLCSIPTWDEIQIIIIDDNSNSESVDFSHFPGNGRKNTEVLFTKEGKGAGYARNIGL
SHARGKWIIFADADDFFTADCFTILNEYMDSPHEVIYFNVRFVMSDNPSQESRRGTYYTNFFNDVNPENKLRYQSQVPWG
KMIRRSFLSTFHIQFDETRIANDVYFSCLVGIYAPKATTDRRIIYYCTESGQSLAMSKQDRESLIIRFNASMKCNRLLRQ
EKIHYYLSPLPWCIPSAKTKEWLPAKYFFEYLFFFRLQAFKELYYAFSAILSHMNEPATKETDNQCNKKTTNLRE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37135; Mature: 37004

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNTSYHYSIIIPHKNTPRLLERCLCSIPTWDEIQIIIIDDNSNSESVDFSHFPGNGRK
CCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC
NTEVLFTKEGKGAGYARNIGLSHARGKWIIFADADDFFTADCFTILNEYMDSPHEVIYFN
CCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
VRFVMSDNPSQESRRGTYYTNFFNDVNPENKLRYQSQVPWGKMIRRSFLSTFHIQFDETR
EEEEECCCCCCHHCCCCEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHEEEEECCHH
IANDVYFSCLVGIYAPKATTDRRIIYYCTESGQSLAMSKQDRESLIIRFNASMKCNRLLR
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCEEEEEECCCHHHHHHHH
QEKIHYYLSPLPWCIPSAKTKEWLPAKYFFEYLFFFRLQAFKELYYAFSAILSHMNEPAT
HHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KETDNQCNKKTTNLRE
CCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TKNTSYHYSIIIPHKNTPRLLERCLCSIPTWDEIQIIIIDDNSNSESVDFSHFPGNGRK
CCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC
NTEVLFTKEGKGAGYARNIGLSHARGKWIIFADADDFFTADCFTILNEYMDSPHEVIYFN
CCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
VRFVMSDNPSQESRRGTYYTNFFNDVNPENKLRYQSQVPWGKMIRRSFLSTFHIQFDETR
EEEEECCCCCCHHCCCCEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHEEEEECCHH
IANDVYFSCLVGIYAPKATTDRRIIYYCTESGQSLAMSKQDRESLIIRFNASMKCNRLLR
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCEEEEEECCCHHHHHHHH
QEKIHYYLSPLPWCIPSAKTKEWLPAKYFFEYLFFFRLQAFKELYYAFSAILSHMNEPAT
HHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KETDNQCNKKTTNLRE
CCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA