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The map label for this gene is rfaB [C]

Identifier: 150006452

GI number: 150006452

Start: 4889318

End: 4890499

Strand: Reverse

Name: rfaB [C]

Synonym: BVU_3971

Alternate gene names: 150006452

Gene position: 4890499-4889318 (Counterclockwise)

Preceding gene: 150006453

Following gene: 150006451

Centisome position: 94.72

GC content: 43.57

Gene sequence:

>1182_bases
ATGAGAATATTATTTTATTGTGATACTGTCTTCAGTTTCGGCGGAGTACAGCGTGTGTTGGCTGAAATAGCCAAGGCTTT
GTCCGGAAAACATGAAGTCACGATACTGACCACGGATACTTGTACGGACTTGTCGATGTACGGATATGCCGAAAGTACCG
TGCGGTTTGATTCTTTCTCTTATTCCGCCTCCTCTTTCATCGAGCGTTTGTTATGTAAAGGCTATAGTTTTTTATATAAA
CATGGGTTGCCTCATACCCGGCTGACTTCAGAATGGTATGCTGCCAGTTTTTTCCCTTCTTCTTATAAACGGACATTGGC
AAGGAAAATAAATGCCCGGCAATGTGATGTAGTCATCGGGGTACATGCTTTTATGGCTCTGCACCTCTCTGCAGTAAAGA
GTCGGATCCGGACAAAGACTGTTGGGTGGCTGCATAATTCTTATGAAGCATTCTTTGAGAAAGAAACTCCCTATTTGCCG
GGATTGGATTGCTTTTTTCAAGTCCAGATGGGGAAATTGGACGAGAGGGTGGTTTTAAGTCATGCAGATGCCGGTTGTTT
CTTTCGGAAAATGAACCTGTGCTGCGAGGTGATATACAATCCTCTGACTGTACTGCCTAAAGGTCGGGGAAAGAAGGAAT
ATAGAAGGATTTTGGCGGTCGGTCGTTTTTCATTCGGACATAAAGGATTTGATATTTTAATAAAAGCTTTTTCTGTTTTT
GTGAAAACTCATCCGGACTGGACACTGGAAATTGTGGGGGAGGGTCCTGAGGAAGCGCTTTACCGTTCATTGATCAATGA
ATATGAATTGGAAAAGAGCATCGCGCTGCATCCTTTCACGAAAGAGGTGCAGGAGTATTATGCACATTCCAGTATGTATG
TGCTGAGTTCCCGTTGGGAGGGATTCGGCCTGGTGATGATAGAGGCTATGGCGCACGGGTTACCTGTTATTGCATCTGAT
TTACCGATAACGCGCGAGTTGTTGAAAGACAAAGATATGGCCGTTCTTTTTGAAACAGGGAATATAGCTCAGCTGGCCGG
TTGTATGTCGTATATGGCTGATCGGACGGATTGGGAATGGATGGGAAATAAGGCGGTGGAGTATGCTGATACATTTCATA
TAGAGAAGGTATGTGACAGTTGGAATAATTTACTAAAAAAAGTAGTGTATGGTACAAGATGA

Upstream 100 bases:

>100_bases
CAGATACCTGCTTTGTATTATATGATATTCTTTCTTCATTCCGCATTTATTTTCATTTCTTTATTGTATCTTTGCGAAGA
AAGAGTGTAATCTAAATTCC

Downstream 100 bases:

>100_bases
ACAGGAAAAATGGGATATTGTGATCAAGCCTCGGTCCGGTTTGTTCCGGTTGGATCTGGAAGAGGTATGGCTGTATAGGG
ATTTGCTGGTAATGTATATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MRILFYCDTVFSFGGVQRVLAEIAKALSGKHEVTILTTDTCTDLSMYGYAESTVRFDSFSYSASSFIERLLCKGYSFLYK
HGLPHTRLTSEWYAASFFPSSYKRTLARKINARQCDVVIGVHAFMALHLSAVKSRIRTKTVGWLHNSYEAFFEKETPYLP
GLDCFFQVQMGKLDERVVLSHADAGCFFRKMNLCCEVIYNPLTVLPKGRGKKEYRRILAVGRFSFGHKGFDILIKAFSVF
VKTHPDWTLEIVGEGPEEALYRSLINEYELEKSIALHPFTKEVQEYYAHSSMYVLSSRWEGFGLVMIEAMAHGLPVIASD
LPITRELLKDKDMAVLFETGNIAQLAGCMSYMADRTDWEWMGNKAVEYADTFHIEKVCDSWNNLLKKVVYGTR

Sequences:

>Translated_393_residues
MRILFYCDTVFSFGGVQRVLAEIAKALSGKHEVTILTTDTCTDLSMYGYAESTVRFDSFSYSASSFIERLLCKGYSFLYK
HGLPHTRLTSEWYAASFFPSSYKRTLARKINARQCDVVIGVHAFMALHLSAVKSRIRTKTVGWLHNSYEAFFEKETPYLP
GLDCFFQVQMGKLDERVVLSHADAGCFFRKMNLCCEVIYNPLTVLPKGRGKKEYRRILAVGRFSFGHKGFDILIKAFSVF
VKTHPDWTLEIVGEGPEEALYRSLINEYELEKSIALHPFTKEVQEYYAHSSMYVLSSRWEGFGLVMIEAMAHGLPVIASD
LPITRELLKDKDMAVLFETGNIAQLAGCMSYMADRTDWEWMGNKAVEYADTFHIEKVCDSWNNLLKKVVYGTR
>Mature_393_residues
MRILFYCDTVFSFGGVQRVLAEIAKALSGKHEVTILTTDTCTDLSMYGYAESTVRFDSFSYSASSFIERLLCKGYSFLYK
HGLPHTRLTSEWYAASFFPSSYKRTLARKINARQCDVVIGVHAFMALHLSAVKSRIRTKTVGWLHNSYEAFFEKETPYLP
GLDCFFQVQMGKLDERVVLSHADAGCFFRKMNLCCEVIYNPLTVLPKGRGKKEYRRILAVGRFSFGHKGFDILIKAFSVF
VKTHPDWTLEIVGEGPEEALYRSLINEYELEKSIALHPFTKEVQEYYAHSSMYVLSSRWEGFGLVMIEAMAHGLPVIASD
LPITRELLKDKDMAVLFETGNIAQLAGCMSYMADRTDWEWMGNKAVEYADTFHIEKVCDSWNNLLKKVVYGTR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44907; Mature: 44907

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFYCDTVFSFGGVQRVLAEIAKALSGKHEVTILTTDTCTDLSMYGYAESTVRFDSFS
CEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCEEEECCCC
YSASSFIERLLCKGYSFLYKHGLPHTRLTSEWYAASFFPSSYKRTLARKINARQCDVVIG
CCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEHH
VHAFMALHLSAVKSRIRTKTVGWLHNSYEAFFEKETPYLPGLDCFFQVQMGKLDERVVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEEE
HADAGCFFRKMNLCCEVIYNPLTVLPKGRGKKEYRRILAVGRFSFGHKGFDILIKAFSVF
CCCCHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VKTHPDWTLEIVGEGPEEALYRSLINEYELEKSIALHPFTKEVQEYYAHSSMYVLSSRWE
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC
GFGLVMIEAMAHGLPVIASDLPITRELLKDKDMAVLFETGNIAQLAGCMSYMADRTDWEW
CCHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHH
MGNKAVEYADTFHIEKVCDSWNNLLKKVVYGTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRILFYCDTVFSFGGVQRVLAEIAKALSGKHEVTILTTDTCTDLSMYGYAESTVRFDSFS
CEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCEEEECCCC
YSASSFIERLLCKGYSFLYKHGLPHTRLTSEWYAASFFPSSYKRTLARKINARQCDVVIG
CCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEHH
VHAFMALHLSAVKSRIRTKTVGWLHNSYEAFFEKETPYLPGLDCFFQVQMGKLDERVVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEEE
HADAGCFFRKMNLCCEVIYNPLTVLPKGRGKKEYRRILAVGRFSFGHKGFDILIKAFSVF
CCCCHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VKTHPDWTLEIVGEGPEEALYRSLINEYELEKSIALHPFTKEVQEYYAHSSMYVLSSRWE
HHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC
GFGLVMIEAMAHGLPVIASDLPITRELLKDKDMAVLFETGNIAQLAGCMSYMADRTDWEW
CCHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHH
MGNKAVEYADTFHIEKVCDSWNNLLKKVVYGTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]