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The map label for this gene is kduI2 [H]

Identifier: 150004349

GI number: 150004349

Start: 2313405

End: 2314367

Strand: Reverse

Name: kduI2 [H]

Synonym: BVU_1795

Alternate gene names: 150004349

Gene position: 2314367-2313405 (Counterclockwise)

Preceding gene: 150004350

Following gene: 150004348

Centisome position: 44.82

GC content: 42.68

Gene sequence:

>963_bases
ATGATTATGAAAAAATTAGCGATTGCAATGATGCTGAGTGTTTCTGCCTTGGCAGCTTCAGCTCAAGTAAATTACAAAGT
ACAGACCGCTTGCCATCCGCAAGATGTGAAACACTATGATACAGAACGTCTGCGTAGTTCATTTATGATGGAAAAGGTGA
TGGCGCCGGATGAGATCAATGTTACATACACCCTTTACGACCGTCTTATTTACGGAGGAGCTATGCCGGTAAACAAAATT
TTGAAGCTGGAAACTTTCCGTGAACTGGGTCCGGAAATCACTTACTTCCTTGAACGGCGTGAACTAGGAGTCATCAATGT
AGGCGGTGATGGCGTAGTTACTGTAGACGGTAAAGAATATCCTATGAAATACAAGGAAGCCCTCTATGTAGGTTGCGGGA
ATAAAGAAGTTACTTTTAAAAGTAATGACGCTGCCAAACCGGCTAAATTCTATATCAATTCGGCACCGGCTTACAAGCCA
TACGTTACTCAATTGATCACTACCGACGCCAAGCTTCAAAAAGCAAATCCTAAACAGTATGCTTTAGCTATCTCAGATCA
TTATGGAAAAATGGAAGATAGCAACGACCGTATTGTAAACCAGTTAATTGTAAAAGATGTATTGGAAAGAGTGAAAAACG
GTGGTACAAACCAATTACAGATGGGACTTACTGAACTGGCTCCGGGTTCTGTATGGAACACCATGCCGGCCCATACACAT
ACCCGTCGTATGGAAGCCTACTTCTATTTCAACCTGCCTGAAGGAAATGCCATTTGCCACCTGATGGGCGAACCGCAAGA
AGAGCGTCTGGTATGGTTACACAATGAACAAGCTATCACTTCTCCCGAATGGTCTATCCATGCCGCTGCAGGTACCAGCA
ACTATACCTTTATTTGGGGTATGGGAGGTGAAAACCTGAAATACAGTGACAAGGATGAAATAAAATACACAGATATGAGA
TAA

Upstream 100 bases:

>100_bases
TTCCGGAATTTTAGTACTGATAACACTATTCTTAATGGTGCTGAACCGTCGTTCTATCATTAAATACCAGAAAACAATGA
AAAATTAAAATTTAAAGATA

Downstream 100 bases:

>100_bases
GTAGAATGGTACACACCATTACTCATTAACTCTTGTCATTCTGAATGTTGCAAGAAATCAACTCGTTTTCAGTTTTTTTT
GCGACATTCAGAATGATTTT

Product: 5-keto-4-deoxyuronate isomerase

Products: NA

Alternate protein names: 5-keto-4-deoxyuronate isomerase 2; DKI isomerase 2 [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIMKKLAIAMMLSVSALAASAQVNYKVQTACHPQDVKHYDTERLRSSFMMEKVMAPDEINVTYTLYDRLIYGGAMPVNKI
LKLETFRELGPEITYFLERRELGVINVGGDGVVTVDGKEYPMKYKEALYVGCGNKEVTFKSNDAAKPAKFYINSAPAYKP
YVTQLITTDAKLQKANPKQYALAISDHYGKMEDSNDRIVNQLIVKDVLERVKNGGTNQLQMGLTELAPGSVWNTMPAHTH
TRRMEAYFYFNLPEGNAICHLMGEPQEERLVWLHNEQAITSPEWSIHAAAGTSNYTFIWGMGGENLKYSDKDEIKYTDMR

Sequences:

>Translated_320_residues
MIMKKLAIAMMLSVSALAASAQVNYKVQTACHPQDVKHYDTERLRSSFMMEKVMAPDEINVTYTLYDRLIYGGAMPVNKI
LKLETFRELGPEITYFLERRELGVINVGGDGVVTVDGKEYPMKYKEALYVGCGNKEVTFKSNDAAKPAKFYINSAPAYKP
YVTQLITTDAKLQKANPKQYALAISDHYGKMEDSNDRIVNQLIVKDVLERVKNGGTNQLQMGLTELAPGSVWNTMPAHTH
TRRMEAYFYFNLPEGNAICHLMGEPQEERLVWLHNEQAITSPEWSIHAAAGTSNYTFIWGMGGENLKYSDKDEIKYTDMR
>Mature_320_residues
MIMKKLAIAMMLSVSALAASAQVNYKVQTACHPQDVKHYDTERLRSSFMMEKVMAPDEINVTYTLYDRLIYGGAMPVNKI
LKLETFRELGPEITYFLERRELGVINVGGDGVVTVDGKEYPMKYKEALYVGCGNKEVTFKSNDAAKPAKFYINSAPAYKP
YVTQLITTDAKLQKANPKQYALAISDHYGKMEDSNDRIVNQLIVKDVLERVKNGGTNQLQMGLTELAPGSVWNTMPAHTH
TRRMEAYFYFNLPEGNAICHLMGEPQEERLVWLHNEQAITSPEWSIHAAAGTSNYTFIWGMGGENLKYSDKDEIKYTDMR

Specific function: Pectin degradation. [C]

COG id: COG3717

COG function: function code G; 5-keto 4-deoxyuronate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kduI family [H]

Homologues:

Organism=Escherichia coli, GI1789209, Length=296, Percent_Identity=48.6486486486487, Blast_Score=286, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR007045
- InterPro:   IPR021120 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: =5.3.1.17 [H]

Molecular weight: Translated: 36209; Mature: 36209

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKLAIAMMLSVSALAASAQVNYKVQTACHPQDVKHYDTERLRSSFMMEKVMAPDEIN
CCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCCE
VTYTLYDRLIYGGAMPVNKILKLETFRELGPEITYFLERRELGVINVGGDGVVTVDGKEY
EEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCEEEEECCCCC
PMKYKEALYVGCGNKEVTFKSNDAAKPAKFYINSAPAYKPYVTQLITTDAKLQKANPKQY
CCCEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHCCCCCCEE
ALAISDHYGKMEDSNDRIVNQLIVKDVLERVKNGGTNQLQMGLTELAPGSVWNTMPAHTH
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCH
TRRMEAYFYFNLPEGNAICHLMGEPQEERLVWLHNEQAITSPEWSIHAAAGTSNYTFIWG
HEEEEEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEE
MGGENLKYSDKDEIKYTDMR
CCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MIMKKLAIAMMLSVSALAASAQVNYKVQTACHPQDVKHYDTERLRSSFMMEKVMAPDEIN
CCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCCE
VTYTLYDRLIYGGAMPVNKILKLETFRELGPEITYFLERRELGVINVGGDGVVTVDGKEY
EEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCEEEEECCCCC
PMKYKEALYVGCGNKEVTFKSNDAAKPAKFYINSAPAYKPYVTQLITTDAKLQKANPKQY
CCCEEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHCCCCCCEE
ALAISDHYGKMEDSNDRIVNQLIVKDVLERVKNGGTNQLQMGLTELAPGSVWNTMPAHTH
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCH
TRRMEAYFYFNLPEGNAICHLMGEPQEERLVWLHNEQAITSPEWSIHAAAGTSNYTFIWG
HEEEEEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEE
MGGENLKYSDKDEIKYTDMR
CCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]