| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is ptpA [H]
Identifier: 150004541
GI number: 150004541
Start: 2576645
End: 2578846
Strand: Reverse
Name: ptpA [H]
Synonym: BVU_1991
Alternate gene names: 150004541
Gene position: 2578846-2576645 (Counterclockwise)
Preceding gene: 150004544
Following gene: 150004540
Centisome position: 49.95
GC content: 40.55
Gene sequence:
>2202_bases ATGAGAAAATTAAGTATATTTATTATTTTATTCTTCTGCTTGCTGACAGTCGGAGCTCAACAAGTAAGCTTGCAAGACGT AGCAAACAGAACGTATCATGCCGAAGGAATCAGAGGTATCAAACCGATGTTGGATGGAGAACATTATACCCAAATGAGTG CCGATGGCAAAAAAATCATACAGTATTCTTTCAAGACCGGCAAAGAAACAGGTACCATCTTCGATGTAAATACGGCCCGT GACTGTAGCATCAAGTCATTTGATGACTATATCATGTCACCCGATGAAAAACTGATTCTAATACAGACTGAAACCAAACC TATTTATCGTCGTTCGTTTACCGCCAATTACTATATTTTCAACGTAAAAAACAATAAAATGGAACCGCTCTCAGAAAACG GTCCACAACAGGTTCCTTTATTCTCGCCGGATGGCAATCAGATAGCTTTTGTACGTGATAATAATATCTATCTGGTAAAA TTATTGTTTGGCAACAGTGAATCACAAGTAACCAAAGACGGCAAATTCAACGAAGTGCTAAATGGTATTCCCGACTGGGT ATATGAAGAGGAATTCGGCTTCAACCGTGCTTTCGACTTCAGTGCAGACAGCCAGATGCTTGCCTATATCCGTTTTGATG AGAGTCAAGTACCTATGTATTCTTTTCCACTATACAAAGGTATGGTTCCCGCATTAGAGAAATTCAGCACTTATCCGGGA GAATATGAATACAAATACCCTATGCCAGGAATTGACAATTCCAAAGTAACCGTTCATACTTTTGATATAAAAAGTAAGGT AACCCGCAAGATGGACTTGCCTCTAGATGCAGACGGTTATATCCCTCGCATCAAGTTTACGGATGATGAAAATGCGTTGG CAATCACGACTTTGAACCGTCATCAAAACCGTTTCGACCTCTATTTTGCCAATCCACGAAGTACATTGTGTAAACTGATG GTACGTGATGAAGCTCCCCAATACATTAAAGAAGAAGCCTACTCCAACATCGTTTTCTATCCAAAAAACTTTGTGGTGAT GAGTGAAAAAGACGGTTATAACCATCTCTATCTTTACACTAGCGGAGGAAACCTGGTTAAGCAAATCACAAAAGGGAACT TCGAAGTGAAAGATTTCCTGGGATGGGATGAAGCTACCAACACATTCTATTTTGAAAGCAATGAAGGTAGTCCGCTACGC ACCGCTATCTACAAAGTGGACGGCAAAGGTAAAAAGACCAAACTATCCAAACAGGAAGGAACTCATAAAGCTATTTTCAG TAACAATATGAAGTATTACATCAATACTTTCTCTAATATCAACACCCCTCCTGTCATTACCCTTAATGACAATAATGGTA AAGAATTGGCAACCTTAGTAGATAATAACACATTGAAACACCAAGTTTCACGTCTGAATATGCCAAATAAAGAACTATTT AGTTTCAAGACCAATGACGGTGTGGAATTGAATGGTTGGATAATGAAACCCGCAAATTTCAATCCGAACAAAAAATATCC TGTTATCATGCACCAATATAGTGGACCGGGTTCACAAGAAGTTGCAGACAAATGGGGAATTGGAGCCCGTAGAGATGGCG GCATGTTCGAAGCTTATATGGCCGGTCAAGGCTTCATCATGGCTTGTGTAGACGGACGCGGAACCGGTGGCCGAGGGTCT GATTTTGAAAAATGCACCTACTTGAGTTTAGGAGTAAAAGAATCGAAAGATCAAGTAGAAGCCGCCAAATACTTAAGTAC ACTACCCTATGTAGATGGTAACCGTATCGGTATATGGGGATGGAGCTATGGAGGTTACAATACATTAATGTCCATGAGTG AAGGAACACCGATATTCAAAGCTGGAGTAGCTGTTGCAGCTCCTACAGACTGGCGTTTCTACGATTCGGTATATACAGAG CGCTTCATGCGTACCCCCAAAGAAAACATGGAAGGTTACAATGCTGCATCTGCTATTAACCGTGCCAACAAACTGAACGG TGAATTGTTGCTGATCCACGGCACAGCAGATGATAATGTACACTTACGTAACAACGCAGAATACAGTGAAGCATTGGTAC AGGCCGACAAGCAATTTGACATGCAAATCTATACCAACCGCAACCATGGAATCAGTGGAGGCAACACAACTAAACATTTA CTGACTCGCGTAGCCAATTTCTTTATTGATAATTTAAAATAA
Upstream 100 bases:
>100_bases ATCTCTCTGTTCATGAACTTATTTTGCGGGACAAAGATACGTATTTTCAAACAAAAGTTTTACCTTTGTCTTTGATTATC ATTTAAAGAATTTATCTATT
Downstream 100 bases:
>100_bases AAAACCATTCACCACAGATTATACAATTTTACATAAAAACCGAATGAAAACAATTTGCATTGGTATAATCTGTGGTGAAT TATAAATCTAATATCATCAT
Product: dipeptidyl peptidase IV
Products: NA
Alternate protein names: PTP; Prolyl tripeptidyl peptidase A [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MRKLSIFIILFFCLLTVGAQQVSLQDVANRTYHAEGIRGIKPMLDGEHYTQMSADGKKIIQYSFKTGKETGTIFDVNTAR DCSIKSFDDYIMSPDEKLILIQTETKPIYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRDNNIYLVK LLFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMYSFPLYKGMVPALEKFSTYPG EYEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNRHQNRFDLYFANPRSTLCKLM VRDEAPQYIKEEAYSNIVFYPKNFVVMSEKDGYNHLYLYTSGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLR TAIYKVDGKGKKTKLSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKHQVSRLNMPNKELF SFKTNDGVELNGWIMKPANFNPNKKYPVIMHQYSGPGSQEVADKWGIGARRDGGMFEAYMAGQGFIMACVDGRGTGGRGS DFEKCTYLSLGVKESKDQVEAAKYLSTLPYVDGNRIGIWGWSYGGYNTLMSMSEGTPIFKAGVAVAAPTDWRFYDSVYTE RFMRTPKENMEGYNAASAINRANKLNGELLLIHGTADDNVHLRNNAEYSEALVQADKQFDMQIYTNRNHGISGGNTTKHL LTRVANFFIDNLK
Sequences:
>Translated_733_residues MRKLSIFIILFFCLLTVGAQQVSLQDVANRTYHAEGIRGIKPMLDGEHYTQMSADGKKIIQYSFKTGKETGTIFDVNTAR DCSIKSFDDYIMSPDEKLILIQTETKPIYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRDNNIYLVK LLFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMYSFPLYKGMVPALEKFSTYPG EYEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNRHQNRFDLYFANPRSTLCKLM VRDEAPQYIKEEAYSNIVFYPKNFVVMSEKDGYNHLYLYTSGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLR TAIYKVDGKGKKTKLSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKHQVSRLNMPNKELF SFKTNDGVELNGWIMKPANFNPNKKYPVIMHQYSGPGSQEVADKWGIGARRDGGMFEAYMAGQGFIMACVDGRGTGGRGS DFEKCTYLSLGVKESKDQVEAAKYLSTLPYVDGNRIGIWGWSYGGYNTLMSMSEGTPIFKAGVAVAAPTDWRFYDSVYTE RFMRTPKENMEGYNAASAINRANKLNGELLLIHGTADDNVHLRNNAEYSEALVQADKQFDMQIYTNRNHGISGGNTTKHL LTRVANFFIDNLK >Mature_733_residues MRKLSIFIILFFCLLTVGAQQVSLQDVANRTYHAEGIRGIKPMLDGEHYTQMSADGKKIIQYSFKTGKETGTIFDVNTAR DCSIKSFDDYIMSPDEKLILIQTETKPIYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRDNNIYLVK LLFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMYSFPLYKGMVPALEKFSTYPG EYEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNRHQNRFDLYFANPRSTLCKLM VRDEAPQYIKEEAYSNIVFYPKNFVVMSEKDGYNHLYLYTSGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLR TAIYKVDGKGKKTKLSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKHQVSRLNMPNKELF SFKTNDGVELNGWIMKPANFNPNKKYPVIMHQYSGPGSQEVADKWGIGARRDGGMFEAYMAGQGFIMACVDGRGTGGRGS DFEKCTYLSLGVKESKDQVEAAKYLSTLPYVDGNRIGIWGWSYGGYNTLMSMSEGTPIFKAGVAVAAPTDWRFYDSVYTE RFMRTPKENMEGYNAASAINRANKLNGELLLIHGTADDNVHLRNNAEYSEALVQADKQFDMQIYTNRNHGISGGNTTKHL LTRVANFFIDNLK
Specific function: Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI16933540, Length=749, Percent_Identity=30.4405874499332, Blast_Score=317, Evalue=3e-86, Organism=Homo sapiens, GI18765694, Length=701, Percent_Identity=31.9543509272468, Blast_Score=289, Evalue=7e-78, Organism=Homo sapiens, GI86792863, Length=771, Percent_Identity=25.810635538262, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI86792778, Length=771, Percent_Identity=25.810635538262, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI86792774, Length=771, Percent_Identity=25.810635538262, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI295849272, Length=685, Percent_Identity=28.6131386861314, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI85787627, Length=685, Percent_Identity=28.6131386861314, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI52426756, Length=685, Percent_Identity=28.6131386861314, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI295842359, Length=685, Percent_Identity=28.6131386861314, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI295842403, Length=685, Percent_Identity=28.6131386861314, Blast_Score=251, Evalue=3e-66, Organism=Homo sapiens, GI18450280, Length=709, Percent_Identity=27.6445698166432, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI37577089, Length=709, Percent_Identity=27.6445698166432, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI194394146, Length=726, Percent_Identity=25.6198347107438, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI37577091, Length=708, Percent_Identity=24.5762711864407, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI18450278, Length=509, Percent_Identity=23.9685658153242, Blast_Score=83, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17564632, Length=621, Percent_Identity=25.4428341384863, Blast_Score=171, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17564634, Length=621, Percent_Identity=25.7648953301127, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17550672, Length=677, Percent_Identity=26.1447562776957, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17508019, Length=264, Percent_Identity=32.5757575757576, Blast_Score=149, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17508017, Length=264, Percent_Identity=32.5757575757576, Blast_Score=149, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6321817, Length=674, Percent_Identity=30.7121661721068, Blast_Score=263, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6324793, Length=685, Percent_Identity=26.8613138686131, Blast_Score=225, Evalue=2e-59, Organism=Drosophila melanogaster, GI24582032, Length=666, Percent_Identity=29.4294294294294, Blast_Score=258, Evalue=9e-69, Organism=Drosophila melanogaster, GI17933704, Length=721, Percent_Identity=29.2649098474341, Blast_Score=250, Evalue=3e-66, Organism=Drosophila melanogaster, GI161083744, Length=721, Percent_Identity=29.2649098474341, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI221331178, Length=721, Percent_Identity=29.2649098474341, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI45550825, Length=704, Percent_Identity=26.2784090909091, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI45553511, Length=704, Percent_Identity=26.2784090909091, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI45551969, Length=704, Percent_Identity=26.2784090909091, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24582257, Length=287, Percent_Identity=34.1463414634146, Blast_Score=179, Evalue=7e-45, Organism=Drosophila melanogaster, GI221372266, Length=685, Percent_Identity=23.5036496350365, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI221372263, Length=685, Percent_Identity=23.5036496350365, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI45551475, Length=685, Percent_Identity=23.5036496350365, Blast_Score=155, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 - InterPro: IPR002469 [H]
Pfam domain/function: PF00930 DPPIV_N; PF00326 Peptidase_S9 [H]
EC number: =3.4.14.12 [H]
Molecular weight: Translated: 83269; Mature: 83269
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLSIFIILFFCLLTVGAQQVSLQDVANRTYHAEGIRGIKPMLDGEHYTQMSADGKKII CCEEHHHHHHHHHHHHCCCCCEEHHHHHCCCEECCCCCCCCCCCCCCHHEECCCCCCEEE QYSFKTGKETGTIFDVNTARDCSIKSFDDYIMSPDEKLILIQTETKPIYRRSFTANYYIF EEEECCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEEE NVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRDNNIYLVKLLFGNSESQVTKDGKFNEVL EECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHH NGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMYSFPLYKGMVPALEKFSTYPG HCCCCHHEHHCCCCCEEECCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCC EYEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNR CEEEECCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECC HQNRFDLYFANPRSTLCKLMVRDEAPQYIKEEAYSNIVFYPKNFVVMSEKDGYNHLYLYT CCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEEEECCCCCCEEEEEE SGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTKLSKQEG CCCHHHHHHHCCCCEEEHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCC THKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKHQVSRLNMPNKELF CEEEEHCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCHHHE SFKTNDGVELNGWIMKPANFNPNKKYPVIMHQYSGPGSQEVADKWGIGARRDGGMFEAYM EEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEE AGQGFIMACVDGRGTGGRGSDFEKCTYLSLGVKESKDQVEAAKYLSTLPYVDGNRIGIWG CCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEE WSYGGYNTLMSMSEGTPIFKAGVAVAAPTDWRFYDSVYTERFMRTPKENMEGYNAASAIN ECCCCHHHHEECCCCCCEEECCEEEECCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHH RANKLNGELLLIHGTADDNVHLRNNAEYSEALVQADKQFDMQIYTNRNHGISGGNTTKHL HHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH LTRVANFFIDNLK HHHHHHHHHHCCC >Mature Secondary Structure MRKLSIFIILFFCLLTVGAQQVSLQDVANRTYHAEGIRGIKPMLDGEHYTQMSADGKKII CCEEHHHHHHHHHHHHCCCCCEEHHHHHCCCEECCCCCCCCCCCCCCHHEECCCCCCEEE QYSFKTGKETGTIFDVNTARDCSIKSFDDYIMSPDEKLILIQTETKPIYRRSFTANYYIF EEEECCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEEEEEEEEEE NVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRDNNIYLVKLLFGNSESQVTKDGKFNEVL EECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHH NGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMYSFPLYKGMVPALEKFSTYPG HCCCCHHEHHCCCCCEEECCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCC EYEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNR CEEEECCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECC HQNRFDLYFANPRSTLCKLMVRDEAPQYIKEEAYSNIVFYPKNFVVMSEKDGYNHLYLYT CCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCEEEEECCCCCCEEEEEE SGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTKLSKQEG CCCHHHHHHHCCCCEEEHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCC THKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKHQVSRLNMPNKELF CEEEEHCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCHHHE SFKTNDGVELNGWIMKPANFNPNKKYPVIMHQYSGPGSQEVADKWGIGARRDGGMFEAYM EEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEE AGQGFIMACVDGRGTGGRGSDFEKCTYLSLGVKESKDQVEAAKYLSTLPYVDGNRIGIWG CCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEE WSYGGYNTLMSMSEGTPIFKAGVAVAAPTDWRFYDSVYTERFMRTPKENMEGYNAASAIN ECCCCHHHHEECCCCCCEEECCEEEECCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHH RANKLNGELLLIHGTADDNVHLRNNAEYSEALVQADKQFDMQIYTNRNHGISGGNTTKHL HHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH LTRVANFFIDNLK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA