| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is gpmA [H]
Identifier: 150004448
GI number: 150004448
Start: 2468117
End: 2468878
Strand: Reverse
Name: gpmA [H]
Synonym: BVU_1895
Alternate gene names: 150004448
Gene position: 2468878-2468117 (Counterclockwise)
Preceding gene: 150004450
Following gene: 150004447
Centisome position: 47.82
GC content: 39.5
Gene sequence:
>762_bases ATGAAAAGAATCGTATTACTCCGCCATGGAGAAAGTACTTGGAACAAAGACAACCGTTTTACAGGATGGACAGATGTAGA TTTAACCGAAAAAGGTATCGCTGATGCCAACCAAGCAGGTATACTCTTAAAAGAAAAAGGATTTCATTTTGATAAAGCTT ACACTTCTTTTTTAAAGCGTGCGGTCAAAACATTAAACTGTGTCCTAGATAAAATGGATCAAGACTGGATACCTGTAGAG AAAAGTTGGCGCCTAAATGAGAAACATTATGGCGCATTGCAAGGATTAAACAAAAGCGAAACAGCTTCTAAATACGGAGA AGAACAAGTCTTGATATGGCGCCGTAGTTTTAACGTAGCCCCCAATGCCCTACCGGAAGATGATCCGCGCAATCCGAAAA CAGATACCCGTTATAAAGAAGTTCCTGACAAAGATCTTCCACGTACCGAATCTCTGAAAGAAACAGTAGAACGTATATTA CCTTATTGGAAATGCATCATCTTCCCCAATCTAGCTACAGCAAACGAACTGCTGGTAGTAGCTCACGGAAACAGCCTCAG AGGAATTATTAAATATTTGAAACATATACCGGATGAGGAAATTGTAGGTCTTAATCTACCTACTGCTGTTCCGTATGTAT TCGAGTTTGATAATGACCTGAATTTGAAGAAAGACTACTTTTTGGGAGATCCGGAAAAAATAAAAAAACTAATGGAAGCT GTAGCCGATCAAGGAAAAACCAACCCCGGTGGCAGGAAATAA
Upstream 100 bases:
>100_bases GTTAAATTCATAATTAATGGGTATTGATAAGTATGTATGCTACAACTAATTTTGCCGCCAACAGAAAATGTATTACCGGG TAATAAAGAAAGGAGAACAA
Downstream 100 bases:
>100_bases TTTTCCTGCGCTGTCCGAAACCTCCATCACAGAATGGAGAATACATCAAAATAGTGTTTTCAATAGTGCATTCAAACGCA ATCATACGCTTTTATACTAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKRIVLLRHGESTWNKDNRFTGWTDVDLTEKGIADANQAGILLKEKGFHFDKAYTSFLKRAVKTLNCVLDKMDQDWIPVE KSWRLNEKHYGALQGLNKSETASKYGEEQVLIWRRSFNVAPNALPEDDPRNPKTDTRYKEVPDKDLPRTESLKETVERIL PYWKCIIFPNLATANELLVVAHGNSLRGIIKYLKHIPDEEIVGLNLPTAVPYVFEFDNDLNLKKDYFLGDPEKIKKLMEA VADQGKTNPGGRK
Sequences:
>Translated_253_residues MKRIVLLRHGESTWNKDNRFTGWTDVDLTEKGIADANQAGILLKEKGFHFDKAYTSFLKRAVKTLNCVLDKMDQDWIPVE KSWRLNEKHYGALQGLNKSETASKYGEEQVLIWRRSFNVAPNALPEDDPRNPKTDTRYKEVPDKDLPRTESLKETVERIL PYWKCIIFPNLATANELLVVAHGNSLRGIIKYLKHIPDEEIVGLNLPTAVPYVFEFDNDLNLKKDYFLGDPEKIKKLMEA VADQGKTNPGGRK >Mature_253_residues MKRIVLLRHGESTWNKDNRFTGWTDVDLTEKGIADANQAGILLKEKGFHFDKAYTSFLKRAVKTLNCVLDKMDQDWIPVE KSWRLNEKHYGALQGLNKSETASKYGEEQVLIWRRSFNVAPNALPEDDPRNPKTDTRYKEVPDKDLPRTESLKETVERIL PYWKCIIFPNLATANELLVVAHGNSLRGIIKYLKHIPDEEIVGLNLPTAVPYVFEFDNDLNLKKDYFLGDPEKIKKLMEA VADQGKTNPGGRK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=248, Percent_Identity=50, Blast_Score=260, Evalue=7e-70, Organism=Homo sapiens, GI4505753, Length=248, Percent_Identity=50.4032258064516, Blast_Score=253, Evalue=1e-67, Organism=Homo sapiens, GI71274132, Length=248, Percent_Identity=48.3870967741936, Blast_Score=237, Evalue=8e-63, Organism=Homo sapiens, GI4502445, Length=250, Percent_Identity=46, Blast_Score=236, Evalue=1e-62, Organism=Homo sapiens, GI40353764, Length=250, Percent_Identity=46, Blast_Score=236, Evalue=1e-62, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=51.5527950310559, Blast_Score=170, Evalue=1e-42, Organism=Escherichia coli, GI1786970, Length=247, Percent_Identity=56.2753036437247, Blast_Score=295, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=49.1869918699187, Blast_Score=239, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324516, Length=300, Percent_Identity=31, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6320183, Length=301, Percent_Identity=29.2358803986711, Blast_Score=122, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6324857, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24646216, Length=249, Percent_Identity=50.2008032128514, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI85725270, Length=249, Percent_Identity=49.3975903614458, Blast_Score=243, Evalue=6e-65, Organism=Drosophila melanogaster, GI85725272, Length=249, Percent_Identity=49.3975903614458, Blast_Score=243, Evalue=6e-65, Organism=Drosophila melanogaster, GI24650981, Length=249, Percent_Identity=49.3975903614458, Blast_Score=243, Evalue=6e-65, Organism=Drosophila melanogaster, GI24648979, Length=252, Percent_Identity=35.3174603174603, Blast_Score=160, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571817, Length=252, Percent_Identity=35.3174603174603, Blast_Score=160, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571815, Length=252, Percent_Identity=35.3174603174603, Blast_Score=160, Evalue=6e-40,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 29056; Mature: 29056
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVLLRHGESTWNKDNRFTGWTDVDLTEKGIADANQAGILLKEKGFHFDKAYTSFLKR CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH AVKTLNCVLDKMDQDWIPVEKSWRLNEKHYGALQGLNKSETASKYGEEQVLIWRRSFNVA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCC PNALPEDDPRNPKTDTRYKEVPDKDLPRTESLKETVERILPYWKCIIFPNLATANELLVV CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE AHGNSLRGIIKYLKHIPDEEIVGLNLPTAVPYVFEFDNDLNLKKDYFLGDPEKIKKLMEA ECCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH VADQGKTNPGGRK HHHCCCCCCCCCC >Mature Secondary Structure MKRIVLLRHGESTWNKDNRFTGWTDVDLTEKGIADANQAGILLKEKGFHFDKAYTSFLKR CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH AVKTLNCVLDKMDQDWIPVEKSWRLNEKHYGALQGLNKSETASKYGEEQVLIWRRSFNVA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCC PNALPEDDPRNPKTDTRYKEVPDKDLPRTESLKETVERILPYWKCIIFPNLATANELLVV CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE AHGNSLRGIIKYLKHIPDEEIVGLNLPTAVPYVFEFDNDLNLKKDYFLGDPEKIKKLMEA ECCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH VADQGKTNPGGRK HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA