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The map label for this gene is ydiP [C]

Identifier: 150004451

GI number: 150004451

Start: 2471336

End: 2472196

Strand: Reverse

Name: ydiP [C]

Synonym: BVU_1899

Alternate gene names: 150004451

Gene position: 2472196-2471336 (Counterclockwise)

Preceding gene: 150004452

Following gene: 150004450

Centisome position: 47.88

GC content: 32.4

Gene sequence:

>861_bases
ATGTTATATAAGGAATTTGAAAAGAATAGAGAAGATATATTAGAGAATGAATTTTGCATGCAATCTAATGCATCAACATT
GCCCATTACAGATTGCCCTTCTTATACCCCTATATGTACTATTGGAATCTGTATACAAGGAAATGCTAAAATAAGAATGG
ATTCTCAAGAATATACTATACACCCACATGATGTTTTTGTCTTTATGCCGGGACTGCTAGTCTCAGTCATAGAGACAAGT
CCTCATTTCACAACAAACTATTTTACACTTTCAAACACATTTTTCTATGATGTAATAAAAACTATCAGGAGTTTTTCTCC
TCAATTTTTCTCTTACATGAAATCTCGTTTCCTTTATCCCTTGCCGGAACAAGAGATGCAGTATTTCATGAATTATTATA
CGTTACTGAAGAGTCGGATCAAACTTCCCAAAAGTTTTTCCAGAGAAGCAATTATAGCTCTGCTAAGAATTATATTCCTA
GATTTATATAACGATTTTGAAAATTACATCAATCATAGAAATAATACAAGTACAACACGTAAAGAAGATTTAACGCATAG
ATTCTATACGCTAATGATGGACAACTACAGAGAGCATAAAGAGGTTATCTTTTATGCCGACAAACTTCATGTTTCTTCCA
AATATCTGTCTGAAGTAGTTAAAGAAACCAGTGGAAAATCTCCTAAGGACTGGATTATAGATTATTCATTACTGGAGATA
AAAGAATTATTGAAAAACAGTTCTCTTAATATTCAGGAAATAACAATCAGAACTAAGTTCCTGAACCAGTCTGCTTTAGG
TCGTTTTTTTAAAAGACACACCAATATGTCTCCCTCTGAATATAGGGAATCGACTTATTAG

Upstream 100 bases:

>100_bases
TAAAGCACCTTTTTTCCGTAAAATTGTTCCTAAATACCATTGATCAACTTTTCAATGCTTCAGAAACCCTATTTTTGCAT
TATATAATTGGTTGGTATAA

Downstream 100 bases:

>100_bases
TTTCATCAATACCTTGCATAAAAAGATGCACTTTTAATGTAAAAAAGTACAGAGAATATTTGCAAATACCAAAAAAAGCC
GTACCTTTGCATCCGCAATT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; AraC-Type Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Phosphomethylpyrimidine Kinase; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; AraC-Family Regulatory Protein; Transcription Regulator AraC-Type; Bacterial Regulatory Helix-Turn-Helix Protein; AraC-Type Transcriptional Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC/XylS Family Transcriptional Regulator; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLYKEFEKNREDILENEFCMQSNASTLPITDCPSYTPICTIGICIQGNAKIRMDSQEYTIHPHDVFVFMPGLLVSVIETS
PHFTTNYFTLSNTFFYDVIKTIRSFSPQFFSYMKSRFLYPLPEQEMQYFMNYYTLLKSRIKLPKSFSREAIIALLRIIFL
DLYNDFENYINHRNNTSTTRKEDLTHRFYTLMMDNYREHKEVIFYADKLHVSSKYLSEVVKETSGKSPKDWIIDYSLLEI
KELLKNSSLNIQEITIRTKFLNQSALGRFFKRHTNMSPSEYRESTY

Sequences:

>Translated_286_residues
MLYKEFEKNREDILENEFCMQSNASTLPITDCPSYTPICTIGICIQGNAKIRMDSQEYTIHPHDVFVFMPGLLVSVIETS
PHFTTNYFTLSNTFFYDVIKTIRSFSPQFFSYMKSRFLYPLPEQEMQYFMNYYTLLKSRIKLPKSFSREAIIALLRIIFL
DLYNDFENYINHRNNTSTTRKEDLTHRFYTLMMDNYREHKEVIFYADKLHVSSKYLSEVVKETSGKSPKDWIIDYSLLEI
KELLKNSSLNIQEITIRTKFLNQSALGRFFKRHTNMSPSEYRESTY
>Mature_286_residues
MLYKEFEKNREDILENEFCMQSNASTLPITDCPSYTPICTIGICIQGNAKIRMDSQEYTIHPHDVFVFMPGLLVSVIETS
PHFTTNYFTLSNTFFYDVIKTIRSFSPQFFSYMKSRFLYPLPEQEMQYFMNYYTLLKSRIKLPKSFSREAIIALLRIIFL
DLYNDFENYINHRNNTSTTRKEDLTHRFYTLMMDNYREHKEVIFYADKLHVSSKYLSEVVKETSGKSPKDWIIDYSLLEI
KELLKNSSLNIQEITIRTKFLNQSALGRFFKRHTNMSPSEYRESTY

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34055; Mature: 34055

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKEFEKNREDILENEFCMQSNASTLPITDCPSYTPICTIGICIQGNAKIRMDSQEYTI
CCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCEEE
HPHDVFVFMPGLLVSVIETSPHFTTNYFTLSNTFFYDVIKTIRSFSPQFFSYMKSRFLYP
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LPEQEMQYFMNYYTLLKSRIKLPKSFSREAIIALLRIIFLDLYNDFENYINHRNNTSTTR
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KEDLTHRFYTLMMDNYREHKEVIFYADKLHVSSKYLSEVVKETSGKSPKDWIIDYSLLEI
HHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KELLKNSSLNIQEITIRTKFLNQSALGRFFKRHTNMSPSEYRESTY
HHHHCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MLYKEFEKNREDILENEFCMQSNASTLPITDCPSYTPICTIGICIQGNAKIRMDSQEYTI
CCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCEEE
HPHDVFVFMPGLLVSVIETSPHFTTNYFTLSNTFFYDVIKTIRSFSPQFFSYMKSRFLYP
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LPEQEMQYFMNYYTLLKSRIKLPKSFSREAIIALLRIIFLDLYNDFENYINHRNNTSTTR
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KEDLTHRFYTLMMDNYREHKEVIFYADKLHVSSKYLSEVVKETSGKSPKDWIIDYSLLEI
HHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KELLKNSSLNIQEITIRTKFLNQSALGRFFKRHTNMSPSEYRESTY
HHHHCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA