Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 150006001

GI number: 150006001

Start: 4352839

End: 4353168

Strand: Reverse

Name: tnpA [H]

Synonym: BVU_3499

Alternate gene names: 150006001

Gene position: 4353168-4352839 (Counterclockwise)

Preceding gene: 150006002

Following gene: 150006000

Centisome position: 84.31

GC content: 51.82

Gene sequence:

>330_bases
ATGAGGGAATACCATGTACGCAAGGACAATACAGTGCAGTACAGGGGGAATTATTACAGCCTGCCATGCGGAACTTACCG
GAGCGGGCAGACAACCGTCTGGCTGCAGGAAACGGAAGGGAATGTGGAGCTGTACAACAAGGATACGGGGAAACTCATCT
GCCGGCATGCGCTCTGTACCAGAAAGGGAAGGACCGTTTATGACGACTCCCACAGAAAACCGAGAAACGCCGGAGTGAAG
ATAGCCGAACGCATCCTTGTCCATGTGTCGGGCAACAGGGAGGTAGCCATGTGGATGGATAATCTGAAAAGGAGGAAGGA
ACGTTATTAA

Upstream 100 bases:

>100_bases
GGTGCACGGGACCACCCGTCTTTTTCCCCGGGAAGAGTTTGCCGTGGAAAAAGGCTTTCTCATGCCCTATCATGGGACGC
CACAACCACCGCAGGAGGAG

Downstream 100 bases:

>100_bases
CGTGAGTTCGAAATAAAAATAAATATATTTCACTTATAATTAGAAACATAGCGATAAAAGTATTAAATTTATAGTGCTGA
ATTATAACATTTAAACGATT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHRKPRNAGVK
IAERILVHVSGNREVAMWMDNLKRRKERY

Sequences:

>Translated_109_residues
MREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHRKPRNAGVK
IAERILVHVSGNREVAMWMDNLKRRKERY
>Mature_109_residues
MREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCTRKGRTVYDDSHRKPRNAGVK
IAERILVHVSGNREVAMWMDNLKRRKERY

Specific function: Involved in the transposition of the insertion sequence (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12938; Mature: 12938

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCT
CCCCCCCCCCEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHH
RKGRTVYDDSHRKPRNAGVKIAERILVHVSGNREVAMWMDNLKRRKERY
CCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MREYHVRKDNTVQYRGNYYSLPCGTYRSGQTTVWLQETEGNVELYNKDTGKLICRHALCT
CCCCCCCCCCEEEECCCEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHH
RKGRTVYDDSHRKPRNAGVKIAERILVHVSGNREVAMWMDNLKRRKERY
CCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]