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The map label for this gene is yohF [C]

Identifier: 150004516

GI number: 150004516

Start: 2547118

End: 2547978

Strand: Direct

Name: yohF [C]

Synonym: BVU_1966

Alternate gene names: 150004516

Gene position: 2547118-2547978 (Clockwise)

Preceding gene: 150004515

Following gene: 150004518

Centisome position: 49.33

GC content: 44.13

Gene sequence:

>861_bases
ATGAGTAAATTAGCCATAATAACCGGTGCCGATGGAGGAATGGGAACCGAAATAACCCGTGCGGTAGCACAGGCCGGTTA
TCATGTAATTATGTTGTGCTACACTCTTTTCAAAGGAGAGGAGCGTAAGAACCAGTTGATTTTGGAAACAGGCAATAAAG
AGATAGAAGTCAGACAGGTTGACCTTTCTTCTATGGCTTCTGTGACTAATATCGCAGAAGATTTGTTGGGGCGTGGAAAA
CATATCGACTTACTGATGAACAATGCGGGAACCATGAGTTCCGGAGGTTTGATTACAACGGAGGATGGTTTGGAATATAC
GGTAGCCGTGAACTATGTGGCCCCTTTTTTACTGACCTTGAAATTATTACCTCTGATGGGGCAGGGAACCCGGATTGTGA
ACATGGTTTCTTGTACGTATTCCATAGGGAAGATTACTCCTGAATTTTTTGTTCGTGGAAAGAGAGGAAGTTTTTGGCGT
ATCCCTGTTTACAGCAATACAAAGTTGGCTTTGTGGCTTTTTACCCGTGAACTTTCTGAAAGGCTGAAAGCAGAGGGAAT
CACCGTCAATGCTGCCGATCCCGGTATTGTTTCTACCAATATCATCCGTATGGATATGTGGTTTGATCCGTTGACCGACA
TACTGTTCCGTCCTTGTATCCGTACTCCGAAGCAAGGAGCTGCGACAGCTGTCAGTTTGCTTTTGGATGAGCGATGGAAA
GAAGTTACAGGACAGATGTTTGCTTCTTGCAAGCCTAAAAAAGTAAAGGATAAGTTTATGAATCATCCGCAGGCAAGACA
GCTTTGGGCGGATACGAAAGCATATTTGGAGAAACTGAAATTGGAGGAGCCAATTGGCTGA

Upstream 100 bases:

>100_bases
GCATTGCGAGAATGTACACTATTGATATGGCATGCCACAAACATTTGGAAGAGAAATTGCCCCTTTGCTTGGAACGTGAA
ATAGAAAAATTAGAGAACCA

Downstream 100 bases:

>100_bases
GAATTCCTTTAAATACATAAAAGCCGTATCGTTACTCAAAAGTAGAGTGGATACGGCTTTTATGGTCGGTGAAGAGTGTC
TGGTTTCGGATTGCAGTGTA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSKLAIITGADGGMGTEITRAVAQAGYHVIMLCYTLFKGEERKNQLILETGNKEIEVRQVDLSSMASVTNIAEDLLGRGK
HIDLLMNNAGTMSSGGLITTEDGLEYTVAVNYVAPFLLTLKLLPLMGQGTRIVNMVSCTYSIGKITPEFFVRGKRGSFWR
IPVYSNTKLALWLFTRELSERLKAEGITVNAADPGIVSTNIIRMDMWFDPLTDILFRPCIRTPKQGAATAVSLLLDERWK
EVTGQMFASCKPKKVKDKFMNHPQARQLWADTKAYLEKLKLEEPIG

Sequences:

>Translated_286_residues
MSKLAIITGADGGMGTEITRAVAQAGYHVIMLCYTLFKGEERKNQLILETGNKEIEVRQVDLSSMASVTNIAEDLLGRGK
HIDLLMNNAGTMSSGGLITTEDGLEYTVAVNYVAPFLLTLKLLPLMGQGTRIVNMVSCTYSIGKITPEFFVRGKRGSFWR
IPVYSNTKLALWLFTRELSERLKAEGITVNAADPGIVSTNIIRMDMWFDPLTDILFRPCIRTPKQGAATAVSLLLDERWK
EVTGQMFASCKPKKVKDKFMNHPQARQLWADTKAYLEKLKLEEPIG
>Mature_285_residues
SKLAIITGADGGMGTEITRAVAQAGYHVIMLCYTLFKGEERKNQLILETGNKEIEVRQVDLSSMASVTNIAEDLLGRGKH
IDLLMNNAGTMSSGGLITTEDGLEYTVAVNYVAPFLLTLKLLPLMGQGTRIVNMVSCTYSIGKITPEFFVRGKRGSFWRI
PVYSNTKLALWLFTRELSERLKAEGITVNAADPGIVSTNIIRMDMWFDPLTDILFRPCIRTPKQGAATAVSLLLDERWKE
VTGQMFASCKPKKVKDKFMNHPQARQLWADTKAYLEKLKLEEPIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI186928839, Length=269, Percent_Identity=35.6877323420074, Blast_Score=147, Evalue=8e-36,
Organism=Homo sapiens, GI166795268, Length=275, Percent_Identity=34.5454545454545, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI10190746, Length=296, Percent_Identity=33.7837837837838, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI146231950, Length=275, Percent_Identity=32, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI225579078, Length=277, Percent_Identity=31.0469314079422, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI7706523, Length=276, Percent_Identity=28.2608695652174, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI19923931, Length=231, Percent_Identity=31.6017316017316, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI193804850, Length=279, Percent_Identity=28.673835125448, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788459, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082160, Length=202, Percent_Identity=26.2376237623762, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17558006, Length=258, Percent_Identity=31.0077519379845, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17532791, Length=260, Percent_Identity=30.7692307692308, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193207620, Length=258, Percent_Identity=31.3953488372093, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17532805, Length=284, Percent_Identity=28.169014084507, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI72001364, Length=286, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71992402, Length=254, Percent_Identity=26.7716535433071, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17535059, Length=256, Percent_Identity=26.171875, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17505416, Length=285, Percent_Identity=23.859649122807, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI32565532, Length=216, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=205, Percent_Identity=30.7317073170732, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24586328, Length=275, Percent_Identity=37.8181818181818, Blast_Score=160, Evalue=9e-40,
Organism=Drosophila melanogaster, GI28573296, Length=283, Percent_Identity=35.3356890459364, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI22024069, Length=287, Percent_Identity=34.8432055749129, Blast_Score=144, Evalue=8e-35,
Organism=Drosophila melanogaster, GI19921754, Length=280, Percent_Identity=34.2857142857143, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI161076371, Length=286, Percent_Identity=33.2167832167832, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24647946, Length=294, Percent_Identity=30.6122448979592, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI45553409, Length=294, Percent_Identity=30.6122448979592, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24647948, Length=294, Percent_Identity=30.6122448979592, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI20129347, Length=262, Percent_Identity=29.7709923664122, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI45554248, Length=276, Percent_Identity=32.2463768115942, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24640117, Length=276, Percent_Identity=32.2463768115942, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24647931, Length=307, Percent_Identity=30.2931596091205, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24656154, Length=244, Percent_Identity=31.9672131147541, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI19922628, Length=244, Percent_Identity=31.9672131147541, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007236, Length=205, Percent_Identity=25.3658536585366, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31841; Mature: 31709

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLAIITGADGGMGTEITRAVAQAGYHVIMLCYTLFKGEERKNQLILETGNKEIEVRQV
CCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEE
DLSSMASVTNIAEDLLGRGKHIDLLMNNAGTMSSGGLITTEDGLEYTVAVNYVAPFLLTL
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHH
KLLPLMGQGTRIVNMVSCTYSIGKITPEFFVRGKRGSFWRIPVYSNTKLALWLFTRELSE
HHHHCCCCCCEEEEEEEHHHHHHCCCHHHEEECCCCCEEEEEEECCCEEEEEHHHHHHHH
RLKAEGITVNAADPGIVSTNIIRMDMWFDPLTDILFRPCIRTPKQGAATAVSLLLDERWK
HHHHCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EVTGQMFASCKPKKVKDKFMNHPQARQLWADTKAYLEKLKLEEPIG
HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKLAIITGADGGMGTEITRAVAQAGYHVIMLCYTLFKGEERKNQLILETGNKEIEVRQV
CCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEE
DLSSMASVTNIAEDLLGRGKHIDLLMNNAGTMSSGGLITTEDGLEYTVAVNYVAPFLLTL
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHH
KLLPLMGQGTRIVNMVSCTYSIGKITPEFFVRGKRGSFWRIPVYSNTKLALWLFTRELSE
HHHHCCCCCCEEEEEEEHHHHHHCCCHHHEEECCCCCEEEEEEECCCEEEEEHHHHHHHH
RLKAEGITVNAADPGIVSTNIIRMDMWFDPLTDILFRPCIRTPKQGAATAVSLLLDERWK
HHHHCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EVTGQMFASCKPKKVKDKFMNHPQARQLWADTKAYLEKLKLEEPIG
HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]