Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is perR [H]

Identifier: 150004562

GI number: 150004562

Start: 2609613

End: 2610104

Strand: Direct

Name: perR [H]

Synonym: BVU_2017

Alternate gene names: 150004562

Gene position: 2609613-2610104 (Clockwise)

Preceding gene: 150004561

Following gene: 150004563

Centisome position: 50.54

GC content: 39.23

Gene sequence:

>492_bases
TTGACGGCGGAACTGAAATCTGTGATGGAAGAGAATGTGAAAGATAAGGTAAAGCAGATCTTGACAGAATATCTGCAGGT
TAACGGGCATCGGAAGACACCTGAACGATATGCTATACTCGATACTATCTATTCCATTAAAGGTCATTTTGACATTGATA
CGCTTTATAATTATATGGCAAATGAAGGGAAATTCCGGGTAAGCCGGGCTACTCTTTATAATACCATCATTCTTTTTATC
GATGCAAAATTGGTTATTAAACATCAGTTCGGCAATTCTTCCCAGTACGAGCGTGCGTACAACAATGAAACCCATCATCA
CATGATATGTACGGAATGTGGCAAAGTGACCGAATTTCAGGATGAGAATCTGAAACAAGCCATTGCCAATACGAAACTGA
AGAAATTTCATGCCTCGCACTATTCCTTATATATCTATGGTGTATGCAGCAAGTGTACTTGGGCCAAGCGTAGGAAGAAA
AAAGATAAGTAA

Upstream 100 bases:

>100_bases
CAAATCAGATAAGGTAGAAATAGCTTCTTTGGCTGGAGAAATAAAATTAGAAACAGAATATTGGCATTAAACTTTCATGT
TATCATAAAAAGGCTTAACT

Downstream 100 bases:

>100_bases
CATAAAACGAAGAAACATGAAAGTAGATGTCTTGTTAGGTTTGCAATGGGGTGATGAAGGCAAAGGAAAGGTTGTCGATG
TTCTGACTCCCCGTTATGAT

Product: putative iron uptake regulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFI
DAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKK
KDK

Sequences:

>Translated_163_residues
MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFI
DAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKK
KDK
>Mature_162_residues
TAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFID
AKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKK
DK

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 19165; Mature: 19034

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NEGKFRVSRATLYNTIILFIDAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQ
CCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCEEHHHHCCCCCCCC
DENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKKDK
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCC
>Mature Secondary Structure 
TAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NEGKFRVSRATLYNTIILFIDAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQ
CCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCEEHHHHCCCCCCCC
DENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKKDK
HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA