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The map label for this gene is nrdD [H]

Identifier: 150004213

GI number: 150004213

Start: 2136437

End: 2138713

Strand: Reverse

Name: nrdD [H]

Synonym: BVU_1654

Alternate gene names: 150004213

Gene position: 2138713-2136437 (Counterclockwise)

Preceding gene: 150004214

Following gene: 150004212

Centisome position: 41.42

GC content: 45.98

Gene sequence:

>2277_bases
ATGAATTACGCTGAGATTTGTATTATTAAGCGTGATGGAAAGCGGGAAGACTTTTCCATCAGTAAAATTAAAAATGCAAT
CGGCAAGGCATTCCATGCCTCCGGAATTGACAATGAAGACAAACTGATTGCTGAAATTACCATGCGGGTTATCAGCAATT
TCGTATCTCCAACCATCAGTGTGGAAGAGATTCAGGATCTGGTAGAAAAGGAACTGATGAAAGTACGTCCCGAAGTGGCC
AAGAAATATATTATTTATCGCGAATGGCGGAATACGGAACGCGACCGTAAAACGCAAATGAAGCACATCATGGACGGCAT
TGTAGCCATCGACAAAAATGATGTCAACCTGAGTAATGCCAACATGTCCAGCCATACTCCCGCCGGACAGATGATGACTT
TTGCCTCGGAAGTTACTAAAGACTATACCTATAAATACCTGTTGCCTAAAAAATATGCCGAAGCACATCAGTTGGGCGAC
ATACATATACATGATTTGGATTACTATCCCACCAAGACTACCACTTGTATCCAATATGACCTGGATGACTTGTTCGAACG
CGGCTTCCGCACTAAAAACGGAAGTATCCGTACTCCACAGTCCATTCAAAGTTATGCCACTCTGGCCACCATCATATTCC
AGACAAACCAGAACGAGCAACACGGCGGACAAGCTATTCCCGCCTTCGACTTCTTTATGGCGGAAGGGGTCCGGAAGACA
TTTCGCAAACATCTGAAAACTTTAACCGAGTTTTATATAGAAGTAGAGGGAAAAGAACCCGGAACAGAGGCTCTCAAGAA
AATTGAAGAGAAAGCATACGCCATGACGCGCAAAGATACACATCAGGCCATGGAAGGATTCATCCACAACCTGAACACCA
TGCATTCGCGAGGGGGAAACCAAGTCGTGTTCAGTTCCATCAATTATGGAACAGACACTTCTCCCGAAGGCCGCATGGTC
ATAGAGGAACTGCTGAAAGCTACCATCGAAGGCCTGGGTACCCGTGGCGAAGTACCGGTCTTCCCCATACAGATATTCAA
GGTTAAAGACGGAGTATCTTATTCCGAAGAGGACTATAAGAAAGCCATGGAAAACTTCGAAGCGGCACTGGAAGGCAAAA
TGGAATTCCAAGCTCCCAATTTCGACTTGTTTCTGAAAGCCTGCCGTACCACCGCAAAAGCCTTGTTCCCTAATTTTATG
TTTTTGGATACTCCTTATAACAAAAATGAGAAATGGGATATCAAGGACCCTAAACGCTACCGCTATGAACTGGCAACTAT
GGGATGCCGTACCCGCGTATACGAAAATATAGCAGGTGAAAAAAGTTCATTAGGACGTGGCAACCTGTCATTCACCACCA
TGAATATGCCCCGGCTGGCCATCGAAGCACGCATCAAGGCAGAAAGTCTGGAAGAGTCAGGCAAGAAAGAGGCCATAGAA
AGAAAAGCAAAAGAAATATTCATAGAAAGTGTACATGCTTTGTCCGAACTAATCGCCGAACAATTGTATGCACGCTACCA
GTATCAACGTACAGCCTTGGCACGCCAGTTCCCGTTCATGATGGGGAATGATGTGTGGAAAGGCGGAGGAAAACTTTCGC
CCAACGACCAGGTGGGGGATGTATTGCGTCAAGGCACATTAGGGATAGGCTTTATCGGCGGACACAATGCCATGATGGCT
CTTTATGGAGAAGGTCACGCACATAGCCAGAAAGCATGGGATACATTATTCGAAGCCGTTACGGAAATGAATAAAGTGGC
AGACGAATACAAACAGAAATATCAGTTGAATTTCTCCGTACTTGCCACTCCTGCCGAAGGACTTTCCGGACGCTTCACCC
GTATGGACCGCCGCAAATACGGCATCATTCCCGGCGTGACGGATAATGACTATTATGTAAACTCTTTCCACGTAGATGTA
AAAGAGCCCATCACCATCACCGAGAAGATAAAACGGGAAGCTCCTTTCCACGCCATTACCCGCGGAGGGCATATCACTTA
CGTGGAACTGGACGGAGAAGCTCAGAAAAATGTAAAAGCCATAGCCAAGATTGTAAAAGTAATGCATGACGAAGGCATTG
GATACGGTTCCATCAACCATCCTGTTGATACTTGTCAGGCTTGCGGTTACAAAGGAGTCATTTACGACAAGTGCCCTGTT
TGCCAGAGCGAGAATATAATGCGAATGCGTCGCATTACCGGGTATTTGACAGGCGACCTCAGCACTTGGAATTCAGCCAA
GCGTGCTGAAGAACGTGACCGGGTAAAGCATGGATAA

Upstream 100 bases:

>100_bases
AAAACCATTTGCGGGAAGGCGTTTTAAGGGAGAGATAAGTCAGAAAACCTGCCTGGAAGGACAGCCAAGTTTTTTAAATT
AACAATTAATTTTTCAAACA

Downstream 100 bases:

>100_bases
TCAGCATGAACTTGTTATTTACCTATCCTGAAACAATAGTCGACGGTGAAGGCATCCGCTATTCCATCTATCTGGCCGGA
TGCCGTCACCATTGTCGCGG

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MNYAEICIIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSPTISVEEIQDLVEKELMKVRPEVA
KKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSSHTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGD
IHIHDLDYYPTKTTTCIQYDLDDLFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKT
FRKHLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMV
IEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAMENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFM
FLDTPYNKNEKWDIKDPKRYRYELATMGCRTRVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIE
RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGDVLRQGTLGIGFIGGHNAMMA
LYGEGHAHSQKAWDTLFEAVTEMNKVADEYKQKYQLNFSVLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDV
KEPITITEKIKREAPFHAITRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYDKCPV
CQSENIMRMRRITGYLTGDLSTWNSAKRAEERDRVKHG

Sequences:

>Translated_758_residues
MNYAEICIIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSPTISVEEIQDLVEKELMKVRPEVA
KKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSSHTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGD
IHIHDLDYYPTKTTTCIQYDLDDLFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKT
FRKHLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMV
IEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAMENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFM
FLDTPYNKNEKWDIKDPKRYRYELATMGCRTRVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIE
RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGDVLRQGTLGIGFIGGHNAMMA
LYGEGHAHSQKAWDTLFEAVTEMNKVADEYKQKYQLNFSVLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDV
KEPITITEKIKREAPFHAITRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYDKCPV
CQSENIMRMRRITGYLTGDLSTWNSAKRAEERDRVKHG
>Mature_758_residues
MNYAEICIIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSPTISVEEIQDLVEKELMKVRPEVA
KKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNANMSSHTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGD
IHIHDLDYYPTKTTTCIQYDLDDLFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKT
FRKHLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMV
IEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYKKAMENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFM
FLDTPYNKNEKWDIKDPKRYRYELATMGCRTRVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIE
RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGDVLRQGTLGIGFIGGHNAMMA
LYGEGHAHSQKAWDTLFEAVTEMNKVADEYKQKYQLNFSVLATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDV
KEPITITEKIKREAPFHAITRGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYDKCPV
CQSENIMRMRRITGYLTGDLSTWNSAKRAEERDRVKHG

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=769, Percent_Identity=29.6488946684005, Blast_Score=318, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 86265; Mature: 86265

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYAEICIIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSPTIS
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VEEIQDLVEKELMKVRPEVAKKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCC
NMSSHTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGDIHIHDLDYYPTKTTTCIQYD
CCCCCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC
LDDLFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKT
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHH
FRKHLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGN
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QVVFSSINYGTDTSPEGRMVIEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYK
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCHHHHH
KAMENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFMFLDTPYNKNEKWDIKDPKRY
HHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
RYELATMGCRTRVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCHHHHH
VLRQGTLGIGFIGGHNAMMALYGEGHAHSQKAWDTLFEAVTEMNKVADEYKQKYQLNFSV
HHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDVKEPITITEKIKREAPFHAIT
EECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHEE
RGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYDKCPV
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEECCCCC
CQSENIMRMRRITGYLTGDLSTWNSAKRAEERDRVKHG
CCCCCHHHHHHHHHHEECCCHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNYAEICIIKRDGKREDFSISKIKNAIGKAFHASGIDNEDKLIAEITMRVISNFVSPTIS
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VEEIQDLVEKELMKVRPEVAKKYIIYREWRNTERDRKTQMKHIMDGIVAIDKNDVNLSNA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCC
NMSSHTPAGQMMTFASEVTKDYTYKYLLPKKYAEAHQLGDIHIHDLDYYPTKTTTCIQYD
CCCCCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC
LDDLFERGFRTKNGSIRTPQSIQSYATLATIIFQTNQNEQHGGQAIPAFDFFMAEGVRKT
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHH
FRKHLKTLTEFYIEVEGKEPGTEALKKIEEKAYAMTRKDTHQAMEGFIHNLNTMHSRGGN
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QVVFSSINYGTDTSPEGRMVIEELLKATIEGLGTRGEVPVFPIQIFKVKDGVSYSEEDYK
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCHHHHH
KAMENFEAALEGKMEFQAPNFDLFLKACRTTAKALFPNFMFLDTPYNKNEKWDIKDPKRY
HHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHH
RYELATMGCRTRVYENIAGEKSSLGRGNLSFTTMNMPRLAIEARIKAESLEESGKKEAIE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
RKAKEIFIESVHALSELIAEQLYARYQYQRTALARQFPFMMGNDVWKGGGKLSPNDQVGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCHHHHH
VLRQGTLGIGFIGGHNAMMALYGEGHAHSQKAWDTLFEAVTEMNKVADEYKQKYQLNFSV
HHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LATPAEGLSGRFTRMDRRKYGIIPGVTDNDYYVNSFHVDVKEPITITEKIKREAPFHAIT
EECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHEE
RGGHITYVELDGEAQKNVKAIAKIVKVMHDEGIGYGSINHPVDTCQACGYKGVIYDKCPV
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEECCCCC
CQSENIMRMRRITGYLTGDLSTWNSAKRAEERDRVKHG
CCCCCHHHHHHHHHHEECCCHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]