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The map label for this gene is 150004756

Identifier: 150004756

GI number: 150004756

Start: 2864500

End: 2865066

Strand: Direct

Name: 150004756

Synonym: BVU_2218

Alternate gene names: NA

Gene position: 2864500-2865066 (Clockwise)

Preceding gene: 150004755

Following gene: 150004757

Centisome position: 55.48

GC content: 33.69

Gene sequence:

>567_bases
ATGATGATAAATTTGAAAGATAATAGCGAAAAGGATAAGTATATCTTGGAGTTGTTCCAGACATCTCCTAAGGAGGCTTT
TCGTTTATTATTTGATGCTTATCACATGAAATTATGTATATATGCGGTGCAGCTGACCGATTCTTTTGAGATGGCTGAAG
ATATTGTGCAGGATTTCTTTATCTATTTTTGGGAGAAGAAATATTATTTGAAAATAAATCAGAATCTTCGTTATTATCTT
TATTTGTCTGTGCGGAATGCGGCCATCAATGCTTTGCAGAAAAACAACATGTTGTCTATGGAAGAACTCTCAGGCATTGA
TATGGGTATTCCTGAAGAGTCTATAGATGAAGAGGAGCAAGAGGAACGAAATAAGTTATTATTGGAAAAACTACAAAAAT
TACCTCATCAGGAATTACAAGTGGTGAGAGCTGTCATTATGGAAAATAAGAAATATAAAGAAGCTGCTGAGGAACTTCAT
ATTTCTGTGAATACCCTAAAAACTCATCTGACAAGAGCATTGAAACAATTAAGAAAAGAATACAATCTGCACTCACTGTT
TTACTAA

Upstream 100 bases:

>100_bases
GGTTCGAATCCCACTAGTCACCCCTTCACCTATGAAAGGTTCTGTAAATCTAATGATTTATAGAACCTTTTTCAGTTTTT
ATGTCTATTAGTGTATTATC

Downstream 100 bases:

>100_bases
AATTAAATTTTTCTTCTTTTTCTGTCACCCATTTATTAATTTGGACTCTCTTTTATTAAAAGAAAGTAATCAATGAACAA
AGAGAATCCAAAAAAGAACA

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor ECF Subfamily; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-H Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma-70 Factor

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFFIYFWEKKYYLKINQNLRYYL
YLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQEERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELH
ISVNTLKTHLTRALKQLRKEYNLHSLFY

Sequences:

>Translated_188_residues
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFFIYFWEKKYYLKINQNLRYYL
YLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQEERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELH
ISVNTLKTHLTRALKQLRKEYNLHSLFY
>Mature_188_residues
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFFIYFWEKKYYLKINQNLRYYL
YLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQEERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELH
ISVNTLKTHLTRALKQLRKEYNLHSLFY

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22574; Mature: 22574

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFF
CEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IYFWEKKYYLKINQNLRYYLYLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQ
HHHHCCEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHCCHHHH
EERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELHISVNTLKTHLTRALKQLRKE
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNLHSLFY
CCHHHCCC
>Mature Secondary Structure
MMINLKDNSEKDKYILELFQTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFF
CEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IYFWEKKYYLKINQNLRYYLYLSVRNAAINALQKNNMLSMEELSGIDMGIPEESIDEEEQ
HHHHCCEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHCCHHHH
EERNKLLLEKLQKLPHQELQVVRAVIMENKKYKEAAEELHISVNTLKTHLTRALKQLRKE
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNLHSLFY
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA