| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005765
Identifier: 150005765
GI number: 150005765
Start: 4087169
End: 4088956
Strand: Reverse
Name: 150005765
Synonym: BVU_3258
Alternate gene names: NA
Gene position: 4088956-4087169 (Counterclockwise)
Preceding gene: 150005766
Following gene: 150005764
Centisome position: 79.19
GC content: 39.65
Gene sequence:
>1788_bases ATGGACAATTTGAATTACGGTGTAATCGGTAATTGCTGCACAGCCGCACTGATTTCCGAAAAAGGAAATATTGAATGGCT ATGTTTTCCAAATTTTGATTCACCTTCTATTTTTGCAGCTCTTCTGGATCGTGAAAAAGGCGGGACTTTTGTTTTTGAAG TTTCAGAAGACTATCACACCATCCAATCGTATGTTCCCCATACCAATATTCTTTCCACTACTTTTGTGTCAGAGCAAGAC GAATTTGCGGTAGTCGACTTTATGCCTTGTTATGAGTTATATGATAATAAGGAATATTATCGTCCGGCTGAGGTCTATCG TTATATTCACTGGATTAAAGGTCGTCCCCGCATTAAAGTCAATTACCATCCGGCTTCCGACTATGCTCGTGGAAAAGCGT TTTTTAATGTAACTTCCCGGTATATTGAAACCTATTCTTCTTCTAACAACAAGGACAGACAATATCTGTATTCCTCTTTG CCGTTGCAAGGTATTGTAAACCATCAGGAATTTATATTAGAGAAAGATGAATTTTTTCTTCTGTCATACAATGAAAAGGT GATTCCTGTTGATATAGAGCGTGAGAAACTGGAGTATTGCCGCACGTTGGTTTATTGGTTGAACTGGACGGATCGTACAA GAAAGTTCACTATTTACAACGATATAATAGAGCGTAGCTTACTCACCCTGAAGATGATGTCTTTTTATAATGGCGCAGTA TTAGCCTCTCTTACTACCAGCCTGCCCGAAGCTGTGGGAGAAGTACGTAATTGGGATTACCGTTTTTGTTGGTTGCGGGA TGCCTCCATGTCCATAGAGACTCTTTTCAAGATAGGTCATGCCGATGCAACCCGCAAATTCATGAAATTCATACAATCTA CTTTTGTTGCCGAGCATGACACTTATCAAATAATGTATGGCATTCGTGGGGAAAGGAAATTGACTGAAGTTATACTCGAC CATCTTTCAGGATATAAAAACTCCCAACCGGTGCGTATCGGCAATGATGCTTATCATCAAAGGCAGAATGATTCATTCGG CTATCTGATGGACTTGATTTACCAATATTACCGGTTGATGCCAGGTACATTGGATGAAATAGAAGATATGTGGGAAATGG TGAAAAGTATTATGACGACTGTGATGGAAGATTGGAGAAAGCCTGATAAAGGAATTTGGGAGATACGGGGCGAAGGACAG CATTTCGTTTCGTCCAAAGTGATGTGTTGGGTTGCTTTGGACAGAGGAGCCCGCATAGCCCGTATTCTGAATAAATATGA GAATAGCCGACGTTGGGAAGAAGAAGCTGATGCAATTAAAGCGGATGTTATGAGAAACGGATGGAAGGAAGAAATACAAA GTTTTTCACAAGCATACGGCAATCTGGATTTGGACTCTTCTTTACTGTTAATGGAACCTTATGGATTTATAGATGCTGAT GATATTCGTTATCATAAAACAGTGAAAGCCGTCAAGCAATCCTTATTACACAAAGGATTGATGTACCGCTATAATACTCA TGATGATTTTGGCTGTCCTTCTTCGGCCTTTACCATCTGTACATTTTGGCTGATTCGTGCACTTTATGTCATCGGGGAAA AAGACGAAGCACGCTGTCTGTTCGATGAAATTTTGCAATATTCAAACCATTTGGGTCTGTTCAGTGAAGATATTGATTTC GAAACAAAAGAACAATTGGGTAATTTCCCACAAGCTTATTCTCATCTGGCACTGGTAAATACTGCTGTGTTATTTGCGGA AGAAGATAAAAGGCTAATCTTTAAATAA
Upstream 100 bases:
>100_bases GGTGAAAGCAGCCTTGAAAAGTGGTTTGAAAGGGCAGCTATCATCGGCTATAGATTTTTTAAAACGGATAATAAACCACT AACATTACAAAAAAATAACC
Downstream 100 bases:
>100_bases GGAAAAATTTGGAGAAGGACTGATAATCCGGTATCTTCGTACAATTAAAATCAGGAAAATGCGTATAACAAAAAAACGGA GTCCAAGGTTAATCTTGCAG
Product: alpha-glycosidase
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK
Sequences:
>Translated_595_residues MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK >Mature_595_residues MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69907; Mature: 69907
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHT CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHH IQSYVPHTNILSTTFVSEQDEFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKV HHHHCCCCCCHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEE NYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSLPLQGIVNHQEFILEKDEFFL EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCCEEE LSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV EECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHH LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHD HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC TYQIMYGIRGERKLTEVILDHLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLM CEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHC PGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQHFVSSKVMCWVALDRGARIA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCEEEEEEECCCHHHH RILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCL CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH FDEILQYSNHLGLFSEDIDFETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK HHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCC >Mature Secondary Structure MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHT CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHH IQSYVPHTNILSTTFVSEQDEFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKV HHHHCCCCCCHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEE NYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSLPLQGIVNHQEFILEKDEFFL EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCCEEE LSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV EECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHH LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHD HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC TYQIMYGIRGERKLTEVILDHLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLM CEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHC PGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQHFVSSKVMCWVALDRGARIA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCEEEEEEECCCHHHH RILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCL CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH FDEILQYSNHLGLFSEDIDFETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK HHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA