| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004357
Identifier: 150004357
GI number: 150004357
Start: 2329437
End: 2330984
Strand: Direct
Name: 150004357
Synonym: BVU_1803
Alternate gene names: NA
Gene position: 2329437-2330984 (Clockwise)
Preceding gene: 150004356
Following gene: 150004358
Centisome position: 45.12
GC content: 40.89
Gene sequence:
>1548_bases ATGGTTACATTAAAATCGTTTTTAGGTATGATTGCCGCAGTTCCTTTTATAATGGCGTGTAATCAGACAGGGCAGGTCAA TGCAACACTTTTTCCTGCTTCCGGTTCGGAAAATGTCAATCCGGACACTCATTTGGTTCTTACTTTTTCCGAAACTCCTG TCCTTGGAGATTCCGGTATGATACGGGTTTATGACGCAGTTACTGACCAAGTGGTGGACAGTTTGGATTTGAGTATTCCG TCTGGTCCTACGGAGAGCCGTACGTATGGTCCGGAATGTGATTATACAAAAGTGCCTTATGACTATACTCGTACCGTTAT GCCTACCAATAAAGATACTCGTCCGGGTACTCCTTCGGGAACGGCGGAACCTACTCCTCCTGTGTACCAGCTTACTATTA TAGGGGGATTTACGGATGCCTTTCATTTTTATCCCGTCATCGTGCGTGATTCTATAGCTACTATTTATCTACACAATAAT ATGCTGGAATATGGGCATACTTACTATGTGACTATAGATAATGGTGTGTTAAATTTAGCTGATGGCAGTTTTCAAGGAGT CACTAAAGAAGATGAGTGGATTTTCACTACTAAATCTGACATGCCGGAACTTTCAGATACATTGATTGTGGATGTTGCAG GAAAAGGAGACTTTAATACAGTTCAGGGAGCCTTGGATTTTATTCCTGATTTTAATGAACAACAGACTGTGATTTTAGTT AATCCCGGTGATTATGAAGAATTGGTCTATACAAGAAATAAATGGAATGTTAAAATTAAAGGAGCAGGAATGACCGATAC TAAAGTACATTATGCAAATAATGAAGTCTTTAATCCTCATCCGCTGACTGTGAAAACCAATGAGTGGCCCGGTACATTTC CTTCCCGTCGGGCGGCTTTCATGCTTGATAATTGCAAGGATATAGTCATTGAGGATATGACCATTGCTACAGATTTAAAA GGTCAGGCAGAAGGGTTGTTGATTAATGGAGAAAGGATTGCTTTATACCGTGTACATATTATAGGTTCAGGAGATGCATT GCAGGCGAATGGAACAATCTATATGGAATCTTGTGAGTTGGATGGTGGTGGTGATACTATTTTAGGACGTGGCAGCTTGT TTGCTTATAAAAGTAATTTCCGTAATGGTGGCGGCCCTTTCTCATGGGTAAGAAATACGGCGGGCAATCATGGTAATGTG TTTGTTGAATGCACTTTTTCTACGGAGGATGGTAAACAGGCGGATTACGGACGTACTAAAAGTAACCACGGTTCGGCCTA TCCTGATGCAGAGTTTGTCTTGATAGATTGTAAAGTGAAAAATATAATTCCTGAAGGCTGGAGTTCTATTGGAGCGAAGA CTGCTAAAATGTACGAGTATAATACTTGTGATATGGTGACAGGAAATCCGGTTGATGTATCCAAACGTCATCCATATTCC CGCCAGCTGACAAAAGATAAAGATACAGAGCTGATTAACAATTATCGGAACCCTGCTTTTGTTTTGAAAGGCTGGGTGCC GGATAGTTGTATAAATGGGACGAAGTAA
Upstream 100 bases:
>100_bases AGCATACGGGCAGTTGTGGTGAAAGTACAACGATGCTGCATTATATGAAGGTGGAATGGGAATAGAATGATTAAGACTTG AATTTAATACTGATGAATCT
Downstream 100 bases:
>100_bases TAATTAGTGGAGATAAGTTTGCGCATCGAATATTGAGGTATCTAATTAAATATCGGAAACAGATATGGATGATCTATTAA AGTTGGAAACAGAAACTTTT
Product: carbohydrate esterase family 8 protein
Products: NA
Alternate protein names: Carbohydrate Esterase Family 8 Protein; Pectin Methylesterase Pme8A; Alpha/Beta Superfamily Hydrolase; Pectin Methylesterase-Like
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK
Sequences:
>Translated_515_residues MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK >Mature_515_residues MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56681; Mature: 56681
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGM CEEHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCE IRVYDAVTDQVVDSLDLSIPSGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSG EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC TAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNNMLEYGHTYYVTIDNGVLNLA CCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEEEEECCEECCCCEEEEEECCCEEEEC DGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEE NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAF CCCCCHHEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE MLDNCKDIVIEDMTIATDLKGQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCEL EECCCCEEEEECEEEEECCCCCCCEEEEECCEEEEEEEEEEECCCEEEECCEEEEEEEEC DGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNVFVECTFSTEDGKQADYGRTK CCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC SNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS CCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCEECCCCCCCCCCCCCH RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK HCCCCCCCHHHHHCCCCCEEEEECCCCCHHCCCCC >Mature Secondary Structure MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGM CEEHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCE IRVYDAVTDQVVDSLDLSIPSGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSG EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC TAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNNMLEYGHTYYVTIDNGVLNLA CCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEEEEECCEECCCCEEEEEECCCEEEEC DGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEE NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAF CCCCCHHEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE MLDNCKDIVIEDMTIATDLKGQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCEL EECCCCEEEEECEEEEECCCCCCCEEEEECCEEEEEEEEEEECCCEEEECCEEEEEEEEC DGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNVFVECTFSTEDGKQADYGRTK CCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC SNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS CCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCEECCCCCCCCCCCCCH RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK HCCCCCCCHHHHHCCCCCEEEEECCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA