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The map label for this gene is glgB [H]

Identifier: 150005826

GI number: 150005826

Start: 4157434

End: 4159461

Strand: Reverse

Name: glgB [H]

Synonym: BVU_3322

Alternate gene names: 150005826

Gene position: 4159461-4157434 (Counterclockwise)

Preceding gene: 150005827

Following gene: 150005825

Centisome position: 80.56

GC content: 44.13

Gene sequence:

>2028_bases
ATGGAAAATACCACTCCTAAATTAGGCATAATAGAAAGTGATCCTTGGCTGGAACCGTATTCGGCAGCGATTGAAGGACG
CCATCAGCATGCACTAGACAAAGAATTGGAACTGACCGGAGGCAAAGGAACTTTATCGGACTTTGCCACCGGATATTTAT
ATTTCGGCTTGCATCGTACCAGAAGAGGGTGGGTGTTCCGTGAATGGGCTCCGAATGCGAAGGAAATTTATCTTATCGGA
GATTTCAACGACTGGAAAGAACATGGCGATTATAGGATGTACCATGTAAAGAACTCTCCTGGTGTATGGGAGGTGGAATT
ACAAAGCGGTGCTATAAAGCATGGTGATTTGTATAAACTGAAAGTCCGTTGGAATGGCGGTGAAGGAGAACGCATACCGG
CATGGGCCAACCGTGTGGTACAGGATGAGCAGACAAAGATATTCAGTGCACAGGTCTGGGAACCGGAGAATCCTTACCGG
TTCAGAAAGAAGGTGTTCCGTGCAAAGACTGATCCTTTGATGATTTATGAATGTCATATCGGTATGGCTCAGGAAGAAGA
AAGGGTAGGGACTTATAATGAGTTCCGTGAGAAAATATTGCCGCGTATAGCGGAAGCCGGATATAACTGTATTCAGATTA
TGGCTATTCAGGAGCATCCTTATTATGGGAGTTTCGGGTATCATGTTTCCAGTTTCTTTGCTCCGTCATCCCGCTTCGGT
ACACCGGATGAATTGAAGGAATTGATTGATACGGCACATAGAATGGGAATTGCCGTCATTATGGATATTGTTCACTCTCA
TGCCGTGAAGAATGAAGTGGAGGGACTTGGCAATTTTGCCGGTGATCCTAATCAATACTTCTATCCGGGCGGGCGGCGTG
AACATCCGGCATGGGATTCCTTATGCTTTGATTATGGTAAGAATGAGGTGATTCATTTCTTGCTGTCCAATTGTAAGTAT
TGGATGGATGAGTTCCGTTTTGACGGTTTTCGTTTTGACGGTGTGACATCGATGTTGTATTATAGCCACGGCTTGGGAGA
GGCGTTCTGTAATTATGGGGATTACTTTAACGGGAATCAGGATGATAATGCGATTTGTTATTTGACATTGGCCAACAAGT
TGATTCATCAGGTAAATTCCAAAGCGATTACCATTGCGGAAGAAGTTTCGGGTATGCCCGGGTTGGCAGCACCGATTCAA
GATGGTGGATATGGGTTTGATTACCGTATGGCCATGAATATTCCGGATTATTGGATTAAAACAATCAAGGAGAAGATTGA
TGAAGACTGGAAACCGAGCAGCATGTTCTGGGAAGTGACCAACAGACGCAAGGACGAGAAGACTATTTCGTATGCCGAAA
GCCATGACCAGGCATTGGTGGGCGATAAGACTATAATTTTCCGTCTGATAGATGCTGACATGTATTGGCATTTCCAGAAA
GGGGATGAAAATTATACAGTGCATCGCGGCATCGCATTGCATAAGATGATTCGTTTGCTTACTGCCTCTACCATCAATGG
AGGATATTTGAACTTTATGGGTAATGAATTCGGGCATCCCGAATGGATTGATTTCCCGCGTGAAGGTAACGGATGGTCGC
ATAAATATGCCCGTCGTCAGTGGGGGCTTTTTGATAATAAGAACCTGTGTTACCATTACTTGGGCGATTTTGATTCAGCT
ATGGTCCACCTCATTGAGAGTGTGAAAAATATTCAGGAAACTCCAGTGATTGAAGTATGGCATAACGACGGTGACCAAGT
GTTGGCTTACCGGCGTAAGAATTTGATTTTTGTATTTAATTTCAATCCTACCAAGTCATTTACAGACTATGGTTTCCTAG
TGCCTGTCGGGGCGTATGATGTGGTACTGAATACGGATGCGACAGCTTTCGGAGGCAATGGTCTGGCTGATGACAGTATA
CGTCATTTCACTAATTTCGACCCTCTTTATAAGAAGGATAAAAAGGAATGGCTGAAACTGTATCTGCCTGCCCGTTCGGC
TGTGGTATTGAAAAAAGTGAAAGAGTAA

Upstream 100 bases:

>100_bases
CCACAGGATGCTCACGCTCCGGGAGTGTCTCCTGACGGTGTGAAAAAAGTGATCGTTAAAGTTTTGGTTTGAAAGAGAAT
AACTAACAAGTAATCATATT

Downstream 100 bases:

>100_bases
TTTATGAGCAGCAACAACAGCTTATCCTATAAAAGAGCCGCCCGCATCCTCACGGTTGCGTGCGGTCTTCTTTTCTCTAT
TTTTAGTATTGTCTATCTTT

Product: 1,4-alpha-glucan branching protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRTRRGWVFREWAPNAKEIYLIG
DFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKLKVRWNGGEGERIPAWANRVVQDEQTKIFSAQVWEPENPYR
FRKKVFRAKTDPLMIYECHIGMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDSLCFDYGKNEVIHFLLSNCKY
WMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQDDNAICYLTLANKLIHQVNSKAITIAEEVSGMPGLAAPIQ
DGGYGFDYRMAMNIPDYWIKTIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQWGLFDNKNLCYHYLGDFDSA
MVHLIESVKNIQETPVIEVWHNDGDQVLAYRRKNLIFVFNFNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSI
RHFTNFDPLYKKDKKEWLKLYLPARSAVVLKKVKE

Sequences:

>Translated_675_residues
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRTRRGWVFREWAPNAKEIYLIG
DFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKLKVRWNGGEGERIPAWANRVVQDEQTKIFSAQVWEPENPYR
FRKKVFRAKTDPLMIYECHIGMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDSLCFDYGKNEVIHFLLSNCKY
WMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQDDNAICYLTLANKLIHQVNSKAITIAEEVSGMPGLAAPIQ
DGGYGFDYRMAMNIPDYWIKTIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQWGLFDNKNLCYHYLGDFDSA
MVHLIESVKNIQETPVIEVWHNDGDQVLAYRRKNLIFVFNFNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSI
RHFTNFDPLYKKDKKEWLKLYLPARSAVVLKKVKE
>Mature_675_residues
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRTRRGWVFREWAPNAKEIYLIG
DFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKLKVRWNGGEGERIPAWANRVVQDEQTKIFSAQVWEPENPYR
FRKKVFRAKTDPLMIYECHIGMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDSLCFDYGKNEVIHFLLSNCKY
WMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQDDNAICYLTLANKLIHQVNSKAITIAEEVSGMPGLAAPIQ
DGGYGFDYRMAMNIPDYWIKTIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQWGLFDNKNLCYHYLGDFDSA
MVHLIESVKNIQETPVIEVWHNDGDQVLAYRRKNLIFVFNFNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSI
RHFTNFDPLYKKDKKEWLKLYLPARSAVVLKKVKE

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=683, Percent_Identity=45.2415812591508, Blast_Score=573, Evalue=1e-163,
Organism=Escherichia coli, GI1789839, Length=638, Percent_Identity=26.9592476489028, Blast_Score=178, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17554896, Length=685, Percent_Identity=43.7956204379562, Blast_Score=546, Evalue=1e-155,
Organism=Caenorhabditis elegans, GI32564391, Length=584, Percent_Identity=45.8904109589041, Blast_Score=511, Evalue=1e-145,
Organism=Saccharomyces cerevisiae, GI6320826, Length=698, Percent_Identity=45.702005730659, Blast_Score=566, Evalue=1e-162,
Organism=Drosophila melanogaster, GI28573410, Length=687, Percent_Identity=45.8515283842795, Blast_Score=592, Evalue=1e-169,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 78099; Mature: 78099

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRT
CCCCCCCEEEECCCCCCCHHHHHHCCCHHHHCCCCEEECCCCCCHHHHHHHHHEEEEEEC
RRGWVFREWAPNAKEIYLIGDFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKL
CCCCEEEECCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEE
KVRWNGGEGERIPAWANRVVQDEQTKIFSAQVWEPENPYRFRKKVFRAKTDPLMIYECHI
EEEEECCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECC
GMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
CCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCC
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHH
LCFDYGKNEVIHFLLSNCKYWMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQ
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCC
DDNAICYLTLANKLIHQVNSKAITIAEEVSGMPGLAAPIQDGGYGFDYRMAMNIPDYWIK
CCCCEEEEEHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
TIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
HHHHHHCCCCCCCHHEEEECCCCCCHHHHHHHHCCCCEEECCCEEEEEEEECCEEEEEEC
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQ
CCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH
WGLFDNKNLCYHYLGDFDSAMVHLIESVKNIQETPVIEVWHNDGDQVLAYRRKNLIFVFN
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEEEE
FNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSIRHFTNFDPLYKKDKKEWLKL
CCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEE
YLPARSAVVLKKVKE
ECCCCHHHHHHHHCC
>Mature Secondary Structure
MENTTPKLGIIESDPWLEPYSAAIEGRHQHALDKELELTGGKGTLSDFATGYLYFGLHRT
CCCCCCCEEEECCCCCCCHHHHHHCCCHHHHCCCCEEECCCCCCHHHHHHHHHEEEEEEC
RRGWVFREWAPNAKEIYLIGDFNDWKEHGDYRMYHVKNSPGVWEVELQSGAIKHGDLYKL
CCCCEEEECCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEE
KVRWNGGEGERIPAWANRVVQDEQTKIFSAQVWEPENPYRFRKKVFRAKTDPLMIYECHI
EEEEECCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECC
GMAQEEERVGTYNEFREKILPRIAEAGYNCIQIMAIQEHPYYGSFGYHVSSFFAPSSRFG
CCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCC
TPDELKELIDTAHRMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPGGRREHPAWDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHH
LCFDYGKNEVIHFLLSNCKYWMDEFRFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGNQ
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCC
DDNAICYLTLANKLIHQVNSKAITIAEEVSGMPGLAAPIQDGGYGFDYRMAMNIPDYWIK
CCCCEEEEEHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
TIKEKIDEDWKPSSMFWEVTNRRKDEKTISYAESHDQALVGDKTIIFRLIDADMYWHFQK
HHHHHHCCCCCCCHHEEEECCCCCCHHHHHHHHCCCCEEECCCEEEEEEEECCEEEEEEC
GDENYTVHRGIALHKMIRLLTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSHKYARRQ
CCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH
WGLFDNKNLCYHYLGDFDSAMVHLIESVKNIQETPVIEVWHNDGDQVLAYRRKNLIFVFN
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEEEE
FNPTKSFTDYGFLVPVGAYDVVLNTDATAFGGNGLADDSIRHFTNFDPLYKKDKKEWLKL
CCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEE
YLPARSAVVLKKVKE
ECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA