| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006048
Identifier: 150006048
GI number: 150006048
Start: 4405069
End: 4406427
Strand: Reverse
Name: 150006048
Synonym: BVU_3552
Alternate gene names: NA
Gene position: 4406427-4405069 (Counterclockwise)
Preceding gene: 150006049
Following gene: 150006045
Centisome position: 85.34
GC content: 46.28
Gene sequence:
>1359_bases ATGGCAAAGATAGTGAATATTTCAGAAATTCACCCTACTTTGGGTTTTACAGAATTTGATATTCTGGAAAAATACCGCAA GAGTTTTAATGAGAGTGAGCTTGGCAAGCTTCATTCGGTCTTTCCGTTTGAATGTATGGCAAAAGCCGCCGGCCTGTCGG ACCGGCGCCTGGGACGCAGGAACAGATTCAGTCCTTCCGCAAAGATCGCCCTTATGGTCCTGAAGGCATACACCGGATTC TCCGACAGGCAACTGGTGGAACATCTGAACGGGAACATACACTACCAGATTTTCTGTGGAATTATGATTCCCCCGTCCCT TCCCATAACCAACTTCAAGATAGTCAGTGCCATCCGTAATGAGATAGCATCCCGCCTTGACATTGATTCTTTCCAGGAGC TCCTGGCTTCACACTGGAAACCTTATCTTGATAACCTTCACGTCTGCATGACCGATGCCACATGCTATGAAAGCCACATG CGTTTTCCTACGGACATGAAACTCCTTTGGGAAAGCCTCGAATGGCTCTACAGGCATATATGCCGGCATTGCAGGGAGCT GGGCATAAGGCGTCCGCGCAACAAATACAGGAATGTGGCGGAATCCTATCTGTCCTACTGCAAGAAAAGAAAGAGGAGAG CTTCAAGGGCAAGAATGCTTAAGCGCCGTATGATCAAGCTTCTTGAAAAGCTCCTCAGTCAAAGGGATGGGATCCATAGC GAGTACGGTGCTTTACTCCGATATACCCAGGATTATCATAAGCGTCTTTCCATCATCAGAAAGGTGCTTGTACAAGAAAA GGAAATGTTTGAAGGGCGGAAAGTCAGTGACCGCATCGTCAGCATTGACCGTCATTATGTACGTCCCATCGTCAGAGGCA AGGAAACCAAGTCCGTCGAGTTCGGTGCAAAGGTCAATAATATACAGATAGACGGCATATCGTTCATCGAACACCTCTCG TTCAAGGCATTCAATGAGGGTATACGCTTGAAGGACTGTATCCGCATGCAGCAGAAGCTTATGAATGTAAGGGTAAGATG TGTGGCTGCCGATTCCATATATGCCAATAATGCCAACAGAAAGTTCTGTACAAAATATGGGATATCCACATCCTTTGTGC GCAAGGGAAGGGCGGCCAAAGATGAGCCTTTGAGGAAGGTGCTTAGAAGCGAACTCTCAAAAGAAAGGGCAACACGGCTT GAAGGAAGCTTCGGCACTCAAAAGCAACATTACTCGCTCTCAAGGATAAAGGCCAGAAACAGGAAGACGGAAATACTGTG GATTTTCTTTGGAATACATACGGCAAATGCCATACTGATAATAGAAAAAATCAGAAACAAAACAGCTAAAGCAGCATGA
Upstream 100 bases:
>100_bases CAAAGTATTGCGAATTAGTTGGCTTTTTTGTATCTTTAGGTATTCCCCCGAAAATAAGATTTGACGGCCAAAACGGGGGA AATATCCAAACTAATAAGAT
Downstream 100 bases:
>100_bases TATGATTTTACTCACAGAATCAGAAGAGGTCATCAGACTTCTTCCGGAACGTCATGTCCTGTCGGATAGAATTATGTGAG AAAGCACGGAAAAATGACAA
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase IS5 Family; IS5 Family Transposase; Transposase IS5 Family Protein
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGF SDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHM RFPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLS FKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRL EGSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA
Sequences:
>Translated_452_residues MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGF SDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHM RFPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLS FKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRL EGSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA >Mature_451_residues AKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGFS DRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMR FPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHSE YGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLSF KAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLE GSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52857; Mature: 52725
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRR CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHCCCC NRFSPSAKIALMVLKAYTGFSDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRN CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHH EIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMRFPTDMKLLWESLEWLYRHI HHHHHCCHHHHHHHHHHHCCHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHH CRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE FGAKVNNIQIDGISFIEHLSFKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANR CCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHEECCCCC KFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLEGSFGTQKQHYSLSRIKARN HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC RKTEILWIFFGIHTANAILIIEKIRNKTAKAA CCCEEEEEEEEHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRR CCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHCCCC NRFSPSAKIALMVLKAYTGFSDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRN CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHH EIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMRFPTDMKLLWESLEWLYRHI HHHHHCCHHHHHHHHHHHCCHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHH CRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE FGAKVNNIQIDGISFIEHLSFKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANR CCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHEECCCCC KFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLEGSFGTQKQHYSLSRIKARN HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC RKTEILWIFFGIHTANAILIIEKIRNKTAKAA CCCEEEEEEEEHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA