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The map label for this gene is rfbA [H]

Identifier: 150006451

GI number: 150006451

Start: 4888468

End: 4889331

Strand: Reverse

Name: rfbA [H]

Synonym: BVU_3970

Alternate gene names: 150006451

Gene position: 4889331-4888468 (Counterclockwise)

Preceding gene: 150006452

Following gene: 150006450

Centisome position: 94.7

GC content: 43.98

Gene sequence:

>864_bases
ATGGTACAAGATGAACAGGAAAAATGGGATATTGTGATCAAGCCTCGGTCCGGTTTGTTCCGGTTGGATCTGGAAGAGGT
ATGGCTGTATAGGGATTTGCTGGTAATGTATATCAGACGGGATATCGTCACTTTTTATAAACAGACTGTTTTAGGACCGT
TATGGTTTGTTATCCAGCCACTGCTTACTACCGTCATGTTCATGTTTGTTTTTGGCGGTATTGCCGGTATTCCTACCGAC
GGACTTCCCCAACCGCTGTTTTATATGGCGGGCTTACTTTGCTGGAATTATTTCTCGGAGTGTTTAAGCCGCTGTTCGGA
TACGTTCAACGCCAATCAGAATGTATTTGGAAAAGTATATTTCCCTCGTCTGGTGGTACCCTTGTCCATCGTTATATCTT
GCATGATAAAGATGGGCATTCAGTTCGGATTGTTCGTTTTAATTTATATTTACTATTTGTGCAACGGATATTCGTTGATG
GTCAACGGATATGCTTGGTTGGCTCCCTTGCTGCTGCTCATGTTGGCAGGACTTGGTTTGGGGTTCGGATTATTGATATC
CTCCTTGACGACCAAGTACCGTGACTTGCGTTTCTTGATTACTTTCGGGGTACAGTTGTGGATGTATGCCACTCCGGTTA
TTTACCCTTTGTCCGTGATGAGGCAGAGTCATGAGCAGTATATGTGGATCATTGTGGCGAACCCGCTGACTTCCCTTATC
GAAACATTTAAATTCGGATTCTTGGGGGTGGGGACTTTCAGTTGGTTCCACTTAGGCTACACGTTGGTGTTTACAGTGGT
GATAATGCTTTGGGGGATGGTGACTTTTAATAGAGTGCAACGTAGTTTCATGGATGTGATTTAA

Upstream 100 bases:

>100_bases
GATTGGGAATGGATGGGAAATAAGGCGGTGGAGTATGCTGATACATTTCATATAGAGAAGGTATGTGACAGTTGGAATAA
TTTACTAAAAAAAGTAGTGT

Downstream 100 bases:

>100_bases
AAGAAGGGACAGAATGGGAAAAATAGCGATAGAGTTTCAGAATATCAGCAAGCAATATGCATTGGGAAGCATCGGAACCG
GCACGCTGAGCCGTGATTTG

Product: ABC-type polysaccharide/polyol phosphate export system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MVQDEQEKWDIVIKPRSGLFRLDLEEVWLYRDLLVMYIRRDIVTFYKQTVLGPLWFVIQPLLTTVMFMFVFGGIAGIPTD
GLPQPLFYMAGLLCWNYFSECLSRCSDTFNANQNVFGKVYFPRLVVPLSIVISCMIKMGIQFGLFVLIYIYYLCNGYSLM
VNGYAWLAPLLLLMLAGLGLGFGLLISSLTTKYRDLRFLITFGVQLWMYATPVIYPLSVMRQSHEQYMWIIVANPLTSLI
ETFKFGFLGVGTFSWFHLGYTLVFTVVIMLWGMVTFNRVQRSFMDVI

Sequences:

>Translated_287_residues
MVQDEQEKWDIVIKPRSGLFRLDLEEVWLYRDLLVMYIRRDIVTFYKQTVLGPLWFVIQPLLTTVMFMFVFGGIAGIPTD
GLPQPLFYMAGLLCWNYFSECLSRCSDTFNANQNVFGKVYFPRLVVPLSIVISCMIKMGIQFGLFVLIYIYYLCNGYSLM
VNGYAWLAPLLLLMLAGLGLGFGLLISSLTTKYRDLRFLITFGVQLWMYATPVIYPLSVMRQSHEQYMWIIVANPLTSLI
ETFKFGFLGVGTFSWFHLGYTLVFTVVIMLWGMVTFNRVQRSFMDVI
>Mature_287_residues
MVQDEQEKWDIVIKPRSGLFRLDLEEVWLYRDLLVMYIRRDIVTFYKQTVLGPLWFVIQPLLTTVMFMFVFGGIAGIPTD
GLPQPLFYMAGLLCWNYFSECLSRCSDTFNANQNVFGKVYFPRLVVPLSIVISCMIKMGIQFGLFVLIYIYYLCNGYSLM
VNGYAWLAPLLLLMLAGLGLGFGLLISSLTTKYRDLRFLITFGVQLWMYATPVIYPLSVMRQSHEQYMWIIVANPLTSLI
ETFKFGFLGVGTFSWFHLGYTLVFTVVIMLWGMVTFNRVQRSFMDVI

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 33260; Mature: 33260

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQDEQEKWDIVIKPRSGLFRLDLEEVWLYRDLLVMYIRRDIVTFYKQTVLGPLWFVIQP
CCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTTVMFMFVFGGIAGIPTDGLPQPLFYMAGLLCWNYFSECLSRCSDTFNANQNVFGKVY
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FPRLVVPLSIVISCMIKMGIQFGLFVLIYIYYLCNGYSLMVNGYAWLAPLLLLMLAGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH
GFGLLISSLTTKYRDLRFLITFGVQLWMYATPVIYPLSVMRQSHEQYMWIIVANPLTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
ETFKFGFLGVGTFSWFHLGYTLVFTVVIMLWGMVTFNRVQRSFMDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVQDEQEKWDIVIKPRSGLFRLDLEEVWLYRDLLVMYIRRDIVTFYKQTVLGPLWFVIQP
CCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTTVMFMFVFGGIAGIPTDGLPQPLFYMAGLLCWNYFSECLSRCSDTFNANQNVFGKVY
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FPRLVVPLSIVISCMIKMGIQFGLFVLIYIYYLCNGYSLMVNGYAWLAPLLLLMLAGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH
GFGLLISSLTTKYRDLRFLITFGVQLWMYATPVIYPLSVMRQSHEQYMWIIVANPLTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
ETFKFGFLGVGTFSWFHLGYTLVFTVVIMLWGMVTFNRVQRSFMDVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7533882 [H]