Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is 150005765

Identifier: 150005765

GI number: 150005765

Start: 4087169

End: 4088956

Strand: Reverse

Name: 150005765

Synonym: BVU_3258

Alternate gene names: NA

Gene position: 4088956-4087169 (Counterclockwise)

Preceding gene: 150005766

Following gene: 150005764

Centisome position: 79.19

GC content: 39.65

Gene sequence:

>1788_bases
ATGGACAATTTGAATTACGGTGTAATCGGTAATTGCTGCACAGCCGCACTGATTTCCGAAAAAGGAAATATTGAATGGCT
ATGTTTTCCAAATTTTGATTCACCTTCTATTTTTGCAGCTCTTCTGGATCGTGAAAAAGGCGGGACTTTTGTTTTTGAAG
TTTCAGAAGACTATCACACCATCCAATCGTATGTTCCCCATACCAATATTCTTTCCACTACTTTTGTGTCAGAGCAAGAC
GAATTTGCGGTAGTCGACTTTATGCCTTGTTATGAGTTATATGATAATAAGGAATATTATCGTCCGGCTGAGGTCTATCG
TTATATTCACTGGATTAAAGGTCGTCCCCGCATTAAAGTCAATTACCATCCGGCTTCCGACTATGCTCGTGGAAAAGCGT
TTTTTAATGTAACTTCCCGGTATATTGAAACCTATTCTTCTTCTAACAACAAGGACAGACAATATCTGTATTCCTCTTTG
CCGTTGCAAGGTATTGTAAACCATCAGGAATTTATATTAGAGAAAGATGAATTTTTTCTTCTGTCATACAATGAAAAGGT
GATTCCTGTTGATATAGAGCGTGAGAAACTGGAGTATTGCCGCACGTTGGTTTATTGGTTGAACTGGACGGATCGTACAA
GAAAGTTCACTATTTACAACGATATAATAGAGCGTAGCTTACTCACCCTGAAGATGATGTCTTTTTATAATGGCGCAGTA
TTAGCCTCTCTTACTACCAGCCTGCCCGAAGCTGTGGGAGAAGTACGTAATTGGGATTACCGTTTTTGTTGGTTGCGGGA
TGCCTCCATGTCCATAGAGACTCTTTTCAAGATAGGTCATGCCGATGCAACCCGCAAATTCATGAAATTCATACAATCTA
CTTTTGTTGCCGAGCATGACACTTATCAAATAATGTATGGCATTCGTGGGGAAAGGAAATTGACTGAAGTTATACTCGAC
CATCTTTCAGGATATAAAAACTCCCAACCGGTGCGTATCGGCAATGATGCTTATCATCAAAGGCAGAATGATTCATTCGG
CTATCTGATGGACTTGATTTACCAATATTACCGGTTGATGCCAGGTACATTGGATGAAATAGAAGATATGTGGGAAATGG
TGAAAAGTATTATGACGACTGTGATGGAAGATTGGAGAAAGCCTGATAAAGGAATTTGGGAGATACGGGGCGAAGGACAG
CATTTCGTTTCGTCCAAAGTGATGTGTTGGGTTGCTTTGGACAGAGGAGCCCGCATAGCCCGTATTCTGAATAAATATGA
GAATAGCCGACGTTGGGAAGAAGAAGCTGATGCAATTAAAGCGGATGTTATGAGAAACGGATGGAAGGAAGAAATACAAA
GTTTTTCACAAGCATACGGCAATCTGGATTTGGACTCTTCTTTACTGTTAATGGAACCTTATGGATTTATAGATGCTGAT
GATATTCGTTATCATAAAACAGTGAAAGCCGTCAAGCAATCCTTATTACACAAAGGATTGATGTACCGCTATAATACTCA
TGATGATTTTGGCTGTCCTTCTTCGGCCTTTACCATCTGTACATTTTGGCTGATTCGTGCACTTTATGTCATCGGGGAAA
AAGACGAAGCACGCTGTCTGTTCGATGAAATTTTGCAATATTCAAACCATTTGGGTCTGTTCAGTGAAGATATTGATTTC
GAAACAAAAGAACAATTGGGTAATTTCCCACAAGCTTATTCTCATCTGGCACTGGTAAATACTGCTGTGTTATTTGCGGA
AGAAGATAAAAGGCTAATCTTTAAATAA

Upstream 100 bases:

>100_bases
GGTGAAAGCAGCCTTGAAAAGTGGTTTGAAAGGGCAGCTATCATCGGCTATAGATTTTTTAAAACGGATAATAAACCACT
AACATTACAAAAAAATAACC

Downstream 100 bases:

>100_bases
GGAAAAATTTGGAGAAGGACTGATAATCCGGTATCTTCGTACAATTAAAATCAGGAAAATGCGTATAACAAAAAAACGGA
GTCCAAGGTTAATCTTGCAG

Product: alpha-glycosidase

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD
EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL
PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV
LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD
HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ
HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD
DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF
ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK

Sequences:

>Translated_595_residues
MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD
EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL
PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV
LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD
HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ
HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD
DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF
ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK
>Mature_595_residues
MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHTIQSYVPHTNILSTTFVSEQD
EFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKVNYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSL
PLQGIVNHQEFILEKDEFFLLSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV
LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHDTYQIMYGIRGERKLTEVILD
HLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLMPGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQ
HFVSSKVMCWVALDRGARIARILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD
DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCLFDEILQYSNHLGLFSEDIDF
ETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69907; Mature: 69907

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHT
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHH
IQSYVPHTNILSTTFVSEQDEFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKV
HHHHCCCCCCHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEE
NYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSLPLQGIVNHQEFILEKDEFFL
EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCCEEE
LSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV
EECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHH
LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TYQIMYGIRGERKLTEVILDHLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLM
CEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHC
PGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQHFVSSKVMCWVALDRGARIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCEEEEEEECCCHHHH
RILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCL
CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
FDEILQYSNHLGLFSEDIDFETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK
HHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MDNLNYGVIGNCCTAALISEKGNIEWLCFPNFDSPSIFAALLDREKGGTFVFEVSEDYHT
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHH
IQSYVPHTNILSTTFVSEQDEFAVVDFMPCYELYDNKEYYRPAEVYRYIHWIKGRPRIKV
HHHHCCCCCCHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEE
NYHPASDYARGKAFFNVTSRYIETYSSSNNKDRQYLYSSLPLQGIVNHQEFILEKDEFFL
EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCCEEE
LSYNEKVIPVDIEREKLEYCRTLVYWLNWTDRTRKFTIYNDIIERSLLTLKMMSFYNGAV
EECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHH
LASLTTSLPEAVGEVRNWDYRFCWLRDASMSIETLFKIGHADATRKFMKFIQSTFVAEHD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TYQIMYGIRGERKLTEVILDHLSGYKNSQPVRIGNDAYHQRQNDSFGYLMDLIYQYYRLM
CEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHC
PGTLDEIEDMWEMVKSIMTTVMEDWRKPDKGIWEIRGEGQHFVSSKVMCWVALDRGARIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCEEEEEEECCCHHHH
RILNKYENSRRWEEEADAIKADVMRNGWKEEIQSFSQAYGNLDLDSSLLLMEPYGFIDAD
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
DIRYHKTVKAVKQSLLHKGLMYRYNTHDDFGCPSSAFTICTFWLIRALYVIGEKDEARCL
CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
FDEILQYSNHLGLFSEDIDFETKEQLGNFPQAYSHLALVNTAVLFAEEDKRLIFK
HHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA