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The map label for this gene is yidE [C]

Identifier: 150005624

GI number: 150005624

Start: 3935897

End: 3937585

Strand: Reverse

Name: yidE [C]

Synonym: BVU_3112

Alternate gene names: 150005624

Gene position: 3937585-3935897 (Counterclockwise)

Preceding gene: 150005649

Following gene: 150005622

Centisome position: 76.26

GC content: 44.23

Gene sequence:

>1689_bases
ATGGAACTTTTTAGAAATCTCTTTGAAGGGTACCCTAATTTATGGGGCGGCGGAGTAGCACATTCCGTACTTATTCTTTC
ACTGGTCATTGCTTTCGGCATCATGTTAGGAAAAATAAAAGTGGCAGGTATCTCATTGGGAGTAACCTGGATACTTTTTG
TAGGAATTGTATTCGGTCATTTCAATCTGAACCTGGACGAACATCTGTTGCATTTCTTAAAGGAGTTCGGTCTGATATTA
TTTGTCTACTCAGTCGGACTACAAGTGGGTCCCGGTTTCTTCTCAGCATTCAAGAAAGGAGGGTTCACACTGAACCTGCT
TGCCATGATGGTTGTATTTTTAGGTGTGACCATCACCATTATACTCCATTTCATAACAGGTGTCCCCATTACCACAATGG
TAGGAATTCTTTCTGGAGCTGTAACCAATACCCCGGGACTAGGTGCCGCACAGCAAGCAAACAGTGATCTGAATGGTATA
GACGCTCCCGAAATAGCACTGGGATATGCCGTAGCCTATCCATTGGGAGTAGTAGGGTGTATTCTCTCCCTGCTGGCATT
GAAATATATCCTGCGCATCAACACAAAAACCGAAGAAGCCGATGCGGAACGGGGATTGGGGCATCTACAAGAACTGACTG
TACGCCCTATCTCACTAGAAATACGCAATGAAGCCGTAGAAGGTAAAACAATAAAAGAAATCAAGCCATTGGTAAACCGT
GATTTTGTGATTTCACGCATACGGCATTGTGACGGAGACAGACAAACAGAACTGGTGAACTCCACTACAGTATTTCACAT
ACACGATGAGATTCTTGTTATCGCCAATCCGATAGATGTAGAAGCTATCACTGTCTTTTTTGGAAAACAAGTGAATGTGG
AATGGGATTTCCAAAACAAACAACTTATCTCCAGAAAAATTCTGATCACCAAGCCTGAATTGAACGGTAAGACATTGGCC
CAACTAAAAATCAGGAATAACTTCGGAGCAAGCATTACCCGTGTAAACCGTTCGGGTGTAGACCTTGTGGCCACTCCCAA
CCTGCAATTGCAAATGGGTGACCGGGTGAAGATTGTGGGTAGCGAACTAGCTGTAGCCCATGCCGAAAAGATTCTAGGTA
ATTCCATGAAACGTTTGAATCATCCCAACCTGATCCCTATTTTCTTAGGCATCGCATTAGGGTGTATTCTAGGAAGCACT
CCTTTTTTATTCCCCGGTATCCCCCAACCGGTAAAACTGGGACTGGCAGGAGGCCCCCTTATCGTATCCATCCTGATAAG
CCGTTTCGGACCACATTATAAACTGATAACCTATACCACCATAAGTGCCAATTTGATGGTACGTGAAATCGGTATCTCGC
TTTTCCTTGCTTGCGTAGGATTAGGAGCCGGCAAAGGATTCATCGAAACAATCATTAACGAGGGTGGATATGTATGGATA
GCATACGGCGCCATTATTACGCTGCTGCCTTTACTGATTGTAGGTATAATAGGACGATATGTTTATAAACTGAACTATTA
CACCTTGATCGGAGTATTGTCCGGAGCCACCACCAATCCGCCCGCATTAGCCTACTCCAATGATTTGACCTCTTGTGACG
CTCCGGCAGTGGGTTATGCCACCGTTTATCCGCTTACCATGTTTTTACGTGTACTCACAGCACAAATATTAATATTGGCA
CTTGCCTGA

Upstream 100 bases:

>100_bases
TCAATTAAATAAGCTACCTTTGCAGTCATTTTTGCCAGAATGACAGCTATACAACAATGATAAAATTGATACTATAAATA
ATTAAACTAGATAATGAATT

Downstream 100 bases:

>100_bases
TCCCGCCAGAATTATTGCAAATTCATATTACCGTAGGAGTGAATCTAATTCACTCCTACGGTTCAAAATCCCCCACCTCT
TTCAAAAGCAACCATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MELFRNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKVAGISLGVTWILFVGIVFGHFNLNLDEHLLHFLKEFGLIL
FVYSVGLQVGPGFFSAFKKGGFTLNLLAMMVVFLGVTITIILHFITGVPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIALGYAVAYPLGVVGCILSLLALKYILRINTKTEEADAERGLGHLQELTVRPISLEIRNEAVEGKTIKEIKPLVNR
DFVISRIRHCDGDRQTELVNSTTVFHIHDEILVIANPIDVEAITVFFGKQVNVEWDFQNKQLISRKILITKPELNGKTLA
QLKIRNNFGASITRVNRSGVDLVATPNLQLQMGDRVKIVGSELAVAHAEKILGNSMKRLNHPNLIPIFLGIALGCILGST
PFLFPGIPQPVKLGLAGGPLIVSILISRFGPHYKLITYTTISANLMVREIGISLFLACVGLGAGKGFIETIINEGGYVWI
AYGAIITLLPLLIVGIIGRYVYKLNYYTLIGVLSGATTNPPALAYSNDLTSCDAPAVGYATVYPLTMFLRVLTAQILILA
LA

Sequences:

>Translated_562_residues
MELFRNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKVAGISLGVTWILFVGIVFGHFNLNLDEHLLHFLKEFGLIL
FVYSVGLQVGPGFFSAFKKGGFTLNLLAMMVVFLGVTITIILHFITGVPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIALGYAVAYPLGVVGCILSLLALKYILRINTKTEEADAERGLGHLQELTVRPISLEIRNEAVEGKTIKEIKPLVNR
DFVISRIRHCDGDRQTELVNSTTVFHIHDEILVIANPIDVEAITVFFGKQVNVEWDFQNKQLISRKILITKPELNGKTLA
QLKIRNNFGASITRVNRSGVDLVATPNLQLQMGDRVKIVGSELAVAHAEKILGNSMKRLNHPNLIPIFLGIALGCILGST
PFLFPGIPQPVKLGLAGGPLIVSILISRFGPHYKLITYTTISANLMVREIGISLFLACVGLGAGKGFIETIINEGGYVWI
AYGAIITLLPLLIVGIIGRYVYKLNYYTLIGVLSGATTNPPALAYSNDLTSCDAPAVGYATVYPLTMFLRVLTAQILILA
LA
>Mature_562_residues
MELFRNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKVAGISLGVTWILFVGIVFGHFNLNLDEHLLHFLKEFGLIL
FVYSVGLQVGPGFFSAFKKGGFTLNLLAMMVVFLGVTITIILHFITGVPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIALGYAVAYPLGVVGCILSLLALKYILRINTKTEEADAERGLGHLQELTVRPISLEIRNEAVEGKTIKEIKPLVNR
DFVISRIRHCDGDRQTELVNSTTVFHIHDEILVIANPIDVEAITVFFGKQVNVEWDFQNKQLISRKILITKPELNGKTLA
QLKIRNNFGASITRVNRSGVDLVATPNLQLQMGDRVKIVGSELAVAHAEKILGNSMKRLNHPNLIPIFLGIALGCILGST
PFLFPGIPQPVKLGLAGGPLIVSILISRFGPHYKLITYTTISANLMVREIGISLFLACVGLGAGKGFIETIINEGGYVWI
AYGAIITLLPLLIVGIIGRYVYKLNYYTLIGVLSGATTNPPALAYSNDLTSCDAPAVGYATVYPLTMFLRVLTAQILILA
LA

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=549, Percent_Identity=39.344262295082, Blast_Score=392, Evalue=1e-110,
Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=28.2142857142857, Blast_Score=169, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60778; Mature: 60778

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFRNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKVAGISLGVTWILFVGIVFGH
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHH
FNLNLDEHLLHFLKEFGLILFVYSVGLQVGPGFFSAFKKGGFTLNLLAMMVVFLGVTITI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ILHFITGVPITTMVGILSGAVTNTPGLGAAQQANSDLNGIDAPEIALGYAVAYPLGVVGC
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILSLLALKYILRINTKTEEADAERGLGHLQELTVRPISLEIRNEAVEGKTIKEIKPLVNR
HHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCH
DFVISRIRHCDGDRQTELVNSTTVFHIHDEILVIANPIDVEAITVFFGKQVNVEWDFQNK
HHHHHHHHHCCCCCHHHEECCEEEEEEECCEEEEECCCCCEEEEEEECCEEEEEECCCCH
QLISRKILITKPELNGKTLAQLKIRNNFGASITRVNRSGVDLVATPNLQLQMGDRVKIVG
HHHHCEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCEEEEEC
SELAVAHAEKILGNSMKRLNHPNLIPIFLGIALGCILGSTPFLFPGIPQPVKLGLAGGPL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHH
IVSILISRFGPHYKLITYTTISANLMVREIGISLFLACVGLGAGKGFIETIINEGGYVWI
HHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEE
AYGAIITLLPLLIVGIIGRYVYKLNYYTLIGVLSGATTNPPALAYSNDLTSCDAPAVGYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCEEECCCCCCCCCCCCCHH
TVYPLTMFLRVLTAQILILALA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELFRNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKVAGISLGVTWILFVGIVFGH
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHH
FNLNLDEHLLHFLKEFGLILFVYSVGLQVGPGFFSAFKKGGFTLNLLAMMVVFLGVTITI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ILHFITGVPITTMVGILSGAVTNTPGLGAAQQANSDLNGIDAPEIALGYAVAYPLGVVGC
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILSLLALKYILRINTKTEEADAERGLGHLQELTVRPISLEIRNEAVEGKTIKEIKPLVNR
HHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCH
DFVISRIRHCDGDRQTELVNSTTVFHIHDEILVIANPIDVEAITVFFGKQVNVEWDFQNK
HHHHHHHHHCCCCCHHHEECCEEEEEEECCEEEEECCCCCEEEEEEECCEEEEEECCCCH
QLISRKILITKPELNGKTLAQLKIRNNFGASITRVNRSGVDLVATPNLQLQMGDRVKIVG
HHHHCEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCEEEEEC
SELAVAHAEKILGNSMKRLNHPNLIPIFLGIALGCILGSTPFLFPGIPQPVKLGLAGGPL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHH
IVSILISRFGPHYKLITYTTISANLMVREIGISLFLACVGLGAGKGFIETIINEGGYVWI
HHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEE
AYGAIITLLPLLIVGIIGRYVYKLNYYTLIGVLSGATTNPPALAYSNDLTSCDAPAVGYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCEEECCCCCCCCCCCCCHH
TVYPLTMFLRVLTAQILILALA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA