| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is hisA
Identifier: 150006333
GI number: 150006333
Start: 4752966
End: 4753685
Strand: Direct
Name: hisA
Synonym: BVU_3852
Alternate gene names: 150006333
Gene position: 4752966-4753685 (Clockwise)
Preceding gene: 150006332
Following gene: 150006334
Centisome position: 92.05
GC content: 43.89
Gene sequence:
>720_bases ATGATAGAGTTAATTCCTGCCATCGACATTATTGATGGCAAATGCGTCCGTCTTTCTCAAGGAGATTATAACACACAGAA AGTATATAACGAAAACCCGGTTGAGGTTGCCAAAGAATTTGAAGCCCATGGGATTCATCGTCTGCACATTGTCGATCTGG ATGGAGCAGTTTCACGCCATGTTGTGAATTACCGTGTACTAGACCAAATCGCCAGCCGCACTTCTCTGGTCATTGATTTT GGAGGAGGGATAAAAACAGACGAGGACCTAGTCATCGCTTTCGACAATGGCGCACAAATGGTAACCCTGGGCAGCGTAGC CGTGAAAAATCCCGGGCTTTTCAAAAAATGGCTGGAACAATACGGAAACGAGAAAATCATTCTGGGAGCTGATGTAAAGG AGAATAAAATTTCTGTCAATGGCTGGAAAGAGGAAAGTCAGCAGCAGTTGATCCCTTTTTTGAAAGATTATACTAAAGAA GGGGTTTTCAAGGTGTTATGTACCGACATCAGCCGTGACGGAATGTTGCAAGGACCTTCCGTGGAACTATACCAGCAAAT CCTGAAGGAGTTCCCGAATATGCATCTGATAGCCAGCGGAGGAGTAAGCTGTATACAGGACATTATCGACCTGGAAATAG CCAAAGTTCCGGCTGTTGTTTTCGGCAAGGCATTATACGAGGGAAAAATTACATTGAAAGACTTAAACCGTTTCATGTAA
Upstream 100 bases:
>100_bases ATCCCGAAAAGAGCGGAGCCGTGGGCGAACGAATCCTGAGGAACTTTTTAGAATTGTGAACCATTACATTATATATAACA ATGTATAAGAAGAAATAGAT
Downstream 100 bases:
>100_bases AAGCAAATCATGTTAGCAAAAAGAATCATACCTTGCCTGGACATCAAAGACGGGCAGACCGTAAAAGGAACCAATTTCGT AAACTTACGTCAAGCAGGTG
Product: imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MIELIPAIDIIDGKCVRLSQGDYNTQKVYNENPVEVAKEFEAHGIHRLHIVDLDGAVSRHVVNYRVLDQIASRTSLVIDF GGGIKTDEDLVIAFDNGAQMVTLGSVAVKNPGLFKKWLEQYGNEKIILGADVKENKISVNGWKEESQQQLIPFLKDYTKE GVFKVLCTDISRDGMLQGPSVELYQQILKEFPNMHLIASGGVSCIQDIIDLEIAKVPAVVFGKALYEGKITLKDLNRFM
Sequences:
>Translated_239_residues MIELIPAIDIIDGKCVRLSQGDYNTQKVYNENPVEVAKEFEAHGIHRLHIVDLDGAVSRHVVNYRVLDQIASRTSLVIDF GGGIKTDEDLVIAFDNGAQMVTLGSVAVKNPGLFKKWLEQYGNEKIILGADVKENKISVNGWKEESQQQLIPFLKDYTKE GVFKVLCTDISRDGMLQGPSVELYQQILKEFPNMHLIASGGVSCIQDIIDLEIAKVPAVVFGKALYEGKITLKDLNRFM >Mature_239_residues MIELIPAIDIIDGKCVRLSQGDYNTQKVYNENPVEVAKEFEAHGIHRLHIVDLDGAVSRHVVNYRVLDQIASRTSLVIDF GGGIKTDEDLVIAFDNGAQMVTLGSVAVKNPGLFKKWLEQYGNEKIILGADVKENKISVNGWKEESQQQLIPFLKDYTKE GVFKVLCTDISRDGMLQGPSVELYQQILKEFPNMHLIASGGVSCIQDIIDLEIAKVPAVVFGKALYEGKITLKDLNRFM
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=236, Percent_Identity=36.0169491525424, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1788336, Length=248, Percent_Identity=21.3709677419355, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_BACV8 (A6L6Z1)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001301077.1 - STRING: A6L6Z1 - GeneID: 5304811 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_3852 - NMPDR: fig|435590.6.peg.3569 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: CLSK822682 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26635; Mature: 26635
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: ACT_SITE 9-9 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELIPAIDIIDGKCVRLSQGDYNTQKVYNENPVEVAKEFEAHGIHRLHIVDLDGAVSRH CEEEECCEEECCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCHHHHH VVNYRVLDQIASRTSLVIDFGGGIKTDEDLVIAFDNGAQMVTLGSVAVKNPGLFKKWLEQ HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCCCHHHHHHHH YGNEKIILGADVKENKISVNGWKEESQQQLIPFLKDYTKEGVFKVLCTDISRDGMLQGPS HCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCC VELYQQILKEFPNMHLIASGGVSCIQDIIDLEIAKVPAVVFGKALYEGKITLKDLNRFM HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHCC >Mature Secondary Structure MIELIPAIDIIDGKCVRLSQGDYNTQKVYNENPVEVAKEFEAHGIHRLHIVDLDGAVSRH CEEEECCEEECCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCHHHHH VVNYRVLDQIASRTSLVIDFGGGIKTDEDLVIAFDNGAQMVTLGSVAVKNPGLFKKWLEQ HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCCCHHHHHHHH YGNEKIILGADVKENKISVNGWKEESQQQLIPFLKDYTKEGVFKVLCTDISRDGMLQGPS HCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCC VELYQQILKEFPNMHLIASGGVSCIQDIIDLEIAKVPAVVFGKALYEGKITLKDLNRFM HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA