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The map label for this gene is yqfA [C]

Identifier: 150004214

GI number: 150004214

Start: 2139008

End: 2139643

Strand: Reverse

Name: yqfA [C]

Synonym: BVU_1655

Alternate gene names: 150004214

Gene position: 2139643-2139008 (Counterclockwise)

Preceding gene: 150004215

Following gene: 150004213

Centisome position: 41.44

GC content: 47.17

Gene sequence:

>636_bases
TTGACCATACACTATACCAAAGGAGAAGAGTGGGCCAATACCCTGTCACATGGCGTTGGTATCCTGATAGGTATCGCCGG
CGGCGGTTATCTGTTGCTTACTGCCATGAAAAGTGGCAATCCGTGGGCAACAGGCGGCATGTGGCTCTACCTATTCGGTA
TGCTGTCTTCCTATATCAGCTCCACCTGGTATCATGCCAGCAAACCATCTCCTCACCGCGAAGTGTTGCGCAAATTCGAT
CATGCTTCGATTTATCTGCATATCGCAGGCAGCTATTCCCCCATCATGCTGATAGCCTTGCGGGAAGCAGATTATTGGGG
ATGGGGAATTCTTAGTTTCGTATGGCTATGCGCCCTCGCCGGGATCATTCTATGTTTTTGTAACCTGAAAGAACATAGCA
ACCTGGAAACAATTTGCTATATAGCCATGGGATGCAGCATTTTTGTAGGTTTCAAGCCGCTCTGCCAACATGTGCCTCCC
GCTTTTATTTATTGGTTAATCGGTGAAGGAGTGTCTTACATCACCGGAGCTGTCTTTTATTCCTTCCCCAAATTGCCCTA
TATGCACTCTGTTTTCCATCTGTTCGTATTAGGAGGAACGGTCTGCCACATGATGGCATTGTGGTACATTTTATAA

Upstream 100 bases:

>100_bases
ATACTGGATGGAATCATCCCTAATGAACATGATGCTGCTTTAGAACACATGTTGAAGAAAGCAAAAAGCATGGGATTAAC
TCCAAAAAACTTATAAGAAA

Downstream 100 bases:

>100_bases
CCTTCCCATCTTCAATAAGTTATCCGTTTTGGAAAACTTTTATCCATTTTTTAAATAGAAAGTTTCCCAAAATGTTATAC
CTTTGCAGCTGTCCGACAAG

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTIHYTKGEEWANTLSHGVGILIGIAGGGYLLLTAMKSGNPWATGGMWLYLFGMLSSYISSTWYHASKPSPHREVLRKFD
HASIYLHIAGSYSPIMLIALREADYWGWGILSFVWLCALAGIILCFCNLKEHSNLETICYIAMGCSIFVGFKPLCQHVPP
AFIYWLIGEGVSYITGAVFYSFPKLPYMHSVFHLFVLGGTVCHMMALWYIL

Sequences:

>Translated_211_residues
MTIHYTKGEEWANTLSHGVGILIGIAGGGYLLLTAMKSGNPWATGGMWLYLFGMLSSYISSTWYHASKPSPHREVLRKFD
HASIYLHIAGSYSPIMLIALREADYWGWGILSFVWLCALAGIILCFCNLKEHSNLETICYIAMGCSIFVGFKPLCQHVPP
AFIYWLIGEGVSYITGAVFYSFPKLPYMHSVFHLFVLGGTVCHMMALWYIL
>Mature_210_residues
TIHYTKGEEWANTLSHGVGILIGIAGGGYLLLTAMKSGNPWATGGMWLYLFGMLSSYISSTWYHASKPSPHREVLRKFDH
ASIYLHIAGSYSPIMLIALREADYWGWGILSFVWLCALAGIILCFCNLKEHSNLETICYIAMGCSIFVGFKPLCQHVPPA
FIYWLIGEGVSYITGAVFYSFPKLPYMHSVFHLFVLGGTVCHMMALWYIL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=212, Percent_Identity=32.0754716981132, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI154759277, Length=236, Percent_Identity=29.2372881355932, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1789266, Length=205, Percent_Identity=34.6341463414634, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23649; Mature: 23518

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHYTKGEEWANTLSHGVGILIGIAGGGYLLLTAMKSGNPWATGGMWLYLFGMLSSYIS
CEEEECCCHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
STWYHASKPSPHREVLRKFDHASIYLHIAGSYSPIMLIALREADYWGWGILSFVWLCALA
HHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
GIILCFCNLKEHSNLETICYIAMGCSIFVGFKPLCQHVPPAFIYWLIGEGVSYITGAVFY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
SFPKLPYMHSVFHLFVLGGTVCHMMALWYIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TIHYTKGEEWANTLSHGVGILIGIAGGGYLLLTAMKSGNPWATGGMWLYLFGMLSSYIS
EEEECCCHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
STWYHASKPSPHREVLRKFDHASIYLHIAGSYSPIMLIALREADYWGWGILSFVWLCALA
HHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
GIILCFCNLKEHSNLETICYIAMGCSIFVGFKPLCQHVPPAFIYWLIGEGVSYITGAVFY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
SFPKLPYMHSVFHLFVLGGTVCHMMALWYIL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]