| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is perR [H]
Identifier: 150004562
GI number: 150004562
Start: 2609613
End: 2610104
Strand: Direct
Name: perR [H]
Synonym: BVU_2017
Alternate gene names: 150004562
Gene position: 2609613-2610104 (Clockwise)
Preceding gene: 150004561
Following gene: 150004563
Centisome position: 50.54
GC content: 39.23
Gene sequence:
>492_bases TTGACGGCGGAACTGAAATCTGTGATGGAAGAGAATGTGAAAGATAAGGTAAAGCAGATCTTGACAGAATATCTGCAGGT TAACGGGCATCGGAAGACACCTGAACGATATGCTATACTCGATACTATCTATTCCATTAAAGGTCATTTTGACATTGATA CGCTTTATAATTATATGGCAAATGAAGGGAAATTCCGGGTAAGCCGGGCTACTCTTTATAATACCATCATTCTTTTTATC GATGCAAAATTGGTTATTAAACATCAGTTCGGCAATTCTTCCCAGTACGAGCGTGCGTACAACAATGAAACCCATCATCA CATGATATGTACGGAATGTGGCAAAGTGACCGAATTTCAGGATGAGAATCTGAAACAAGCCATTGCCAATACGAAACTGA AGAAATTTCATGCCTCGCACTATTCCTTATATATCTATGGTGTATGCAGCAAGTGTACTTGGGCCAAGCGTAGGAAGAAA AAAGATAAGTAA
Upstream 100 bases:
>100_bases CAAATCAGATAAGGTAGAAATAGCTTCTTTGGCTGGAGAAATAAAATTAGAAACAGAATATTGGCATTAAACTTTCATGT TATCATAAAAAGGCTTAACT
Downstream 100 bases:
>100_bases CATAAAACGAAGAAACATGAAAGTAGATGTCTTGTTAGGTTTGCAATGGGGTGATGAAGGCAAAGGAAAGGTTGTCGATG TTCTGACTCCCCGTTATGAT
Product: putative iron uptake regulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFI DAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKK KDK
Sequences:
>Translated_163_residues MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFI DAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKK KDK >Mature_162_residues TAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMANEGKFRVSRATLYNTIILFID AKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQDENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKK DK
Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 19165; Mature: 19034
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NEGKFRVSRATLYNTIILFIDAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQ CCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCEEHHHHCCCCCCCC DENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKKDK HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCC >Mature Secondary Structure TAELKSVMEENVKDKVKQILTEYLQVNGHRKTPERYAILDTIYSIKGHFDIDTLYNYMA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NEGKFRVSRATLYNTIILFIDAKLVIKHQFGNSSQYERAYNNETHHHMICTECGKVTEFQ CCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCEEHHHHCCCCCCCC DENLKQAIANTKLKKFHASHYSLYIYGVCSKCTWAKRRKKKDK HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA