| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yiaL [H]
Identifier: 150005827
GI number: 150005827
Start: 4159490
End: 4159930
Strand: Reverse
Name: yiaL [H]
Synonym: BVU_3323
Alternate gene names: 150005827
Gene position: 4159930-4159490 (Counterclockwise)
Preceding gene: 150005828
Following gene: 150005826
Centisome position: 80.57
GC content: 40.59
Gene sequence:
>441_bases ATGGTAGTAGACAGATTAGAAAACTTAGAAAAGTACGCTTCATTGAATCCTTTGTTCGCTAAAGCAATGGAATATCTGAA GACTACAGACTTGAACGCTCAGGAATTAGGAAAAGTAAAATTACAGGGTGATGATCTGGTAGTAAACTTTTCTCAGACCA AGCCTAAAACTAAAGAAGAAGCAAAATTAGAAACTCATAATCAGTTTATTGATATACAGATTCCTCTGTCAGGGGTGGAA GTGATGGGTTATACGGCCCGTGAAGATCTTCCCGAAGCAGACTATGATGCAGATAAGGATATCTCGTTCTATCCGGGACT TGCCGAAAGCTATATTCCTGTAAAGCCGGGAATGTTTGCCATCTTTTTTCCACAGGATGCTCACGCTCCGGGAGTGTCTC CTGACGGTGTGAAAAAAGTGATCGTTAAAGTTTTGGTTTGA
Upstream 100 bases:
>100_bases TGTTTTCAAGCAACTGAAGCGTTTTGCTGATTTTACAAATTTCACAATAGACGACTTTGAATGATAAAAGCAATATTTTA ACCATTAAAATGAAATAATT
Downstream 100 bases:
>100_bases AAGAGAATAACTAACAAGTAATCATATTATGGAAAATACCACTCCTAAATTAGGCATAATAGAAAGTGATCCTTGGCTGG AACCGTATTCGGCAGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEEAKLETHNQFIDIQIPLSGVE VMGYTAREDLPEADYDADKDISFYPGLAESYIPVKPGMFAIFFPQDAHAPGVSPDGVKKVIVKVLV
Sequences:
>Translated_146_residues MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEEAKLETHNQFIDIQIPLSGVE VMGYTAREDLPEADYDADKDISFYPGLAESYIPVKPGMFAIFFPQDAHAPGVSPDGVKKVIVKVLV >Mature_146_residues MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEEAKLETHNQFIDIQIPLSGVE VMGYTAREDLPEADYDADKDISFYPGLAESYIPVKPGMFAIFFPQDAHAPGVSPDGVKKVIVKVLV
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yhcH/yiaL/yjgK family [H]
Homologues:
Organism=Escherichia coli, GI1790001, Length=133, Percent_Identity=34.5864661654135, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI87082398, Length=151, Percent_Identity=30.4635761589404, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789615, Length=127, Percent_Identity=34.6456692913386, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004375 [H]
Pfam domain/function: PF04074 DUF386 [H]
EC number: NA
Molecular weight: Translated: 16248; Mature: 16248
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEE CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEEECCCCCCCCHH AKLETHNQFIDIQIPLSGVEVMGYTAREDLPEADYDADKDISFYPGLAESYIPVKPGMFA HHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEE IFFPQDAHAPGVSPDGVKKVIVKVLV EECCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEE CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEEECCCCCCCCHH AKLETHNQFIDIQIPLSGVEVMGYTAREDLPEADYDADKDISFYPGLAESYIPVKPGMFA HHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEE IFFPQDAHAPGVSPDGVKKVIVKVLV EECCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]