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The map label for this gene is exbB [C]

Identifier: 150004492

GI number: 150004492

Start: 2522782

End: 2523555

Strand: Direct

Name: exbB [C]

Synonym: BVU_1942

Alternate gene names: 150004492

Gene position: 2522782-2523555 (Clockwise)

Preceding gene: 150004491

Following gene: 150004493

Centisome position: 48.86

GC content: 39.53

Gene sequence:

>774_bases
ATGAAAAAGTTATTTGCAATTCTTGCAGTGATGGGAGTCCTTACTTTAGGATCAGTTCAGCCTGTTATGGCTCAAGACGC
AGCTCCGGCTCAAACAGAACAGACTACTGAAGCAGCAGTGGTTGAAGAAGGTGGTGGTCTTCACAAAGAGTTAAAAACCA
AATTTATTGAAGGTGATGCCAGCTTCATGTCATTGGTAGCTATCGCATTGGTTTTAGGTTTGGCTTTCTGTATTGAACGT
ATCATTTATTTGAGCTTGGCTGAAACGAATACAAAGAAGTTGATGGCTAACATTGAGGCTGCTTTGGAAAAAGGTGATGT
TGAAGCTGCTAAAACTGTATGTCGCAATACTCGTGGTCCGGTCGCTTCTATTTGTTATCAAGGCTTGATGAGAATAGATG
AAGGTATTGATGTAGTAGAACGTTCAGTTGTTTCTTACGGTGGAGTTCAAGCCGGTTATTTGGAAAAAGGATGTTCTTGG
ATTACATTGTTCATCGCAATGGCTCCGTCTTTGGGATTCTTGGGTACTGTAATCGGTATGGTTATGGCGTTCGATAAGAT
TCAGCAGGCTGGTGATATTTCTCCGACAGTTGTAGCTGGTGGTATGAAAGTGGCTTTGATTACTACTATCTTCGGTTTGG
TTGTAGCATTGATTCTTCAGGTATTCTATAACTACATCCTTTCTAAGATTGAAGGTTTGACAAGTGAAATGGAAGACTCT
TCTATCACTTTGTTGGATATGATCACTAAATATAACTTGAAATACAAAAAATAA

Upstream 100 bases:

>100_bases
CCCGCTCTCTCCGCATTGTAATGGAAAGCACAACAGACTGGAAGACAATTAAAACAAATAAATAACAATTAATTAATTAA
TCTTAAAAATTAGACACACA

Downstream 100 bases:

>100_bases
TTAGGAGATGGCTAAGTTATCATATAAAGTGTCTTACTACATAATGTACATTTGCTTTGCGCTGATTCTTGTCGTGCTGG
GAATGTTCTATTTTGTAGGA

Product: putative biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKLFAILAVMGVLTLGSVQPVMAQDAAPAQTEQTTEAAVVEEGGGLHKELKTKFIEGDASFMSLVAIALVLGLAFCIER
IIYLSLAETNTKKLMANIEAALEKGDVEAAKTVCRNTRGPVASICYQGLMRIDEGIDVVERSVVSYGGVQAGYLEKGCSW
ITLFIAMAPSLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSKIEGLTSEMEDS
SITLLDMITKYNLKYKK

Sequences:

>Translated_257_residues
MKKLFAILAVMGVLTLGSVQPVMAQDAAPAQTEQTTEAAVVEEGGGLHKELKTKFIEGDASFMSLVAIALVLGLAFCIER
IIYLSLAETNTKKLMANIEAALEKGDVEAAKTVCRNTRGPVASICYQGLMRIDEGIDVVERSVVSYGGVQAGYLEKGCSW
ITLFIAMAPSLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSKIEGLTSEMEDS
SITLLDMITKYNLKYKK
>Mature_257_residues
MKKLFAILAVMGVLTLGSVQPVMAQDAAPAQTEQTTEAAVVEEGGGLHKELKTKFIEGDASFMSLVAIALVLGLAFCIER
IIYLSLAETNTKKLMANIEAALEKGDVEAAKTVCRNTRGPVASICYQGLMRIDEGIDVVERSVVSYGGVQAGYLEKGCSW
ITLFIAMAPSLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSKIEGLTSEMEDS
SITLLDMITKYNLKYKK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27565; Mature: 27565

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFAILAVMGVLTLGSVQPVMAQDAAPAQTEQTTEAAVVEEGGGLHKELKTKFIEGDA
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
SFMSLVAIALVLGLAFCIERIIYLSLAETNTKKLMANIEAALEKGDVEAAKTVCRNTRGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
VASICYQGLMRIDEGIDVVERSVVSYGGVQAGYLEKGCSWITLFIAMAPSLGFLGTVIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSKIEGLTSEMEDS
HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SITLLDMITKYNLKYKK
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLFAILAVMGVLTLGSVQPVMAQDAAPAQTEQTTEAAVVEEGGGLHKELKTKFIEGDA
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
SFMSLVAIALVLGLAFCIERIIYLSLAETNTKKLMANIEAALEKGDVEAAKTVCRNTRGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
VASICYQGLMRIDEGIDVVERSVVSYGGVQAGYLEKGCSWITLFIAMAPSLGFLGTVIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSKIEGLTSEMEDS
HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SITLLDMITKYNLKYKK
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]