| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006002
Identifier: 150006002
GI number: 150006002
Start: 4353377
End: 4354240
Strand: Reverse
Name: 150006002
Synonym: BVU_3500
Alternate gene names: NA
Gene position: 4354240-4353377 (Counterclockwise)
Preceding gene: 150006003
Following gene: 150006001
Centisome position: 84.33
GC content: 48.03
Gene sequence:
>864_bases ATGAATAAATATCTCAGTTTCATCTTTGCTTCAGTGCTCACACTCACGGGCGTACAGCTTTCCAAAGCCAGCAATCCATC GGATTCCCTGGCCATCGTATCGGCCAAATGGGAGAGAACATCTTCACTGCAAGGCATCCAGTTGAAACAAGCTTCGATAG AAGGCCTGTTTGGAGGCAAGCAATCCATCAGCATCCTGACCATTGGAAGAGCGGAAGGCTATACAGCCTTTATTGCTACG ACGGACTCGCTGACCACCACTAGCCAATTGGCTGAACAAAGCCGTTCTTCTGCAGCCATAAACGGGTCGTACTTCAGTAT CAAGGAAGGCTTCTCTACCTGTTACCTCCGTAAAAATGAAGCGGTAATAGATACGACAACTACCGAAGAAAGGCATTTGC GTGTCAATGGTGCCGTACACATGGTGGATAACAATATCCGGATCATACCATGGAACGACGAAAATGAGAAGAAAGGGTTC CCGCTGGATGGGGATATACTTGCGTCCGGACCGCTCTTGATGCAGGACGGCAAGACGTGTGACTTCACGACGATAGATCG GGAATTCTCAGAGACCAGACATCCCAGAAGTGCCATTGCACTCACAAAAGAAGGTGACATAATGCTGGTAGCGGTAGATG GAAGGGCAGAAGGGCACGCAGATGGAATGTCCATTGCAGAACTTGCCTATCTTTTGCGAATTCTGAAGGCACATTGCGCA CTTAATCTGGATGGAGGCGGTTCTACCACCTTATGGGTGAATGGTCAAGTGGTCAACCACCCAAGCGACAACAAGAAATT CGACAACAAAGGAGAAAGAAAAGTCCACAACATCATAGCCGTTCGAAGATTGACAAATCCATAG
Upstream 100 bases:
>100_bases GTAGGAGGGGTCGTGAACCATCCGACTGACAACAAGAAATTCGACCATGCGGGACAACGCAGAGTAACCTCGTTCATTGT CATCAAATCATCTGAAAACC
Downstream 100 bases:
>100_bases AGTACAACATGCTTGCTCACAGACAAATCGGGGAGTACTGCATCAATCATGCAGGAACAGTCTGAACAGGGAGGCCCTCG AATGGCTTGAAAGGACGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNKYLSFIFASVLTLTGVQLSKASNPSDSLAIVSAKWERTSSLQGIQLKQASIEGLFGGKQSISILTIGRAEGYTAFIAT TDSLTTTSQLAEQSRSSAAINGSYFSIKEGFSTCYLRKNEAVIDTTTTEERHLRVNGAVHMVDNNIRIIPWNDENEKKGF PLDGDILASGPLLMQDGKTCDFTTIDREFSETRHPRSAIALTKEGDIMLVAVDGRAEGHADGMSIAELAYLLRILKAHCA LNLDGGGSTTLWVNGQVVNHPSDNKKFDNKGERKVHNIIAVRRLTNP
Sequences:
>Translated_287_residues MNKYLSFIFASVLTLTGVQLSKASNPSDSLAIVSAKWERTSSLQGIQLKQASIEGLFGGKQSISILTIGRAEGYTAFIAT TDSLTTTSQLAEQSRSSAAINGSYFSIKEGFSTCYLRKNEAVIDTTTTEERHLRVNGAVHMVDNNIRIIPWNDENEKKGF PLDGDILASGPLLMQDGKTCDFTTIDREFSETRHPRSAIALTKEGDIMLVAVDGRAEGHADGMSIAELAYLLRILKAHCA LNLDGGGSTTLWVNGQVVNHPSDNKKFDNKGERKVHNIIAVRRLTNP >Mature_287_residues MNKYLSFIFASVLTLTGVQLSKASNPSDSLAIVSAKWERTSSLQGIQLKQASIEGLFGGKQSISILTIGRAEGYTAFIAT TDSLTTTSQLAEQSRSSAAINGSYFSIKEGFSTCYLRKNEAVIDTTTTEERHLRVNGAVHMVDNNIRIIPWNDENEKKGF PLDGDILASGPLLMQDGKTCDFTTIDREFSETRHPRSAIALTKEGDIMLVAVDGRAEGHADGMSIAELAYLLRILKAHCA LNLDGGGSTTLWVNGQVVNHPSDNKKFDNKGERKVHNIIAVRRLTNP
Specific function: Unknown
COG id: COG4632
COG function: function code G; Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31290; Mature: 31290
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYLSFIFASVLTLTGVQLSKASNPSDSLAIVSAKWERTSSLQGIQLKQASIEGLFGGK CCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHCCCCC QSISILTIGRAEGYTAFIATTDSLTTTSQLAEQSRSSAAINGSYFSIKEGFSTCYLRKNE CEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCEEEEEECCC AVIDTTTTEERHLRVNGAVHMVDNNIRIIPWNDENEKKGFPLDGDILASGPLLMQDGKTC EEEEECCCCCEEEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCC DFTTIDREFSETRHPRSAIALTKEGDIMLVAVDGRAEGHADGMSIAELAYLLRILKAHCA CEEECCHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHE LNLDGGGSTTLWVNGQVVNHPSDNKKFDNKGERKVHNIIAVRRLTNP EEECCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHEEEECCCC >Mature Secondary Structure MNKYLSFIFASVLTLTGVQLSKASNPSDSLAIVSAKWERTSSLQGIQLKQASIEGLFGGK CCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHHCCCCC QSISILTIGRAEGYTAFIATTDSLTTTSQLAEQSRSSAAINGSYFSIKEGFSTCYLRKNE CEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCEEECCCEEEEECCCEEEEEECCC AVIDTTTTEERHLRVNGAVHMVDNNIRIIPWNDENEKKGFPLDGDILASGPLLMQDGKTC EEEEECCCCCEEEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCC DFTTIDREFSETRHPRSAIALTKEGDIMLVAVDGRAEGHADGMSIAELAYLLRILKAHCA CEEECCHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHE LNLDGGGSTTLWVNGQVVNHPSDNKKFDNKGERKVHNIIAVRRLTNP EEECCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA